RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 DPP8Q6V1X1 898 aaPredicted RBP9.58□□□□□ -0.88
CDK5RAP3-209ENST00000578663 KIF6Q6ZMV9 814 aa9.58□□□□□ -0.88
CDK5RAP3-209ENST00000578663 UBE2Q1Q7Z7E8 422 aa9.58□□□□□ -0.88
CDK5RAP3-209ENST00000578663 MICALL2Q8IY33 904 aa9.58□□□□□ -0.88
CDK5RAP3-209ENST00000578663 NLRP3Q96P20 1036 aa9.58□□□□□ -0.88
CDK5RAP3-209ENST00000578663 ZBTB12Q9Y330 459 aaPredicted RBP9.58□□□□□ -0.88
CDK5RAP3-209ENST00000578663 DDX60Q8IY21 1712 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-209ENST00000578663 DUOX1Q9NRD9 1551 aa9.58□□□□□ -0.88
CDK5RAP3-209ENST00000578663 ANKRD36CQ5JPF3 1778 aa9.58□□□□□ -0.88
CDK5RAP3-209ENST00000578663 ABCC4O15439 1325 aa9.57□□□□□ -0.88
CDK5RAP3-209ENST00000578663 HTATSF1O43719 755 aaKnown RBP9.57□□□□□ -0.88
CDK5RAP3-209ENST00000578663 BBOX1O75936 387 aa9.57□□□□□ -0.88
CDK5RAP3-209ENST00000578663 RAD17O75943 681 aa9.57□□□□□ -0.88
CDK5RAP3-209ENST00000578663 RPS12P25398 132 aaKnown RBP9.57□□□□□ -0.88
CDK5RAP3-209ENST00000578663 SLC4A8Q2Y0W8 1093 aa9.57□□□□□ -0.88
CDK5RAP3-209ENST00000578663 SLC10A5Q5PT55 438 aa9.57□□□□□ -0.88
CDK5RAP3-209ENST00000578663 SUSD4Q5VX71 490 aa9.57□□□□□ -0.88
CDK5RAP3-209ENST00000578663 PPP1R42Q7Z4L9 355 aa9.57□□□□□ -0.88
CDK5RAP3-209ENST00000578663 SP8Q8IXZ3 490 aa9.57□□□□□ -0.88
CDK5RAP3-209ENST00000578663 ZNF34Q8IZ26 560 aa9.57□□□□□ -0.88
CDK5RAP3-209ENST00000578663 RTF1Q92541 710 aaKnown RBP9.57□□□□□ -0.88
CDK5RAP3-209ENST00000578663 CDH23Q9H251 3354 aa9.57□□□□□ -0.88
CDK5RAP3-209ENST00000578663 YDJCA8MPS7 323 aa9.56□□□□□ -0.88
CDK5RAP3-209ENST00000578663 GPTP24298 496 aa9.56□□□□□ -0.88
CDK5RAP3-209ENST00000578663 PRKAR2BP31323 418 aa9.56□□□□□ -0.88
CDK5RAP3-209ENST00000578663 ZEB1P37275 1124 aaPredicted RBP9.56□□□□□ -0.88
CDK5RAP3-209ENST00000578663 FKBP1BP68106 108 aa9.56□□□□□ -0.88
CDK5RAP3-209ENST00000578663 LRIT3Q3SXY7 679 aa9.56□□□□□ -0.88
CDK5RAP3-209ENST00000578663 GIGYF2Q6Y7W6 1299 aaKnown RBP9.56□□□□□ -0.88
CDK5RAP3-209ENST00000578663 C3orf67Q6ZVT6 689 aa9.56□□□□□ -0.88
CDK5RAP3-209ENST00000578663 MOB2Q70IA6 237 aa9.56□□□□□ -0.88
CDK5RAP3-209ENST00000578663 TMC4Q7Z404 712 aa9.56□□□□□ -0.88
CDK5RAP3-209ENST00000578663 CD99L2Q8TCZ2 262 aa9.56□□□□□ -0.88
CDK5RAP3-209ENST00000578663 PHACTR3Q96KR7 559 aa9.56□□□□□ -0.88
CDK5RAP3-209ENST00000578663 RSPH6AQ9H0K4 717 aa9.56□□□□□ -0.88
CDK5RAP3-209ENST00000578663 LAMB2P55268 1798 aa9.55□□□□□ -0.88
CDK5RAP3-209ENST00000578663 TCERG1O14776 1098 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP3-209ENST00000578663 MYCP01106 439 aaPredicted RBP9.55□□□□□ -0.88
CDK5RAP3-209ENST00000578663 BCAMP50895 628 aa9.55□□□□□ -0.88
CDK5RAP3-209ENST00000578663 SAMD7Q7Z3H4 446 aa9.55□□□□□ -0.88
CDK5RAP3-209ENST00000578663 SYMPKQ92797 1274 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP3-209ENST00000578663 DCPSQ96C86 337 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP3-209ENST00000578663 CDCA5Q96FF9 252 aa9.55□□□□□ -0.88
CDK5RAP3-209ENST00000578663 SSC5DA1L4H1 1573 aa9.54□□□□□ -0.88
CDK5RAP3-209ENST00000578663 PER1O15534 1290 aaPredicted RBP9.54□□□□□ -0.88
CDK5RAP3-209ENST00000578663 MKRN3Q13064 507 aaKnown RBP9.54□□□□□ -0.88
CDK5RAP3-209ENST00000578663 TAF7Q15545 349 aaPredicted RBP9.54□□□□□ -0.88
CDK5RAP3-209ENST00000578663 TTLL7Q6ZT98 887 aa9.54□□□□□ -0.88
CDK5RAP3-209ENST00000578663 MCM10Q7L590 875 aa9.54□□□□□ -0.88
CDK5RAP3-209ENST00000578663 SULF1Q8IWU6 871 aa9.54□□□□□ -0.88
CDK5RAP3-209ENST00000578663 GDF15Q99988 308 aa9.54□□□□□ -0.88
CDK5RAP3-209ENST00000578663 NR2E3Q9Y5X4 410 aa9.54□□□□□ -0.88
CDK5RAP3-209ENST00000578663 PSMD14O00487 310 aa9.53□□□□□ -0.88
CDK5RAP3-209ENST00000578663 BMP8BP34820 402 aa9.53□□□□□ -0.88
CDK5RAP3-209ENST00000578663 GRAPQ13588 217 aa9.53□□□□□ -0.88
CDK5RAP3-209ENST00000578663 TBC1D10BQ4KMP7 808 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-209ENST00000578663 GRAPLQ8TC17 118 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-209ENST00000578663 PNISRQ8TF01 805 aaKnown RBP9.53□□□□□ -0.88
CDK5RAP3-209ENST00000578663 NECTIN2Q92692 538 aa9.53□□□□□ -0.88
CDK5RAP3-209ENST00000578663 ERO1AQ96HE7 468 aa9.53□□□□□ -0.88
CDK5RAP3-209ENST00000578663 UTP14AQ9BVJ6 771 aaKnown RBP9.53□□□□□ -0.88
CDK5RAP3-209ENST00000578663 ZBTB3Q9H5J0 574 aa9.53□□□□□ -0.88
CDK5RAP3-209ENST00000578663 EFCC1Q9HA90 598 aa9.53□□□□□ -0.88
CDK5RAP3-209ENST00000578663 GGA3Q9NZ52 723 aa9.53□□□□□ -0.88
CDK5RAP3-209ENST00000578663 ARIH1Q9Y4X5 557 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-209ENST00000578663 PTCH2Q9Y6C5 1203 aa9.53□□□□□ -0.88
CDK5RAP3-209ENST00000578663 ASTN2O75129 1339 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-209ENST00000578663 KIF4BQ2VIQ3 1234 aa9.52□□□□□ -0.89
CDK5RAP3-209ENST00000578663 SLC9C1Q4G0N8 1177 aa9.52□□□□□ -0.89
CDK5RAP3-209ENST00000578663 DDX46Q7L014 1031 aaKnown RBP9.52□□□□□ -0.89
CDK5RAP3-209ENST00000578663 ALYREFQ86V81 257 aaKnown RBP9.52□□□□□ -0.89
CDK5RAP3-209ENST00000578663 HTATIP2Q9BUP3 242 aa9.52□□□□□ -0.89
CDK5RAP3-209ENST00000578663 UBE2Q2LH0YL09 131 aa9.51□□□□□ -0.89
CDK5RAP3-209ENST00000578663 SREBF2Q12772 1141 aa9.51□□□□□ -0.89
CDK5RAP3-209ENST00000578663 CC2D1BQ5T0F9 858 aaKnown RBP9.51□□□□□ -0.89
CDK5RAP3-209ENST00000578663 NGEFQ8N5V2 710 aa9.51□□□□□ -0.89
CDK5RAP3-209ENST00000578663 CFAP53Q96M91 514 aa9.51□□□□□ -0.89
CDK5RAP3-209ENST00000578663 NUDCQ9Y266 331 aa9.51□□□□□ -0.89
CDK5RAP3-209ENST00000578663 RRP7AQ9Y3A4 280 aaKnown RBP9.51□□□□□ -0.89
CDK5RAP3-209ENST00000578663 RTL9Q8NET4 1388 aa9.5□□□□□ -0.89
CDK5RAP3-209ENST00000578663 POTEB2H3BUK9 544 aa9.5□□□□□ -0.89
CDK5RAP3-209ENST00000578663 WASHC4Q2M389 1173 aa9.5□□□□□ -0.89
CDK5RAP3-209ENST00000578663 HSP90AB3PQ58FF7 597 aa9.5□□□□□ -0.89
CDK5RAP3-209ENST00000578663 LRP10Q7Z4F1 713 aa9.5□□□□□ -0.89
CDK5RAP3-209ENST00000578663 NBPF11Q86T75 865 aa9.5□□□□□ -0.89
CDK5RAP3-209ENST00000578663 SH3TC2Q8TF17 1288 aa9.5□□□□□ -0.89
CDK5RAP3-209ENST00000578663 IRS2Q9Y4H2 1338 aa9.5□□□□□ -0.89
CDK5RAP3-209ENST00000578663 PSME4Q14997 1843 aa9.49□□□□□ -0.89
CDK5RAP3-209ENST00000578663 COL2A1P02458 1487 aaPredicted RBP9.49□□□□□ -0.89
CDK5RAP3-209ENST00000578663 ECE2O60344 883 aa9.49□□□□□ -0.89
CDK5RAP3-209ENST00000578663 ALDH1A1P00352 501 aa9.49□□□□□ -0.89
CDK5RAP3-209ENST00000578663 VIL1P09327 827 aaKnown RBP9.49□□□□□ -0.89
CDK5RAP3-209ENST00000578663 MYL6BP14649 208 aa9.49□□□□□ -0.89
CDK5RAP3-209ENST00000578663 ZNF280AP59817 542 aaPredicted RBP9.49□□□□□ -0.89
CDK5RAP3-209ENST00000578663 EIF4A1P60842 406 aaKnown RBP9.49□□□□□ -0.89
CDK5RAP3-209ENST00000578663 DCTN1Q14203 1278 aa9.49□□□□□ -0.89
CDK5RAP3-209ENST00000578663 MAFAQ8NHW3 353 aaPredicted RBP9.49□□□□□ -0.89
CDK5RAP3-209ENST00000578663 EYA3Q99504 573 aa9.49□□□□□ -0.89
CDK5RAP3-209ENST00000578663 DBNDD1Q9H9R9 158 aa9.49□□□□□ -0.89
CDK5RAP3-209ENST00000578663 SCN9AQ15858 1988 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms