RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 TM6SF1Q9BZW5 370 aa33.28■■■□□ 2.92
LIMD2-203ENST00000578067 BTAF1O14981 1849 aa33.28■■■□□ 2.92
LIMD2-203ENST00000578067 TAF5LO75529 589 aa33.28■■■□□ 2.92
LIMD2-203ENST00000578067 DEKP35659 375 aaKnown RBP33.28■■■□□ 2.92
LIMD2-203ENST00000578067 FAM182BQ5T319 152 aa33.28■■■□□ 2.92
LIMD2-203ENST00000578067 ZGPATQ8N5A5 531 aaKnown RBP33.28■■■□□ 2.92
LIMD2-203ENST00000578067 TTC14Q96N46 770 aa33.28■■■□□ 2.92
LIMD2-203ENST00000578067 BCORQ6W2J9 1755 aa33.27■■■□□ 2.92
LIMD2-203ENST00000578067 MCMDC2Q4G0Z9 681 aa33.27■■■□□ 2.92
LIMD2-203ENST00000578067 RC3H1Q5TC82 1133 aaKnown RBP33.27■■■□□ 2.92
LIMD2-203ENST00000578067 SPEF2Q9C093 1822 aa33.26■■■□□ 2.92
LIMD2-203ENST00000578067 NUCB2P80303 420 aa33.26■■■□□ 2.92
LIMD2-203ENST00000578067 ONECUT3O60422 494 aaPredicted RBP33.26■■■□□ 2.91
LIMD2-203ENST00000578067 NOL8Q76FK4 1167 aaKnown RBP33.26■■■□□ 2.91
LIMD2-203ENST00000578067 VGLL2Q8N8G2 317 aa33.26■■■□□ 2.91
LIMD2-203ENST00000578067 ATRNO75882 1429 aa33.25■■■□□ 2.91
LIMD2-203ENST00000578067 CASTP20810 708 aaKnown RBP33.25■■■□□ 2.91
LIMD2-203ENST00000578067 TRPC5Q9UL62 973 aaPredicted RBP33.25■■■□□ 2.91
LIMD2-203ENST00000578067 SLC27A2O14975 620 aa33.24■■■□□ 2.91
LIMD2-203ENST00000578067 RGL2O15211 777 aa33.24■■■□□ 2.91
LIMD2-203ENST00000578067 RNF20Q5VTR2 975 aa33.24■■■□□ 2.91
LIMD2-203ENST00000578067 JAKMIP1Q96N16 626 aaKnown RBP33.24■■■□□ 2.91
LIMD2-203ENST00000578067 INTS4Q96HW7 963 aaKnown RBP33.24■■■□□ 2.91
LIMD2-203ENST00000578067 GBP4Q96PP9 640 aa33.24■■■□□ 2.91
LIMD2-203ENST00000578067 ZSWIM6Q9HCJ5 1215 aa33.24■■■□□ 2.91
LIMD2-203ENST00000578067 LRP5O75197 1615 aa33.23■■■□□ 2.91
LIMD2-203ENST00000578067 ABCC12Q96J65 1359 aa33.23■■■□□ 2.91
LIMD2-203ENST00000578067 PDE8BO95263 885 aa33.23■■■□□ 2.91
LIMD2-203ENST00000578067 CHGBP05060 677 aa33.23■■■□□ 2.91
LIMD2-203ENST00000578067 ADCK5Q3MIX3 580 aa33.23■■■□□ 2.91
LIMD2-203ENST00000578067 HELLSQ9NRZ9 838 aa33.23■■■□□ 2.91
LIMD2-203ENST00000578067 SSFA2P28290 1259 aa33.23■■■□□ 2.91
LIMD2-203ENST00000578067 SEC62Q99442 399 aaKnown RBP33.23■■■□□ 2.91
LIMD2-203ENST00000578067 MROH5Q6ZUA9 1318 aa33.22■■■□□ 2.91
LIMD2-203ENST00000578067 CCDC152Q4G0S7 254 aa33.22■■■□□ 2.91
LIMD2-203ENST00000578067 USPL1Q5W0Q7 1092 aa33.22■■■□□ 2.91
LIMD2-203ENST00000578067 AK2P54819 239 aa33.21■■■□□ 2.91
LIMD2-203ENST00000578067 FKBP4Q02790 459 aaKnown RBP eCLIP33.21■■■□□ 2.91
LIMD2-203ENST00000578067 CYP46A1Q9Y6A2 500 aa33.21■■■□□ 2.91
LIMD2-203ENST00000578067 DDX60Q8IY21 1712 aaKnown RBP33.21■■■□□ 2.91
LIMD2-203ENST00000578067 DDX11L8A8MPP1 907 aa33.21■■■□□ 2.91
LIMD2-203ENST00000578067 RPS6KA4O75676 772 aa33.21■■■□□ 2.91
LIMD2-203ENST00000578067 HMG20BQ9P0W2 317 aa33.21■■■□□ 2.91
LIMD2-203ENST00000578067 CCNL1Q9UK58 526 aaPredicted RBP33.21■■■□□ 2.91
LIMD2-203ENST00000578067 RTL9Q8NET4 1388 aa33.2■■■□□ 2.91
LIMD2-203ENST00000578067 CCDC129Q6ZRS4 1044 aa33.2■■■□□ 2.91
LIMD2-203ENST00000578067 ZMYM1Q5SVZ6 1142 aa33.19■■■□□ 2.9
LIMD2-203ENST00000578067 VPS53Q5VIR6 699 aa33.19■■■□□ 2.9
LIMD2-203ENST00000578067 RNF113AO15541 343 aaKnown RBP33.19■■■□□ 2.9
LIMD2-203ENST00000578067 CYP2E1P05181 493 aaPredicted RBP33.19■■■□□ 2.9
LIMD2-203ENST00000578067 PSMA5P28066 241 aa33.19■■■□□ 2.9
LIMD2-203ENST00000578067 GSE1Q14687 1217 aa33.19■■■□□ 2.9
LIMD2-203ENST00000578067 LRRFIP1Q32MZ4 808 aaKnown RBP33.19■■■□□ 2.9
LIMD2-203ENST00000578067 SEPT12Q8IYM1 358 aa33.19■■■□□ 2.9
LIMD2-203ENST00000578067 LAMB2P55268 1798 aa33.19■■■□□ 2.9
LIMD2-203ENST00000578067 CPA1P15085 419 aa33.18■■■□□ 2.9
LIMD2-203ENST00000578067 TSGA10IPQ3SY00 556 aa33.18■■■□□ 2.9
LIMD2-203ENST00000578067 RUFY3Q7L099 469 aa33.18■■■□□ 2.9
LIMD2-203ENST00000578067 PDRG1Q9NUG6 133 aa33.18■■■□□ 2.9
LIMD2-203ENST00000578067 LIMCH1Q9UPQ0 1083 aa33.18■■■□□ 2.9
LIMD2-203ENST00000578067 U3KPZ7 1027 aaPredicted RBP33.18■■■□□ 2.9
LIMD2-203ENST00000578067 CLEC17AQ6ZS10 378 aa33.18■■■□□ 2.9
LIMD2-203ENST00000578067 ZNF512BQ96KM6 892 aaPredicted RBP33.18■■■□□ 2.9
LIMD2-203ENST00000578067 SEC31BQ9NQW1 1179 aa33.18■■■□□ 2.9
LIMD2-203ENST00000578067 RPAP1Q9BWH6 1393 aaPredicted RBP33.17■■■□□ 2.9
LIMD2-203ENST00000578067 SCARF1Q14162 830 aa33.17■■■□□ 2.9
LIMD2-203ENST00000578067 MPHOSPH8Q99549 860 aa33.17■■■□□ 2.9
LIMD2-203ENST00000578067 NARFQ9UHQ1 456 aa33.16■■■□□ 2.9
LIMD2-203ENST00000578067 PUM3Q15397 648 aaKnown RBP33.16■■■□□ 2.9
LIMD2-203ENST00000578067 SCN7AQ01118 1682 aa33.15■■■□□ 2.9
LIMD2-203ENST00000578067 ZAP70P43403 619 aa33.15■■■□□ 2.9
LIMD2-203ENST00000578067 GNPATO15228 680 aa33.14■■■□□ 2.9
LIMD2-203ENST00000578067 LPIN2Q92539 896 aa33.14■■■□□ 2.9
LIMD2-203ENST00000578067 FGFR2P21802 821 aa33.14■■■□□ 2.9
LIMD2-203ENST00000578067 SLFNL1Q499Z3 407 aa33.14■■■□□ 2.9
LIMD2-203ENST00000578067 BCL2L12Q9HB09 334 aa33.14■■■□□ 2.9
LIMD2-203ENST00000578067 IGHMBP2P38935 993 aaKnown RBP33.13■■■□□ 2.89
LIMD2-203ENST00000578067 PKP1Q13835 747 aa33.13■■■□□ 2.89
LIMD2-203ENST00000578067 ERFEQ4G0M1 354 aa33.13■■■□□ 2.89
LIMD2-203ENST00000578067 SMIM5Q71RC9 77 aa33.13■■■□□ 2.89
LIMD2-203ENST00000578067 ZFYP08048 801 aaPredicted RBP33.12■■■□□ 2.89
LIMD2-203ENST00000578067 HELBQ8NG08 1087 aaPredicted RBP33.12■■■□□ 2.89
LIMD2-203ENST00000578067 RTCBQ9Y3I0 505 aaKnown RBP33.12■■■□□ 2.89
LIMD2-203ENST00000578067 LY75O60449 1722 aa33.12■■■□□ 2.89
LIMD2-203ENST00000578067 KRT32Q14532 448 aa33.12■■■□□ 2.89
LIMD2-203ENST00000578067 TBC1D9BQ66K14 1250 aa33.12■■■□□ 2.89
LIMD2-203ENST00000578067 QTRT2Q9H974 415 aaKnown RBP33.12■■■□□ 2.89
LIMD2-203ENST00000578067 SBF2Q86WG5 1849 aa33.12■■■□□ 2.89
LIMD2-203ENST00000578067 MCAMP43121 646 aa33.11■■■□□ 2.89
LIMD2-203ENST00000578067 DSCC1Q9BVC3 393 aa33.11■■■□□ 2.89
LIMD2-203ENST00000578067 BLOC1S2Q6QNY1 142 aa33.11■■■□□ 2.89
LIMD2-203ENST00000578067 MAST3O60307 1309 aa33.1■■■□□ 2.89
LIMD2-203ENST00000578067 ZPR1O75312 459 aa33.1■■■□□ 2.89
LIMD2-203ENST00000578067 BICDL1Q6ZP65 573 aa33.1■■■□□ 2.89
LIMD2-203ENST00000578067 TAF6LQ9Y6J9 622 aa33.1■■■□□ 2.89
LIMD2-203ENST00000578067 UQCRFS1P1P0C7P4 283 aa33.09■■■□□ 2.89
LIMD2-203ENST00000578067 SLC5A1P13866 664 aa33.09■■■□□ 2.89
LIMD2-203ENST00000578067 PTMSP20962 102 aa33.09■■■□□ 2.89
LIMD2-203ENST00000578067 CCDC102BQ68D86 513 aa33.09■■■□□ 2.89
LIMD2-203ENST00000578067 PI16Q6UXB8 463 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms