RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 UTRNP46939 3433 aa16.49■□□□□ 0.23
SRSF1-202ENST00000578430 IFIT2P09913 472 aaKnown RBP16.48■□□□□ 0.23
SRSF1-202ENST00000578430 MX1P20591 662 aa16.48■□□□□ 0.23
SRSF1-202ENST00000578430 PDE6BP35913 854 aa16.48■□□□□ 0.23
SRSF1-202ENST00000578430 TFCP2Q12800 502 aa16.48■□□□□ 0.23
SRSF1-202ENST00000578430 MSL1Q68DK7 614 aa16.48■□□□□ 0.23
SRSF1-202ENST00000578430 C16orf71Q8IYS4 520 aaPredicted RBP16.48■□□□□ 0.23
SRSF1-202ENST00000578430 PUS3Q9BZE2 481 aaKnown RBP16.48■□□□□ 0.23
SRSF1-202ENST00000578430 TNRC6CQ9HCJ0 1690 aaKnown RBP16.47■□□□□ 0.23
SRSF1-202ENST00000578430 HOXA10P31260 410 aaPredicted RBP16.47■□□□□ 0.23
SRSF1-202ENST00000578430 PDE1AP54750 535 aa16.47■□□□□ 0.23
SRSF1-202ENST00000578430 RPS8P62241 208 aaKnown RBP16.47■□□□□ 0.23
SRSF1-202ENST00000578430 TNNI3KQ59H18 835 aa16.47■□□□□ 0.23
SRSF1-202ENST00000578430 METTL24Q5JXM2 366 aa16.47■□□□□ 0.23
SRSF1-202ENST00000578430 AACSQ86V21 672 aa16.47■□□□□ 0.23
SRSF1-202ENST00000578430 RPGRQ92834 1020 aaKnown RBP16.47■□□□□ 0.23
SRSF1-202ENST00000578430 RBM17Q96I25 401 aaKnown RBP16.47■□□□□ 0.23
SRSF1-202ENST00000578430 FHDC1Q9C0D6 1143 aaPredicted RBP16.47■□□□□ 0.23
SRSF1-202ENST00000578430 BSDC1Q9NW68 430 aaPredicted RBP16.47■□□□□ 0.23
SRSF1-202ENST00000578430 FPGT-TNNI3KV9GXZ4 949 aa16.47■□□□□ 0.23
SRSF1-202ENST00000578430 TTC41PQ6P2S7 1318 aa16.46■□□□□ 0.23
SRSF1-202ENST00000578430 GRAPQ13588 217 aa16.46■□□□□ 0.23
SRSF1-202ENST00000578430 BMP2KLQ5H9B9 411 aa16.46■□□□□ 0.23
SRSF1-202ENST00000578430 CCDC24Q8N4L8 307 aa16.46■□□□□ 0.23
SRSF1-202ENST00000578430 GRAPLQ8TC17 118 aaPredicted RBP16.46■□□□□ 0.23
SRSF1-202ENST00000578430 EAF2Q96CJ1 260 aaPredicted RBP16.46■□□□□ 0.23
SRSF1-202ENST00000578430 CHD4Q14839 1912 aa16.46■□□□□ 0.23
SRSF1-202ENST00000578430 TMC4Q7Z404 712 aa16.45■□□□□ 0.22
SRSF1-202ENST00000578430 OTUD7AQ8TE49 926 aaPredicted RBP16.45■□□□□ 0.22
SRSF1-202ENST00000578430 CRAMP1Q96RY5 1269 aa16.45■□□□□ 0.22
SRSF1-202ENST00000578430 SYT17Q9BSW7 474 aa16.45■□□□□ 0.22
SRSF1-202ENST00000578430 MTFR1LQ9H019 292 aa16.45■□□□□ 0.22
SRSF1-202ENST00000578430 ERC2O15083 957 aa16.44■□□□□ 0.22
SRSF1-202ENST00000578430 PDE8BO95263 885 aa16.44■□□□□ 0.22
SRSF1-202ENST00000578430 NPR1P16066 1061 aa16.44■□□□□ 0.22
SRSF1-202ENST00000578430 TTC22Q5TAA0 569 aa16.44■□□□□ 0.22
SRSF1-202ENST00000578430 VGLL2Q8N8G2 317 aa16.44■□□□□ 0.22
SRSF1-202ENST00000578430 SGIP1Q9BQI5 828 aa16.44■□□□□ 0.22
SRSF1-202ENST00000578430 ECHDC1Q9NTX5 307 aa16.44■□□□□ 0.22
SRSF1-202ENST00000578430 ZNF609O15014 1411 aa16.44■□□□□ 0.22
SRSF1-202ENST00000578430 CAPN15O75808 1086 aa16.43■□□□□ 0.22
SRSF1-202ENST00000578430 BBOX1O75936 387 aa16.43■□□□□ 0.22
SRSF1-202ENST00000578430 GLRX3O76003 335 aaKnown RBP16.43■□□□□ 0.22
SRSF1-202ENST00000578430 PUM3Q15397 648 aaKnown RBP16.43■□□□□ 0.22
SRSF1-202ENST00000578430 ZNF784Q8NCA9 323 aaPredicted RBP16.43■□□□□ 0.22
SRSF1-202ENST00000578430 CELF1Q92879 486 aaKnown RBP16.43■□□□□ 0.22
SRSF1-202ENST00000578430 ANKRD2Q9GZV1 360 aa16.43■□□□□ 0.22
SRSF1-202ENST00000578430 ANKRD31Q8N7Z5 1873 aa16.43■□□□□ 0.22
SRSF1-202ENST00000578430 A0A1B0GUL7 405 aa16.42■□□□□ 0.22
SRSF1-202ENST00000578430 SRGNP10124 158 aa16.42■□□□□ 0.22
SRSF1-202ENST00000578430 POLD1P28340 1107 aa16.42■□□□□ 0.22
SRSF1-202ENST00000578430 ATP2B3Q16720 1220 aa16.42■□□□□ 0.22
SRSF1-202ENST00000578430 CCDC8Q9H0W5 538 aaPredicted RBP16.42■□□□□ 0.22
SRSF1-202ENST00000578430 BCL11AQ9H165 835 aa16.42■□□□□ 0.22
SRSF1-202ENST00000578430 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.42■□□□□ 0.22
SRSF1-202ENST00000578430 ALDH1B1P30837 517 aa16.41■□□□□ 0.22
SRSF1-202ENST00000578430 CHRNDQ07001 517 aa16.41■□□□□ 0.22
SRSF1-202ENST00000578430 LPIN2Q92539 896 aa16.41■□□□□ 0.22
SRSF1-202ENST00000578430 MASTLQ96GX5 879 aa16.41■□□□□ 0.22
SRSF1-202ENST00000578430 DBNLQ9UJU6 430 aaKnown RBP16.41■□□□□ 0.22
SRSF1-202ENST00000578430 MINPP1Q9UNW1 487 aa16.41■□□□□ 0.22
SRSF1-202ENST00000578430 C10orf71Q711Q0 1435 aa16.4■□□□□ 0.22
SRSF1-202ENST00000578430 H0YIN7 160 aa16.4■□□□□ 0.22
SRSF1-202ENST00000578430 SLC5A1P13866 664 aa16.4■□□□□ 0.22
SRSF1-202ENST00000578430 FGFR2P21802 821 aa16.4■□□□□ 0.22
SRSF1-202ENST00000578430 UBE4AQ14139 1066 aa16.4■□□□□ 0.22
SRSF1-202ENST00000578430 STYK1Q6J9G0 422 aa16.4■□□□□ 0.22
SRSF1-202ENST00000578430 PI4K2BQ8TCG2 481 aa16.4■□□□□ 0.22
SRSF1-202ENST00000578430 NEUROD6Q96NK8 337 aa16.4■□□□□ 0.22
SRSF1-202ENST00000578430 SPEF2Q9C093 1822 aa16.4■□□□□ 0.22
SRSF1-202ENST00000578430 IFIT1P09914 478 aaKnown RBP16.39■□□□□ 0.21
SRSF1-202ENST00000578430 ATP5JP18859 108 aa16.39■□□□□ 0.21
SRSF1-202ENST00000578430 TIMM10P62072 90 aa16.39■□□□□ 0.21
SRSF1-202ENST00000578430 DBNDD2Q9BQY9 259 aa16.39■□□□□ 0.21
SRSF1-202ENST00000578430 EIF5BO60841 1220 aaKnown RBP16.38■□□□□ 0.21
SRSF1-202ENST00000578430 GSPT1P15170 499 aaKnown RBP16.38■□□□□ 0.21
SRSF1-202ENST00000578430 DSG3P32926 999 aa16.38■□□□□ 0.21
SRSF1-202ENST00000578430 CCDC158Q5M9N0 1113 aa16.38■□□□□ 0.21
SRSF1-202ENST00000578430 GORABQ5T7V8 394 aa16.38■□□□□ 0.21
SRSF1-202ENST00000578430 C2CD5Q86YS7 1000 aa16.38■□□□□ 0.21
SRSF1-202ENST00000578430 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.38■□□□□ 0.21
SRSF1-202ENST00000578430 XAGE2Q96GT9 111 aa16.38■□□□□ 0.21
SRSF1-202ENST00000578430 TLR7Q9NYK1 1049 aaKnown RBP16.38■□□□□ 0.21
SRSF1-202ENST00000578430 TAF1P21675 1872 aa16.37■□□□□ 0.21
SRSF1-202ENST00000578430 COL4A1P02462 1669 aa16.37■□□□□ 0.21
SRSF1-202ENST00000578430 HELBQ8NG08 1087 aaPredicted RBP16.37■□□□□ 0.21
SRSF1-202ENST00000578430 CNKSR1Q969H4 720 aa16.37■□□□□ 0.21
SRSF1-202ENST00000578430 ZNF512BQ96KM6 892 aaPredicted RBP16.37■□□□□ 0.21
SRSF1-202ENST00000578430 LEMD3Q9Y2U8 911 aa16.37■□□□□ 0.21
SRSF1-202ENST00000578430 ARAP2Q8WZ64 1704 aa16.36■□□□□ 0.21
SRSF1-202ENST00000578430 SDSP20132 328 aa16.36■□□□□ 0.21
SRSF1-202ENST00000578430 TICAM2Q86XR7 235 aa16.36■□□□□ 0.21
SRSF1-202ENST00000578430 SP8Q8IXZ3 490 aa16.36■□□□□ 0.21
SRSF1-202ENST00000578430 XDHP47989 1333 aa16.36■□□□□ 0.21
SRSF1-202ENST00000578430 A0A1B0GUL6 1792 aa16.36■□□□□ 0.21
SRSF1-202ENST00000578430 PPEF1O14829 653 aaPredicted RBP16.35■□□□□ 0.21
SRSF1-202ENST00000578430 TAF5LO75529 589 aa16.35■□□□□ 0.21
SRSF1-202ENST00000578430 UQCRFS1P1P0C7P4 283 aa16.35■□□□□ 0.21
SRSF1-202ENST00000578430 TSHZ3Q63HK5 1081 aa16.35■□□□□ 0.21
SRSF1-202ENST00000578430 CNTROBQ8N137 903 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms