RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 DEFB132Q7Z7B7 95 aa22.64■■□□□ 1.21
PRKCA-203ENST00000578063 CCDC125Q86Z20 511 aa22.64■■□□□ 1.21
PRKCA-203ENST00000578063 RILPL2Q969X0 211 aa22.64■■□□□ 1.21
PRKCA-203ENST00000578063 NEUROD6Q96NK8 337 aa22.64■■□□□ 1.21
PRKCA-203ENST00000578063 ANO8Q9HCE9 1232 aaPredicted RBP22.64■■□□□ 1.21
PRKCA-203ENST00000578063 POLRMTO00411 1230 aaKnown RBP22.63■■□□□ 1.21
PRKCA-203ENST00000578063 ATP5JP18859 108 aa22.63■■□□□ 1.21
PRKCA-203ENST00000578063 DDR1Q08345 913 aa22.63■■□□□ 1.21
PRKCA-203ENST00000578063 ANKRD18AQ8IVF6 992 aa22.63■■□□□ 1.21
PRKCA-203ENST00000578063 VGLL2Q8N8G2 317 aa22.63■■□□□ 1.21
PRKCA-203ENST00000578063 PDE8BO95263 885 aa22.62■■□□□ 1.21
PRKCA-203ENST00000578063 TNRC6CQ9HCJ0 1690 aaKnown RBP22.62■■□□□ 1.21
PRKCA-203ENST00000578063 QSER1Q2KHR3 1735 aa22.62■■□□□ 1.21
PRKCA-203ENST00000578063 CASZ1Q86V15 1759 aa22.62■■□□□ 1.21
PRKCA-203ENST00000578063 TIMM10P62072 90 aa22.62■■□□□ 1.21
PRKCA-203ENST00000578063 ATP2B3Q16720 1220 aa22.62■■□□□ 1.21
PRKCA-203ENST00000578063 MFAP1P55081 439 aaKnown RBP22.61■■□□□ 1.21
PRKCA-203ENST00000578063 CCDC24Q8N4L8 307 aa22.61■■□□□ 1.21
PRKCA-203ENST00000578063 EVI5LQ96CN4 794 aa22.6■■□□□ 1.21
PRKCA-203ENST00000578063 BSDC1Q9NW68 430 aaPredicted RBP22.6■■□□□ 1.21
PRKCA-203ENST00000578063 PUM3Q15397 648 aaKnown RBP22.6■■□□□ 1.21
PRKCA-203ENST00000578063 DDX46Q7L014 1031 aaKnown RBP22.6■■□□□ 1.21
PRKCA-203ENST00000578063 MAP4K4O95819 1239 aaPredicted RBP22.59■■□□□ 1.21
PRKCA-203ENST00000578063 ANP32AP39687 249 aaKnown RBP22.59■■□□□ 1.21
PRKCA-203ENST00000578063 XAGE2Q96GT9 111 aa22.59■■□□□ 1.21
PRKCA-203ENST00000578063 BOLA2Q9H3K6 86 aa22.59■■□□□ 1.21
PRKCA-203ENST00000578063 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.58■■□□□ 1.21
PRKCA-203ENST00000578063 CHMLP26374 656 aa22.57■■□□□ 1.2
PRKCA-203ENST00000578063 CCDC158Q5M9N0 1113 aa22.57■■□□□ 1.2
PRKCA-203ENST00000578063 GORABQ5T7V8 394 aa22.57■■□□□ 1.2
PRKCA-203ENST00000578063 LPIN2Q92539 896 aa22.57■■□□□ 1.2
PRKCA-203ENST00000578063 CELF1Q92879 486 aaKnown RBP22.57■■□□□ 1.2
PRKCA-203ENST00000578063 NRXN2Q9P2S2 1712 aa22.57■■□□□ 1.2
PRKCA-203ENST00000578063 COL4A1P02462 1669 aa22.57■■□□□ 1.2
PRKCA-203ENST00000578063 SPEF2Q9C093 1822 aa22.57■■□□□ 1.2
PRKCA-203ENST00000578063 RPS8P62241 208 aaKnown RBP22.57■■□□□ 1.2
PRKCA-203ENST00000578063 CHRNDQ07001 517 aa22.57■■□□□ 1.2
PRKCA-203ENST00000578063 CRY2Q49AN0 593 aa22.57■■□□□ 1.2
PRKCA-203ENST00000578063 HAUS7Q99871 368 aa22.57■■□□□ 1.2
PRKCA-203ENST00000578063 FGFR2P21802 821 aa22.56■■□□□ 1.2
PRKCA-203ENST00000578063 TBC1D32Q96NH3 1257 aa22.56■■□□□ 1.2
PRKCA-203ENST00000578063 PARP3Q9Y6F1 533 aa22.56■■□□□ 1.2
PRKCA-203ENST00000578063 MMP10P09238 476 aa22.55■■□□□ 1.2
PRKCA-203ENST00000578063 SLC5A1P13866 664 aa22.55■■□□□ 1.2
PRKCA-203ENST00000578063 ADORA1P30542 326 aa22.55■■□□□ 1.2
PRKCA-203ENST00000578063 AK9Q5TCS8 1911 aa22.55■■□□□ 1.2
PRKCA-203ENST00000578063 ARAP2Q8WZ64 1704 aa22.55■■□□□ 1.2
PRKCA-203ENST00000578063 TTC39AQ5SRH9 613 aa22.54■■□□□ 1.2
PRKCA-203ENST00000578063 HELBQ8NG08 1087 aaPredicted RBP22.54■■□□□ 1.2
PRKCA-203ENST00000578063 RPGRQ92834 1020 aaKnown RBP22.54■■□□□ 1.2
PRKCA-203ENST00000578063 HIP1O00291 1037 aa22.54■■□□□ 1.2
PRKCA-203ENST00000578063 REC8O95072 547 aa22.54■■□□□ 1.2
PRKCA-203ENST00000578063 GRAPQ13588 217 aa22.54■■□□□ 1.2
PRKCA-203ENST00000578063 GRAPLQ8TC17 118 aaPredicted RBP22.54■■□□□ 1.2
PRKCA-203ENST00000578063 C22orf23Q9BZE7 217 aa22.54■■□□□ 1.2
PRKCA-203ENST00000578063 RFX7Q2KHR2 1363 aa22.54■■□□□ 1.2
PRKCA-203ENST00000578063 KLRG2A4D1S0 409 aaPredicted RBP22.53■■□□□ 1.2
PRKCA-203ENST00000578063 IFIT1P09914 478 aaKnown RBP22.53■■□□□ 1.2
PRKCA-203ENST00000578063 ZNF512BQ96KM6 892 aaPredicted RBP22.53■■□□□ 1.2
PRKCA-203ENST00000578063 ESYT1Q9BSJ8 1104 aa22.53■■□□□ 1.2
PRKCA-203ENST00000578063 MINPP1Q9UNW1 487 aa22.53■■□□□ 1.2
PRKCA-203ENST00000578063 TAF5LO75529 589 aa22.52■■□□□ 1.2
PRKCA-203ENST00000578063 DNAJC2Q99543 621 aaKnown RBP22.52■■□□□ 1.2
PRKCA-203ENST00000578063 BRIP1Q9BX63 1249 aa22.52■■□□□ 1.2
PRKCA-203ENST00000578063 DIAPH3Q9NSV4 1193 aa22.52■■□□□ 1.2
PRKCA-203ENST00000578063 MSL1Q68DK7 614 aa22.51■■□□□ 1.19
PRKCA-203ENST00000578063 TICAM2Q86XR7 235 aa22.51■■□□□ 1.19
PRKCA-203ENST00000578063 RBM17Q96I25 401 aaKnown RBP22.51■■□□□ 1.19
PRKCA-203ENST00000578063 FSD1Q9BTV5 496 aa22.51■■□□□ 1.19
PRKCA-203ENST00000578063 ANKRD2Q9GZV1 360 aa22.51■■□□□ 1.19
PRKCA-203ENST00000578063 A0A1B0GUL6 1792 aa22.5■■□□□ 1.19
PRKCA-203ENST00000578063 HOXA10P31260 410 aaPredicted RBP22.5■■□□□ 1.19
PRKCA-203ENST00000578063 UBE4AQ14139 1066 aa22.5■■□□□ 1.19
PRKCA-203ENST00000578063 RUFY2Q8WXA3 655 aa22.5■■□□□ 1.19
PRKCA-203ENST00000578063 PAG1Q9NWQ8 432 aa22.5■■□□□ 1.19
PRKCA-203ENST00000578063 UQCRFS1P1P0C7P4 283 aa22.49■■□□□ 1.19
PRKCA-203ENST00000578063 RBM25P49756 843 aaKnown RBP22.49■■□□□ 1.19
PRKCA-203ENST00000578063 TAF1P21675 1872 aa22.49■■□□□ 1.19
PRKCA-203ENST00000578063 CCDC102BQ68D86 513 aa22.48■■□□□ 1.19
PRKCA-203ENST00000578063 ARID4AP29374 1257 aaPredicted RBP22.48■■□□□ 1.19
PRKCA-203ENST00000578063 PDE6BP35913 854 aa22.48■■□□□ 1.19
PRKCA-203ENST00000578063 KBTBD3Q8NAB2 608 aa22.48■■□□□ 1.19
PRKCA-203ENST00000578063 CRAMP1Q96RY5 1269 aa22.48■■□□□ 1.19
PRKCA-203ENST00000578063 GOLIM4O00461 696 aa22.47■■□□□ 1.19
PRKCA-203ENST00000578063 SGSM2O43147 1006 aa22.47■■□□□ 1.19
PRKCA-203ENST00000578063 EDC3Q96F86 508 aaKnown RBP22.47■■□□□ 1.19
PRKCA-203ENST00000578063 RAD50Q92878 1312 aa22.47■■□□□ 1.19
PRKCA-203ENST00000578063 EPB41L2O43491 1005 aaKnown RBP22.46■■□□□ 1.19
PRKCA-203ENST00000578063 SLC16A10Q8TF71 515 aa22.46■■□□□ 1.19
PRKCA-203ENST00000578063 NDUFB9Q9Y6M9 179 aa22.46■■□□□ 1.19
PRKCA-203ENST00000578063 ANKRD31Q8N7Z5 1873 aa22.46■■□□□ 1.19
PRKCA-203ENST00000578063 BBOX1O75936 387 aa22.45■■□□□ 1.19
PRKCA-203ENST00000578063 PHKA1P46020 1223 aa22.45■■□□□ 1.19
PRKCA-203ENST00000578063 CWC27Q6UX04 472 aaKnown RBP22.45■■□□□ 1.19
PRKCA-203ENST00000578063 TMC4Q7Z404 712 aa22.45■■□□□ 1.19
PRKCA-203ENST00000578063 USP26Q9BXU7 913 aa22.45■■□□□ 1.19
PRKCA-203ENST00000578063 SNAP23O00161 211 aa22.45■■□□□ 1.18
PRKCA-203ENST00000578063 KCNJ4P48050 445 aa22.45■■□□□ 1.18
PRKCA-203ENST00000578063 DDRGK1Q96HY6 314 aa22.45■■□□□ 1.18
PRKCA-203ENST00000578063 MCAMP43121 646 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms