RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 CCDC191Q8NCU4 936 aa5.44□□□□□ -1.54
NF1-218ENST00000577967 SLC26A6Q9BXS9 759 aa5.44□□□□□ -1.54
NF1-218ENST00000577967 CRNKL1Q9BZJ0 848 aaKnown RBP5.44□□□□□ -1.54
NF1-218ENST00000577967 ZHX3Q9H4I2 956 aa5.44□□□□□ -1.54
NF1-218ENST00000577967 RNF41Q9H4P4 317 aaPredicted RBP5.44□□□□□ -1.54
NF1-218ENST00000577967 VAT1LQ9HCJ6 419 aa5.44□□□□□ -1.54
NF1-218ENST00000577967 TFIP11Q9UBB9 837 aaKnown RBP5.44□□□□□ -1.54
NF1-218ENST00000577967 PDE8AO60658 829 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 EPS15P42566 896 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 BEND3Q5T5X7 828 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 TPTE2Q6XPS3 522 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 SLF2Q8IX21 1173 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 BRF1Q92994 677 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 FAM227BQ96M60 508 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 DBNDD2Q9BQY9 259 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 TMOD2Q9NZR1 351 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 CNPY2Q9Y2B0 182 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 NRXN1Q9ULB1 1477 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 ARHGEF28Q8N1W1 1705 aaKnown RBP5.43□□□□□ -1.54
NF1-218ENST00000577967 KLF18A0A0U1RQI7 1052 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 ZNF76P36508 570 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 APOBRQ0VD83 1088 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 TTLL5Q6EMB2 1281 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 NAA16Q6N069 864 aaPredicted RBP5.43□□□□□ -1.54
NF1-218ENST00000577967 RUFY3Q7L099 469 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 AXIN2Q9Y2T1 843 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 PTPRUQ92729 1446 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 CEP170BQ9Y4F5 1589 aaPredicted RBP5.43□□□□□ -1.54
NF1-218ENST00000577967 TSPY2A6NKD2 308 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 NLRP5P59047 1200 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 FAM182BQ5T319 152 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 IQCA1Q86XH1 822 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 KAT14Q9H8E8 782 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 ZNF287Q9HBT7 754 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 MAGEC2Q9UBF1 373 aaPredicted RBP5.43□□□□□ -1.54
NF1-218ENST00000577967 ASAP1Q9ULH1 1129 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 CCDC171Q6TFL3 1326 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 VWDEQ8N2E2 1590 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 EYA2O00167 538 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 SERPINC1P01008 464 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 HMGB2P26583 209 aaKnown RBP5.43□□□□□ -1.54
NF1-218ENST00000577967 MCM5P33992 734 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 CEP57L1Q8IYX8 460 aa5.43□□□□□ -1.54
NF1-218ENST00000577967 BAG4O95429 457 aaKnown RBP5.42□□□□□ -1.54
NF1-218ENST00000577967 BAG3O95817 575 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 ZNF853P0CG23 659 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 GSPT1P15170 499 aaKnown RBP5.42□□□□□ -1.54
NF1-218ENST00000577967 ZGPATQ8N5A5 531 aaKnown RBP5.42□□□□□ -1.54
NF1-218ENST00000577967 CTCFLQ8NI51 663 aaPredicted RBP5.42□□□□□ -1.54
NF1-218ENST00000577967 SAP30BPQ9UHR5 308 aaKnown RBP5.42□□□□□ -1.54
NF1-218ENST00000577967 NAP1L1P55209 391 aaKnown RBP5.42□□□□□ -1.54
NF1-218ENST00000577967 PDE4BQ07343 736 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 ZKSCAN3Q9BRR0 538 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 USP44Q9H0E7 712 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 ARMT1Q9H993 441 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 CEP131Q9UPN4 1083 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 MROH1Q8NDA8 1641 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 SETD1BQ9UPS6 1966 aaKnown RBP5.42□□□□□ -1.54
NF1-218ENST00000577967 SLC27A2O14975 620 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 PRC1O43663 620 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 ZFYP08048 801 aaPredicted RBP5.42□□□□□ -1.54
NF1-218ENST00000577967 TSPY3P0CV98 308 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 TSPY8P0CW00 308 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 RXRAP19793 462 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 KCNQ4P56696 695 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 CCAR1Q8IX12 1150 aaKnown RBP5.42□□□□□ -1.54
NF1-218ENST00000577967 HELLSQ9NRZ9 838 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 MYO5BQ9ULV0 1848 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 SPATA31D1Q6ZQQ2 1576 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 DTNBO60941 627 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 ZSCAN22P10073 491 aaPredicted RBP5.42□□□□□ -1.54
NF1-218ENST00000577967 WTAPQ15007 396 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 MAP3K11Q16584 847 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 CCDC183Q5T5S1 534 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 SNX21Q969T3 373 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 CARD10Q9BWT7 1032 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 KRT23Q9C075 422 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 NRKQ7Z2Y5 1582 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 TNS3Q68CZ2 1445 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 SSBP05455 408 aaKnown RBP eCLIP5.42□□□□□ -1.54
NF1-218ENST00000577967 CTSWP56202 376 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 PUM3Q15397 648 aaKnown RBP5.42□□□□□ -1.54
NF1-218ENST00000577967 IFIT1BQ5T764 474 aaKnown RBP5.42□□□□□ -1.54
NF1-218ENST00000577967 CNBD1Q8NA66 436 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 ANKRD2Q9GZV1 360 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 SPATA31A3Q5VYP0 1347 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 WDR17Q8IZU2 1322 aa5.42□□□□□ -1.54
NF1-218ENST00000577967 MBD4O95243 580 aa5.41□□□□□ -1.54
NF1-218ENST00000577967 IARSP41252 1262 aaKnown RBP5.41□□□□□ -1.54
NF1-218ENST00000577967 CKAP2LQ8IYA6 745 aa5.41□□□□□ -1.54
NF1-218ENST00000577967 NSFL1CQ9UNZ2 370 aaKnown RBP5.41□□□□□ -1.54
NF1-218ENST00000577967 SNX14Q9Y5W7 946 aa5.41□□□□□ -1.54
NF1-218ENST00000577967 ERBB3P21860 1342 aa5.41□□□□□ -1.54
NF1-218ENST00000577967 CPSF1Q10570 1443 aaKnown RBP5.41□□□□□ -1.54
NF1-218ENST00000577967 MED14O60244 1454 aa5.41□□□□□ -1.54
NF1-218ENST00000577967 USP48Q86UV5 1035 aa5.41□□□□□ -1.54
NF1-218ENST00000577967 IL27Q8NEV9 243 aa5.41□□□□□ -1.54
NF1-218ENST00000577967 DNAJC5Q9H3Z4 198 aa5.41□□□□□ -1.54
NF1-218ENST00000577967 ORC3Q9UBD5 711 aaPredicted RBP5.41□□□□□ -1.54
NF1-218ENST00000577967 R3HCC1Q9Y3T6 440 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms