RNA–Protein interactions for RNA: ENST00000573035.5

GTF2I-212, Transcript of general transcription factor IIi, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene GTF2I, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-212ENST00000573035 PER1O15534 1290 aaPredicted RBP16.7■□□□□ 0.26
GTF2I-212ENST00000573035 KLHL10Q6JEL2 608 aa16.7■□□□□ 0.26
GTF2I-212ENST00000573035 MPHOSPH10O00566 681 aaKnown RBP16.7■□□□□ 0.26
GTF2I-212ENST00000573035 NEFHP12036 1026 aa16.7■□□□□ 0.26
GTF2I-212ENST00000573035 EVCP57679 992 aa16.7■□□□□ 0.26
GTF2I-212ENST00000573035 CCDC102BQ68D86 513 aa16.7■□□□□ 0.26
GTF2I-212ENST00000573035 TCOF1Q13428 1488 aaKnown RBP16.7■□□□□ 0.26
GTF2I-212ENST00000573035 HSF2BPO75031 334 aa16.69■□□□□ 0.26
GTF2I-212ENST00000573035 C17orf53Q8N3J3 647 aaPredicted RBP16.69■□□□□ 0.26
GTF2I-212ENST00000573035 MRPS27Q92552 414 aaKnown RBP16.69■□□□□ 0.26
GTF2I-212ENST00000573035 SETDB2Q96T68 719 aa16.69■□□□□ 0.26
GTF2I-212ENST00000573035 ANTXR1Q9H6X2 564 aa16.69■□□□□ 0.26
GTF2I-212ENST00000573035 ZMYM4Q5VZL5 1548 aa16.69■□□□□ 0.26
GTF2I-212ENST00000573035 ELF2Q15723 593 aa16.69■□□□□ 0.26
GTF2I-212ENST00000573035 PLEKHM2Q8IWE5 1019 aa16.69■□□□□ 0.26
GTF2I-212ENST00000573035 IP6K1Q92551 441 aa16.69■□□□□ 0.26
GTF2I-212ENST00000573035 MEIS3Q99687 375 aa16.69■□□□□ 0.26
GTF2I-212ENST00000573035 TMEM2Q9UHN6 1383 aa16.69■□□□□ 0.26
GTF2I-212ENST00000573035 SPECC1LQ69YQ0 1117 aa16.69■□□□□ 0.26
GTF2I-212ENST00000573035 CCDC82Q8N4S0 544 aa16.69■□□□□ 0.26
GTF2I-212ENST00000573035 TNNQ9UQP3 1299 aa16.69■□□□□ 0.26
GTF2I-212ENST00000573035 HMGB2P26583 209 aaKnown RBP16.69■□□□□ 0.26
GTF2I-212ENST00000573035 SEPT7Q16181 437 aaKnown RBP16.69■□□□□ 0.26
GTF2I-212ENST00000573035 DHX37Q8IY37 1157 aaKnown RBP16.69■□□□□ 0.26
GTF2I-212ENST00000573035 TSPYL6Q8N831 410 aa16.69■□□□□ 0.26
GTF2I-212ENST00000573035 CTCFLQ8NI51 663 aaPredicted RBP16.68■□□□□ 0.26
GTF2I-212ENST00000573035 KCNG4Q8TDN1 519 aa16.68■□□□□ 0.26
GTF2I-212ENST00000573035 TANGO6Q9C0B7 1094 aa16.68■□□□□ 0.26
GTF2I-212ENST00000573035 POLR3DP05423 398 aaPredicted RBP16.68■□□□□ 0.26
GTF2I-212ENST00000573035 GUCY1B3Q02153 619 aa16.68■□□□□ 0.26
GTF2I-212ENST00000573035 KANK3Q6NY19 840 aa16.68■□□□□ 0.26
GTF2I-212ENST00000573035 CRACR2BQ8N4Y2 399 aaPredicted RBP16.68■□□□□ 0.26
GTF2I-212ENST00000573035 TSC1Q92574 1164 aa16.68■□□□□ 0.26
GTF2I-212ENST00000573035 IFFO1Q0D2I5 559 aa16.68■□□□□ 0.26
GTF2I-212ENST00000573035 LIG1P18858 919 aa16.68■□□□□ 0.26
GTF2I-212ENST00000573035 SMC1AQ14683 1233 aaKnown RBP16.68■□□□□ 0.26
GTF2I-212ENST00000573035 PAXIP1Q6ZW49 1069 aaPredicted RBP16.68■□□□□ 0.26
GTF2I-212ENST00000573035 CTAGE9A4FU28 777 aa16.67■□□□□ 0.26
GTF2I-212ENST00000573035 ALS2CR12Q96Q35 445 aa16.67■□□□□ 0.26
GTF2I-212ENST00000573035 CDC5LQ99459 802 aaKnown RBP16.67■□□□□ 0.26
GTF2I-212ENST00000573035 FKBP15Q5T1M5 1219 aa16.67■□□□□ 0.26
GTF2I-212ENST00000573035 GIGYF2Q6Y7W6 1299 aaKnown RBP16.67■□□□□ 0.26
GTF2I-212ENST00000573035 MKRN1Q9UHC7 482 aaKnown RBP16.67■□□□□ 0.26
GTF2I-212ENST00000573035 ABCC1P33527 1531 aa16.67■□□□□ 0.26
GTF2I-212ENST00000573035 DNAJC21Q5F1R6 531 aaKnown RBP16.67■□□□□ 0.26
GTF2I-212ENST00000573035 LMBR1LQ6UX01 489 aa16.67■□□□□ 0.26
GTF2I-212ENST00000573035 A0A1B0GUA9 196 aa16.66■□□□□ 0.26
GTF2I-212ENST00000573035 SLC5A1P13866 664 aa16.66■□□□□ 0.26
GTF2I-212ENST00000573035 ZNF75DP51815 510 aa16.66■□□□□ 0.26
GTF2I-212ENST00000573035 SPECC1Q5M775 1068 aa16.66■□□□□ 0.26
GTF2I-212ENST00000573035 GOLIM4O00461 696 aa16.66■□□□□ 0.26
GTF2I-212ENST00000573035 TTLL12Q14166 644 aaPredicted RBP16.66■□□□□ 0.26
GTF2I-212ENST00000573035 DZIP3Q86Y13 1208 aaKnown RBP16.66■□□□□ 0.26
GTF2I-212ENST00000573035 NECAB1Q8N987 351 aa16.66■□□□□ 0.26
GTF2I-212ENST00000573035 PHAXQ9H814 394 aaKnown RBP16.66■□□□□ 0.26
GTF2I-212ENST00000573035 PZPP20742 1482 aa16.66■□□□□ 0.26
GTF2I-212ENST00000573035 ZSCAN26Q16670 478 aa16.66■□□□□ 0.26
GTF2I-212ENST00000573035 NEK1Q96PY6 1258 aa16.66■□□□□ 0.26
GTF2I-212ENST00000573035 MKNK2Q9HBH9 465 aa16.66■□□□□ 0.26
GTF2I-212ENST00000573035 A6NNZ2 444 aa16.65■□□□□ 0.26
GTF2I-212ENST00000573035 TUBB2AQ13885 445 aa16.65■□□□□ 0.26
GTF2I-212ENST00000573035 CWF19L2Q2TBE0 894 aaKnown RBP16.65■□□□□ 0.26
GTF2I-212ENST00000573035 TUBB8Q3ZCM7 444 aa16.65■□□□□ 0.26
GTF2I-212ENST00000573035 TUBB2BQ9BVA1 445 aa16.65■□□□□ 0.26
GTF2I-212ENST00000573035 NAPBQ9H115 298 aa16.65■□□□□ 0.26
GTF2I-212ENST00000573035 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.65■□□□□ 0.26
GTF2I-212ENST00000573035 PPP2R3AQ06190 1150 aa16.65■□□□□ 0.26
GTF2I-212ENST00000573035 POTEDQ86YR6 584 aa16.65■□□□□ 0.26
GTF2I-212ENST00000573035 TARBP1Q13395 1621 aaKnown RBP16.65■□□□□ 0.26
GTF2I-212ENST00000573035 MAP3K12Q12852 859 aa16.65■□□□□ 0.26
GTF2I-212ENST00000573035 HELBQ8NG08 1087 aaPredicted RBP16.65■□□□□ 0.26
GTF2I-212ENST00000573035 NLRP3Q96P20 1036 aa16.65■□□□□ 0.26
GTF2I-212ENST00000573035 CTAGE1Q96RT6 745 aa16.65■□□□□ 0.26
GTF2I-212ENST00000573035 RTCBQ9Y3I0 505 aaKnown RBP16.65■□□□□ 0.26
GTF2I-212ENST00000573035 CLGNO14967 610 aa16.64■□□□□ 0.25
GTF2I-212ENST00000573035 SYKP43405 635 aa16.64■□□□□ 0.25
GTF2I-212ENST00000573035 SYCP1Q15431 976 aa16.64■□□□□ 0.25
GTF2I-212ENST00000573035 PIK3R4Q99570 1358 aa16.64■□□□□ 0.25
GTF2I-212ENST00000573035 F8W031 263 aaPredicted RBP16.64■□□□□ 0.25
GTF2I-212ENST00000573035 GNPATO15228 680 aa16.64■□□□□ 0.25
GTF2I-212ENST00000573035 HLTFQ14527 1009 aaKnown RBP eCLIP16.64■□□□□ 0.251e-7■□□□□ 9.5
GTF2I-212ENST00000573035 ANKRD18AQ8IVF6 992 aa16.64■□□□□ 0.25
GTF2I-212ENST00000573035 ARFGAP2Q8N6H7 521 aa16.64■□□□□ 0.25
GTF2I-212ENST00000573035 DCAF5Q96JK2 942 aa16.64■□□□□ 0.25
GTF2I-212ENST00000573035 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.64■□□□□ 0.254e-7■■■□□ 17
GTF2I-212ENST00000573035 SHANK2Q9UPX8 1470 aa16.64■□□□□ 0.25
GTF2I-212ENST00000573035 PHACTR2O75167 634 aa16.64■□□□□ 0.25
GTF2I-212ENST00000573035 ZFYVE27Q5T4F4 411 aa16.64■□□□□ 0.25
GTF2I-212ENST00000573035 WDR78Q5VTH9 848 aa16.64■□□□□ 0.25
GTF2I-212ENST00000573035 CEP57Q86XR8 500 aa16.64■□□□□ 0.25
GTF2I-212ENST00000573035 MRPL50Q8N5N7 158 aaKnown RBP16.64■□□□□ 0.25
GTF2I-212ENST00000573035 ATRIPQ8WXE1 791 aa16.64■□□□□ 0.25
GTF2I-212ENST00000573035 MYCBPQ99417 103 aaPredicted RBP16.64■□□□□ 0.25
GTF2I-212ENST00000573035 GCOM1H8Y6P7 765 aaPredicted RBP16.63■□□□□ 0.25
GTF2I-212ENST00000573035 MYZAPP0CAP1 466 aa16.63■□□□□ 0.25
GTF2I-212ENST00000573035 B4GALNT4Q76KP1 1039 aa16.63■□□□□ 0.25
GTF2I-212ENST00000573035 MAATS1Q7Z4T9 603 aa16.63■□□□□ 0.25
GTF2I-212ENST00000573035 FAM76AQ8TAV0 307 aa16.63■□□□□ 0.25
GTF2I-212ENST00000573035 JADE2Q9NQC1 790 aa16.63■□□□□ 0.25
GTF2I-212ENST00000573035 IFNKQ9P0W0 207 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms