RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 TRMT112Q9UI30 125 aaKnown RBP19.1■□□□□ 0.65
USP43-204ENST00000573955 R3HCC1Q9Y3T6 440 aaKnown RBP19.1■□□□□ 0.65
USP43-204ENST00000573955 AFF2P51816 1311 aa19.1■□□□□ 0.65
USP43-204ENST00000573955 A0A1B0GUL7 405 aa19.09■□□□□ 0.65
USP43-204ENST00000573955 VPS72Q15906 364 aa19.09■□□□□ 0.65
USP43-204ENST00000573955 CCDC129Q6ZRS4 1044 aa19.09■□□□□ 0.65
USP43-204ENST00000573955 SEC62Q99442 399 aaKnown RBP19.09■□□□□ 0.65
USP43-204ENST00000573955 GOLIM4O00461 696 aa19.09■□□□□ 0.65
USP43-204ENST00000573955 DTNBO60941 627 aa19.09■□□□□ 0.65
USP43-204ENST00000573955 UQCRHLA0A096LP55 91 aa19.08■□□□□ 0.65
USP43-204ENST00000573955 LOC102724428A0A0B4J2F2 783 aa19.08■□□□□ 0.65
USP43-204ENST00000573955 UQCRHP07919 91 aa19.08■□□□□ 0.65
USP43-204ENST00000573955 CRKLP46109 303 aaKnown RBP19.08■□□□□ 0.65
USP43-204ENST00000573955 SIK1P57059 783 aa19.08■□□□□ 0.65
USP43-204ENST00000573955 IFIT5Q13325 482 aaKnown RBP19.08■□□□□ 0.65
USP43-204ENST00000573955 TAF3Q5VWG9 929 aa19.08■□□□□ 0.65
USP43-204ENST00000573955 ZSCAN30Q86W11 494 aa19.08■□□□□ 0.65
USP43-204ENST00000573955 CHAMP1Q96JM3 812 aa19.08■□□□□ 0.65
USP43-204ENST00000573955 CWC22Q9HCG8 908 aaKnown RBP19.08■□□□□ 0.65
USP43-204ENST00000573955 CEP126Q9P2H0 1117 aa19.08■□□□□ 0.65
USP43-204ENST00000573955 TULP1O00294 542 aaPredicted RBP19.08■□□□□ 0.64
USP43-204ENST00000573955 AK2P54819 239 aa19.08■□□□□ 0.64
USP43-204ENST00000573955 ITPK1Q13572 414 aa19.08■□□□□ 0.64
USP43-204ENST00000573955 BARGINQ6ZT62 677 aa19.08■□□□□ 0.64
USP43-204ENST00000573955 FNBP4Q8N3X1 1017 aaPredicted RBP19.08■□□□□ 0.64
USP43-204ENST00000573955 HAUS7Q99871 368 aa19.08■□□□□ 0.64
USP43-204ENST00000573955 GREM2Q9H772 168 aa19.08■□□□□ 0.64
USP43-204ENST00000573955 MSNP26038 577 aaKnown RBP19.07■□□□□ 0.64
USP43-204ENST00000573955 IL6STP40189 918 aaPredicted RBP19.07■□□□□ 0.64
USP43-204ENST00000573955 NUCB2P80303 420 aa19.07■□□□□ 0.64
USP43-204ENST00000573955 SAMD1Q6SPF0 538 aaPredicted RBP19.07■□□□□ 0.64
USP43-204ENST00000573955 IL17RAQ96F46 866 aa19.07■□□□□ 0.64
USP43-204ENST00000573955 UBN2Q6ZU65 1347 aa19.07■□□□□ 0.64
USP43-204ENST00000573955 DYNC1I1O14576 645 aa19.07■□□□□ 0.64
USP43-204ENST00000573955 IRS4O14654 1257 aaPredicted RBP19.07■□□□□ 0.64
USP43-204ENST00000573955 COL9A3Q14050 684 aaPredicted RBP19.07■□□□□ 0.64
USP43-204ENST00000573955 CREB3L3Q68CJ9 461 aa19.07■□□□□ 0.64
USP43-204ENST00000573955 TAF6LQ9Y6J9 622 aa19.07■□□□□ 0.64
USP43-204ENST00000573955 BAG4O95429 457 aaKnown RBP19.06■□□□□ 0.64
USP43-204ENST00000573955 ADORA1P30542 326 aa19.06■□□□□ 0.64
USP43-204ENST00000573955 NECTIN1Q15223 517 aa19.06■□□□□ 0.64
USP43-204ENST00000573955 HSP90AB3PQ58FF7 597 aa19.06■□□□□ 0.64
USP43-204ENST00000573955 INTS5Q6P9B9 1019 aaKnown RBP19.06■□□□□ 0.64
USP43-204ENST00000573955 CCDC87Q9NVE4 849 aa19.06■□□□□ 0.64
USP43-204ENST00000573955 GOLGB1Q14789 3259 aaKnown RBP19.06■□□□□ 0.64
USP43-204ENST00000573955 ITGA6P23229 1130 aa19.06■□□□□ 0.64
USP43-204ENST00000573955 MAP4K1Q92918 833 aa19.06■□□□□ 0.64
USP43-204ENST00000573955 SECISBP2LQ93073 1101 aaKnown RBP19.06■□□□□ 0.64
USP43-204ENST00000573955 SNRKQ9NRH2 765 aa19.06■□□□□ 0.64
USP43-204ENST00000573955 ZNF609O15014 1411 aa19.06■□□□□ 0.64
USP43-204ENST00000573955 CIAO1O76071 339 aa19.05■□□□□ 0.64
USP43-204ENST00000573955 GORABQ5T7V8 394 aa19.05■□□□□ 0.64
USP43-204ENST00000573955 MCTP1Q6DN14 999 aa19.05■□□□□ 0.64
USP43-204ENST00000573955 TTLL11Q8NHH1 800 aa19.05■□□□□ 0.64
USP43-204ENST00000573955 TTC14Q96N46 770 aa19.05■□□□□ 0.64
USP43-204ENST00000573955 ZDHHC9Q9Y397 364 aa19.05■□□□□ 0.64
USP43-204ENST00000573955 NWD2Q9ULI1 1742 aa19.05■□□□□ 0.64
USP43-204ENST00000573955 CHRM1P11229 460 aaPredicted RBP19.05■□□□□ 0.64
USP43-204ENST00000573955 ZKSCAN1P17029 563 aaPredicted RBP19.05■□□□□ 0.64
USP43-204ENST00000573955 CUL4AQ13619 759 aa19.05■□□□□ 0.64
USP43-204ENST00000573955 TCEANC2Q96MN5 208 aa19.05■□□□□ 0.64
USP43-204ENST00000573955 PAG1Q9NWQ8 432 aa19.05■□□□□ 0.64
USP43-204ENST00000573955 PALLDQ8WX93 1383 aa19.05■□□□□ 0.64
USP43-204ENST00000573955 MED23Q9ULK4 1368 aa19.05■□□□□ 0.64
USP43-204ENST00000573955 CYP2E1P05181 493 aaPredicted RBP19.04■□□□□ 0.64
USP43-204ENST00000573955 CSF1RP07333 972 aa19.04■□□□□ 0.64
USP43-204ENST00000573955 IFIT1P09914 478 aaKnown RBP19.04■□□□□ 0.64
USP43-204ENST00000573955 CTSWP56202 376 aa19.04■□□□□ 0.64
USP43-204ENST00000573955 RUFY3Q7L099 469 aa19.04■□□□□ 0.64
USP43-204ENST00000573955 SLC27A2O14975 620 aa19.04■□□□□ 0.64
USP43-204ENST00000573955 EIF5P55010 431 aaKnown RBP19.04■□□□□ 0.64
USP43-204ENST00000573955 FKBP4Q02790 459 aaKnown RBP eCLIP19.04■□□□□ 0.64
USP43-204ENST00000573955 LDHAL6AQ6ZMR3 332 aa19.04■□□□□ 0.64
USP43-204ENST00000573955 DNTTIP2Q5QJE6 756 aaKnown RBP19.04■□□□□ 0.64
USP43-204ENST00000573955 PLA2G12BQ9BX93 195 aa19.04■□□□□ 0.64
USP43-204ENST00000573955 PDRG1Q9NUG6 133 aa19.04■□□□□ 0.64
USP43-204ENST00000573955 SPATA31A6Q5VVP1 1343 aa19.03■□□□□ 0.64
USP43-204ENST00000573955 LARGE1O95461 756 aa19.03■□□□□ 0.64
USP43-204ENST00000573955 HCLS1P14317 486 aaPredicted RBP19.03■□□□□ 0.64
USP43-204ENST00000573955 GPR108Q9NPR9 543 aa19.03■□□□□ 0.64
USP43-204ENST00000573955 NUP98P52948 1817 aa19.03■□□□□ 0.64
USP43-204ENST00000573955 TAF5LO75529 589 aa19.03■□□□□ 0.64
USP43-204ENST00000573955 FOXD4L6Q3SYB3 417 aaPredicted RBP19.03■□□□□ 0.64
USP43-204ENST00000573955 METTL24Q5JXM2 366 aa19.03■□□□□ 0.64
USP43-204ENST00000573955 FOXD4L3Q6VB84 417 aaPredicted RBP19.03■□□□□ 0.64
USP43-204ENST00000573955 KBTBD3Q8NAB2 608 aa19.03■□□□□ 0.64
USP43-204ENST00000573955 XAGE2Q96GT9 111 aa19.03■□□□□ 0.64
USP43-204ENST00000573955 CNNM1Q9NRU3 951 aa19.03■□□□□ 0.64
USP43-204ENST00000573955 CYP46A1Q9Y6A2 500 aa19.03■□□□□ 0.64
USP43-204ENST00000573955 CDHR2Q9BYE9 1310 aa19.02■□□□□ 0.64
USP43-204ENST00000573955 GJD4Q96KN9 370 aaPredicted RBP19.02■□□□□ 0.64
USP43-204ENST00000573955 ERVV-1B6SEH8 477 aa19.02■□□□□ 0.63
USP43-204ENST00000573955 TTC39AQ5SRH9 613 aa19.02■□□□□ 0.63
USP43-204ENST00000573955 SUSD4Q5VX71 490 aa19.02■□□□□ 0.63
USP43-204ENST00000573955 ANKRD18BA2A2Z9 1011 aa19.01■□□□□ 0.63
USP43-204ENST00000573955 GOLGA6L22H0YM25 854 aa19.01■□□□□ 0.63
USP43-204ENST00000573955 LIMCH1Q9UPQ0 1083 aa19.01■□□□□ 0.63
USP43-204ENST00000573955 PI16Q6UXB8 463 aa19.01■□□□□ 0.63
USP43-204ENST00000573955 ZNF34Q8IZ26 560 aa19.01■□□□□ 0.63
USP43-204ENST00000573955 ZSWIM6Q9HCJ5 1215 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms