RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 LPIN2Q92539 896 aa12□□□□□ -0.49
SMG6-213ENST00000573166 GSE1Q14687 1217 aa12□□□□□ -0.49
SMG6-213ENST00000573166 SAFBQ15424 915 aaKnown RBP eCLIP12□□□□□ -0.49
SMG6-213ENST00000573166 SUSD4Q5VX71 490 aa12□□□□□ -0.49
SMG6-213ENST00000573166 MPNDQ8N594 471 aa12□□□□□ -0.49
SMG6-213ENST00000573166 OTUD7AQ8TE49 926 aaPredicted RBP12□□□□□ -0.49
SMG6-213ENST00000573166 HDAC9Q9UKV0 1011 aa12□□□□□ -0.49
SMG6-213ENST00000573166 IQSEC2Q5JU85 1478 aa12□□□□□ -0.49
SMG6-213ENST00000573166 CCDC69A6NI79 296 aa12□□□□□ -0.49
SMG6-213ENST00000573166 MPHOSPH10O00566 681 aaKnown RBP12□□□□□ -0.49
SMG6-213ENST00000573166 LARGE2Q8N3Y3 721 aa12□□□□□ -0.49
SMG6-213ENST00000573166 MROH5Q6ZUA9 1318 aa12□□□□□ -0.49
SMG6-213ENST00000573166 NRXN3Q9Y4C0 1643 aa11.99□□□□□ -0.49
SMG6-213ENST00000573166 MYO1BO43795 1136 aa11.99□□□□□ -0.49
SMG6-213ENST00000573166 RANBP6O60518 1105 aaKnown RBP11.99□□□□□ -0.49
SMG6-213ENST00000573166 CASTP20810 708 aaKnown RBP11.99□□□□□ -0.49
SMG6-213ENST00000573166 ANKRD1Q15327 319 aa11.99□□□□□ -0.49
SMG6-213ENST00000573166 SLC4A8Q2Y0W8 1093 aa11.99□□□□□ -0.49
SMG6-213ENST00000573166 CNKSR1Q969H4 720 aa11.99□□□□□ -0.49
SMG6-213ENST00000573166 CSPP1Q1MSJ5 1256 aa11.99□□□□□ -0.49
SMG6-213ENST00000573166 CRNKL1Q9BZJ0 848 aaKnown RBP11.99□□□□□ -0.49
SMG6-213ENST00000573166 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.99□□□□□ -0.49
SMG6-213ENST00000573166 ADGRB2O60241 1585 aa11.99□□□□□ -0.49
SMG6-213ENST00000573166 LDHBP07195 334 aaKnown RBP11.99□□□□□ -0.49
SMG6-213ENST00000573166 HAND2P61296 217 aa11.99□□□□□ -0.49
SMG6-213ENST00000573166 PDRG1Q9NUG6 133 aa11.99□□□□□ -0.49
SMG6-213ENST00000573166 CEMIPQ8WUJ3 1361 aa11.99□□□□□ -0.49
SMG6-213ENST00000573166 IGKV5-2P06315 115 aa11.98□□□□□ -0.49
SMG6-213ENST00000573166 LRRC24Q50LG9 513 aa11.98□□□□□ -0.49
SMG6-213ENST00000573166 ZNF444Q8N0Y2 327 aaPredicted RBP11.98□□□□□ -0.49
SMG6-213ENST00000573166 DENND2AQ9ULE3 1009 aa11.98□□□□□ -0.49
SMG6-213ENST00000573166 XBP1P17861 261 aa11.98□□□□□ -0.49
SMG6-213ENST00000573166 RBM26Q5T8P6 1007 aaKnown RBP11.98□□□□□ -0.49
SMG6-213ENST00000573166 SEC31BQ9NQW1 1179 aa11.98□□□□□ -0.49
SMG6-213ENST00000573166 ZBTB7AO95365 584 aa11.98□□□□□ -0.49
SMG6-213ENST00000573166 CCDC34Q96HJ3 373 aa11.98□□□□□ -0.49
SMG6-213ENST00000573166 KIF20BQ96Q89 1820 aa11.98□□□□□ -0.49
SMG6-213ENST00000573166 ITPK1Q13572 414 aa11.97□□□□□ -0.49
SMG6-213ENST00000573166 TTLL12Q14166 644 aaPredicted RBP11.97□□□□□ -0.49
SMG6-213ENST00000573166 MAGEB6Q8N7X4 407 aa11.97□□□□□ -0.49
SMG6-213ENST00000573166 MIGA1Q8NAN2 632 aa11.97□□□□□ -0.49
SMG6-213ENST00000573166 RNF41Q9H4P4 317 aaPredicted RBP11.97□□□□□ -0.49
SMG6-213ENST00000573166 MCMDC2Q4G0Z9 681 aa11.97□□□□□ -0.49
SMG6-213ENST00000573166 PUS3Q9BZE2 481 aaKnown RBP11.97□□□□□ -0.49
SMG6-213ENST00000573166 SSFA2P28290 1259 aa11.97□□□□□ -0.49
SMG6-213ENST00000573166 DEFB132Q7Z7B7 95 aa11.97□□□□□ -0.49
SMG6-213ENST00000573166 COPRSQ9NQ92 184 aa11.97□□□□□ -0.49
SMG6-213ENST00000573166 GJA3Q9Y6H8 435 aa11.97□□□□□ -0.49
SMG6-213ENST00000573166 EIF5P55010 431 aaKnown RBP11.96□□□□□ -0.49
SMG6-213ENST00000573166 TBC1D9BQ66K14 1250 aa11.96□□□□□ -0.49
SMG6-213ENST00000573166 IQCA1Q86XH1 822 aa11.96□□□□□ -0.49
SMG6-213ENST00000573166 SLC4A4Q9Y6R1 1079 aa11.96□□□□□ -0.49
SMG6-213ENST00000573166 PPIP5K2O43314 1243 aa11.96□□□□□ -0.49
SMG6-213ENST00000573166 HLA-DOAP06340 250 aa11.96□□□□□ -0.49
SMG6-213ENST00000573166 CCAR1Q8IX12 1150 aaKnown RBP11.96□□□□□ -0.49
SMG6-213ENST00000573166 SYNE4Q8N205 404 aa11.96□□□□□ -0.49
SMG6-213ENST00000573166 LINC00116Q8NCU8 138 aa11.96□□□□□ -0.49
SMG6-213ENST00000573166 SUPT20HQ8NEM7 779 aa11.96□□□□□ -0.49
SMG6-213ENST00000573166 CHRNDQ07001 517 aa11.96□□□□□ -0.5
SMG6-213ENST00000573166 GPR162Q16538 588 aa11.96□□□□□ -0.5
SMG6-213ENST00000573166 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.5
SMG6-213ENST00000573166 TRIM22Q8IYM9 498 aa11.96□□□□□ -0.5
SMG6-213ENST00000573166 NDUFB9Q9Y6M9 179 aa11.96□□□□□ -0.5
SMG6-213ENST00000573166 KNDC1Q76NI1 1749 aa11.96□□□□□ -0.5
SMG6-213ENST00000573166 FMN2Q9NZ56 1722 aa11.96□□□□□ -0.5
SMG6-213ENST00000573166 CHD2O14647 1828 aaKnown RBP11.95□□□□□ -0.5
SMG6-213ENST00000573166 H7C1W4 665 aa11.95□□□□□ -0.5
SMG6-213ENST00000573166 RNF113AO15541 343 aaKnown RBP11.95□□□□□ -0.5
SMG6-213ENST00000573166 EAF2Q96CJ1 260 aaPredicted RBP11.95□□□□□ -0.5
SMG6-213ENST00000573166 CHMP5Q9NZZ3 219 aa11.95□□□□□ -0.5
SMG6-213ENST00000573166 NMIQ13287 307 aaPredicted RBP11.95□□□□□ -0.5
SMG6-213ENST00000573166 PICALMQ13492 652 aa11.95□□□□□ -0.5
SMG6-213ENST00000573166 BRMS1Q9HCU9 246 aa11.95□□□□□ -0.5
SMG6-213ENST00000573166 MAGEB6P1A0A0J9YX57 407 aa11.95□□□□□ -0.5
SMG6-213ENST00000573166 VEZTQ9HBM0 779 aa11.95□□□□□ -0.5
SMG6-213ENST00000573166 XRN1Q8IZH2 1706 aaKnown RBP11.95□□□□□ -0.5
SMG6-213ENST00000573166 PSDA5PKW4 1024 aaPredicted RBP11.94□□□□□ -0.5
SMG6-213ENST00000573166 PTMSP20962 102 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 GYG1P46976 350 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 NUCB2P80303 420 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 TTLL11Q8NHH1 800 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 WDR66Q8TBY9 1149 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 ESYT1Q9BSJ8 1104 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 FBXO3Q9UK99 471 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 PDE8BO95263 885 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 ATP2B1P20020 1258 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 PDCP20941 246 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 PDE4BQ07343 736 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 TCEAL9Q9UHQ7 104 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 ZNF142P52746 1687 aaPredicted RBP11.94□□□□□ -0.5
SMG6-213ENST00000573166 BBOX1O75936 387 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 NFIXQ14938 502 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 CLEC11AQ9Y240 323 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 ATP2B4P23634 1241 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 MFSD6Q6ZSS7 791 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 NIM1KQ8IY84 436 aa11.94□□□□□ -0.5
SMG6-213ENST00000573166 PXDNQ92626 1479 aa11.93□□□□□ -0.5
SMG6-213ENST00000573166 TSPY2A6NKD2 308 aa11.93□□□□□ -0.5
SMG6-213ENST00000573166 IFIT3O14879 490 aaKnown RBP11.93□□□□□ -0.5
SMG6-213ENST00000573166 EZH2Q15910 746 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 258.1 ms