RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 LIG1P18858 919 aa8.51□□□□□ -1.05
COPS3-216ENST00000579716 PLAURQ03405 335 aa8.51□□□□□ -1.05
COPS3-216ENST00000579716 SF3A1Q15459 793 aaKnown RBP8.51□□□□□ -1.05
COPS3-216ENST00000579716 LCE3BQ5TA77 95 aa8.51□□□□□ -1.05
COPS3-216ENST00000579716 USP17L2Q6R6M4 530 aa8.51□□□□□ -1.05
COPS3-216ENST00000579716 USP17L1Q7RTZ2 530 aa8.51□□□□□ -1.05
COPS3-216ENST00000579716 BTLAQ7Z6A9 289 aa8.51□□□□□ -1.05
COPS3-216ENST00000579716 KRTAP19-1Q8IUB9 90 aa8.51□□□□□ -1.05
COPS3-216ENST00000579716 ALDH16A1Q8IZ83 802 aa8.51□□□□□ -1.05
COPS3-216ENST00000579716 NUDT8Q8WV74 236 aa8.51□□□□□ -1.05
COPS3-216ENST00000579716 C2orf49Q9BVC5 232 aaPredicted RBP8.51□□□□□ -1.05
COPS3-216ENST00000579716 EIF3JO75822 258 aaKnown RBP8.5□□□□□ -1.05
COPS3-216ENST00000579716 NRG1Q02297 640 aaPredicted RBP8.5□□□□□ -1.05
COPS3-216ENST00000579716 GRIK5Q16478 980 aa8.5□□□□□ -1.05
COPS3-216ENST00000579716 TXNRD3Q86VQ6 643 aa8.5□□□□□ -1.05
COPS3-216ENST00000579716 OGFOD1Q8N543 542 aa8.5□□□□□ -1.05
COPS3-216ENST00000579716 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.5□□□□□ -1.05
COPS3-216ENST00000579716 ANKIB1Q9P2G1 1089 aa8.5□□□□□ -1.05
COPS3-216ENST00000579716 IVNS1ABPQ9Y6Y0 642 aa8.5□□□□□ -1.05
COPS3-216ENST00000579716 CASC1Q6TDU7 716 aa8.49□□□□□ -1.05
COPS3-216ENST00000579716 TRIM50Q86XT4 487 aa8.49□□□□□ -1.05
COPS3-216ENST00000579716 SIX5Q8N196 739 aa8.49□□□□□ -1.05
COPS3-216ENST00000579716 LARGE2Q8N3Y3 721 aa8.49□□□□□ -1.05
COPS3-216ENST00000579716 GAS2L2Q8NHY3 880 aa8.49□□□□□ -1.05
COPS3-216ENST00000579716 KRTAP9-9Q9BYP9 154 aa8.49□□□□□ -1.05
COPS3-216ENST00000579716 KRTAP9-4Q9BYQ2 154 aa8.49□□□□□ -1.05
COPS3-216ENST00000579716 DNAJB12Q9NXW2 375 aaKnown RBP8.49□□□□□ -1.05
COPS3-216ENST00000579716 ATAD2Q6PL18 1390 aa8.48□□□□□ -1.05
COPS3-216ENST00000579716 ZBTB42B2RXF5 422 aa8.48□□□□□ -1.05
COPS3-216ENST00000579716 PEX14O75381 377 aa8.48□□□□□ -1.05
COPS3-216ENST00000579716 AXDND1Q5T1B0 1012 aaPredicted RBP8.48□□□□□ -1.05
COPS3-216ENST00000579716 DMRTC2Q8IXT2 367 aaPredicted RBP8.48□□□□□ -1.05
COPS3-216ENST00000579716 FMR1NBQ8N0W7 255 aaPredicted RBP8.48□□□□□ -1.05
COPS3-216ENST00000579716 STAG2Q8N3U4 1231 aa8.48□□□□□ -1.05
COPS3-216ENST00000579716 JPH1Q9HDC5 661 aaPredicted RBP8.48□□□□□ -1.05
COPS3-216ENST00000579716 MKRN1Q9UHC7 482 aaKnown RBP8.48□□□□□ -1.05
COPS3-216ENST00000579716 USTQ9Y2C2 406 aa8.48□□□□□ -1.05
COPS3-216ENST00000579716 NRDCO43847 1150 aa8.47□□□□□ -1.05
COPS3-216ENST00000579716 PPP1R12BO60237 982 aaPredicted RBP8.47□□□□□ -1.05
COPS3-216ENST00000579716 SH3BP5O60239 455 aa8.47□□□□□ -1.05
COPS3-216ENST00000579716 ZC3H6P61129 1189 aaKnown RBP8.47□□□□□ -1.05
COPS3-216ENST00000579716 NEUROD1Q13562 356 aa8.47□□□□□ -1.05
COPS3-216ENST00000579716 ZFYVE27Q5T4F4 411 aa8.47□□□□□ -1.05
COPS3-216ENST00000579716 HDGFL1Q5TGJ6 251 aa8.47□□□□□ -1.05
COPS3-216ENST00000579716 PSAPL1Q6NUJ1 521 aa8.47□□□□□ -1.05
COPS3-216ENST00000579716 GIMAP6Q6P9H5 292 aa8.47□□□□□ -1.05
COPS3-216ENST00000579716 ZNF662Q6ZS27 426 aa8.47□□□□□ -1.05
COPS3-216ENST00000579716 UBE2OQ9C0C9 1292 aaKnown RBP8.47□□□□□ -1.05
COPS3-216ENST00000579716 IGFLR1Q9H665 355 aa8.47□□□□□ -1.05
COPS3-216ENST00000579716 TTC36A6NLP5 189 aa8.46□□□□□ -1.06
COPS3-216ENST00000579716 ATP9BO43861 1147 aa8.46□□□□□ -1.06
COPS3-216ENST00000579716 CREB3O43889 395 aa8.46□□□□□ -1.06
COPS3-216ENST00000579716 MAP4K4O95819 1239 aaPredicted RBP8.46□□□□□ -1.06
COPS3-216ENST00000579716 FOXD4Q12950 439 aaPredicted RBP8.46□□□□□ -1.06
COPS3-216ENST00000579716 LRP8Q14114 963 aa8.46□□□□□ -1.06
COPS3-216ENST00000579716 CHMP4BQ9H444 224 aaKnown RBP8.46□□□□□ -1.06
COPS3-216ENST00000579716 ZFATQ9P243 1243 aa8.46□□□□□ -1.06
COPS3-216ENST00000579716 PALM3A6NDB9 673 aaPredicted RBP8.45□□□□□ -1.06
COPS3-216ENST00000579716 CCER2I3L3R5 266 aa8.45□□□□□ -1.06
COPS3-216ENST00000579716 ATP1A2P50993 1020 aa8.45□□□□□ -1.06
COPS3-216ENST00000579716 TBC1D8BQ0IIM8 1120 aa8.45□□□□□ -1.06
COPS3-216ENST00000579716 CNGB1Q14028 1251 aaPredicted RBP8.45□□□□□ -1.06
COPS3-216ENST00000579716 TP53INP1Q96A56 240 aa8.45□□□□□ -1.06
COPS3-216ENST00000579716 PPFIA4O75335 1185 aa8.44□□□□□ -1.06
COPS3-216ENST00000579716 NBPF11Q86T75 865 aa8.44□□□□□ -1.06
COPS3-216ENST00000579716 SDR16C5Q8N3Y7 309 aa8.44□□□□□ -1.06
COPS3-216ENST00000579716 ZNF594Q96JF6 807 aaPredicted RBP8.44□□□□□ -1.06
COPS3-216ENST00000579716 JADE2Q9NQC1 790 aa8.44□□□□□ -1.06
COPS3-216ENST00000579716 EXOC5O00471 708 aa8.43□□□□□ -1.06
COPS3-216ENST00000579716 LGR5O75473 907 aa8.43□□□□□ -1.06
COPS3-216ENST00000579716 SCG3Q8WXD2 468 aaKnown RBP8.43□□□□□ -1.06
COPS3-216ENST00000579716 LPIN3Q9BQK8 851 aa8.43□□□□□ -1.06
COPS3-216ENST00000579716 ZRANB2O95218 330 aaKnown RBP eCLIP8.42□□□□□ -1.06
COPS3-216ENST00000579716 NFKB1P19838 968 aa8.42□□□□□ -1.06
COPS3-216ENST00000579716 NOS3P29474 1203 aa8.42□□□□□ -1.06
COPS3-216ENST00000579716 IGBP1P78318 339 aa8.42□□□□□ -1.06
COPS3-216ENST00000579716 CCINQ13939 588 aa8.42□□□□□ -1.06
COPS3-216ENST00000579716 IER5Q5VY09 327 aa8.42□□□□□ -1.06
COPS3-216ENST00000579716 NOP9Q86U38 636 aaKnown RBP8.42□□□□□ -1.06
COPS3-216ENST00000579716 FBXO11Q86XK2 927 aa8.42□□□□□ -1.06
COPS3-216ENST00000579716 WFDC12Q8WWY7 111 aa8.42□□□□□ -1.06
COPS3-216ENST00000579716 NGLY1Q96IV0 654 aa8.42□□□□□ -1.06
COPS3-216ENST00000579716 EFCC1Q9HA90 598 aa8.42□□□□□ -1.06
COPS3-216ENST00000579716 DEAF1O75398 565 aaPredicted RBP8.41□□□□□ -1.06
COPS3-216ENST00000579716 INPP5BP32019 993 aa8.41□□□□□ -1.06
COPS3-216ENST00000579716 RAC1P63000 192 aa8.41□□□□□ -1.06
COPS3-216ENST00000579716 HSP90AB2PQ58FF8 381 aa8.41□□□□□ -1.06
COPS3-216ENST00000579716 PERM1Q5SV97 790 aa8.41□□□□□ -1.06
COPS3-216ENST00000579716 MSL1Q68DK7 614 aa8.41□□□□□ -1.06
COPS3-216ENST00000579716 RGS9O75916 674 aaPredicted RBP8.4□□□□□ -1.06
COPS3-216ENST00000579716 IREB2P48200 963 aaKnown RBP8.4□□□□□ -1.06
COPS3-216ENST00000579716 CLEC4GQ6UXB4 293 aa8.4□□□□□ -1.06
COPS3-216ENST00000579716 CACTIN-AS1Q8N1I8 211 aa8.4□□□□□ -1.06
COPS3-216ENST00000579716 ANP32BQ92688 251 aaKnown RBP8.4□□□□□ -1.06
COPS3-216ENST00000579716 IFT43Q96FT9 208 aa8.4□□□□□ -1.06
COPS3-216ENST00000579716 MEGF10Q96KG7 1140 aa8.4□□□□□ -1.06
COPS3-216ENST00000579716 MAF1Q9H063 256 aa8.4□□□□□ -1.06
COPS3-216ENST00000579716 PNMA2Q9UL42 364 aa8.4□□□□□ -1.06
COPS3-216ENST00000579716 TMA7Q9Y2S6 64 aaKnown RBP8.4□□□□□ -1.06
COPS3-216ENST00000579716 RPS6KL1Q9Y6S9 549 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms