RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 AKAP4Q5JQC9 854 aa8.42□□□□□ -1.06
PRPF8-204ENST00000572445 C2CD5Q86YS7 1000 aa8.42□□□□□ -1.06
PRPF8-204ENST00000572445 TTC5Q8N0Z6 440 aa8.42□□□□□ -1.06
PRPF8-204ENST00000572445 ZNF622Q969S3 477 aaKnown RBP eCLIP8.42□□□□□ -1.06
PRPF8-204ENST00000572445 PLEKHG2Q9H7P9 1386 aa8.42□□□□□ -1.06
PRPF8-204ENST00000572445 NRXN2Q9P2S2 1712 aa8.42□□□□□ -1.06
PRPF8-204ENST00000572445 COL3A1P02461 1466 aaPredicted RBP8.41□□□□□ -1.06
PRPF8-204ENST00000572445 FAM177BA6PVY3 158 aa8.41□□□□□ -1.06
PRPF8-204ENST00000572445 CFAP99D6REC4 459 aa8.41□□□□□ -1.06
PRPF8-204ENST00000572445 SMAPO00193 183 aa8.41□□□□□ -1.06
PRPF8-204ENST00000572445 DIAPH1O60610 1272 aaKnown RBP8.41□□□□□ -1.06
PRPF8-204ENST00000572445 CYP19A1P11511 503 aaPredicted RBP8.41□□□□□ -1.06
PRPF8-204ENST00000572445 KCNA3P22001 575 aa8.41□□□□□ -1.06
PRPF8-204ENST00000572445 APLP1P51693 650 aa8.41□□□□□ -1.06
PRPF8-204ENST00000572445 TBC1D9Q6ZT07 1266 aa8.41□□□□□ -1.06
PRPF8-204ENST00000572445 TATDN2Q93075 761 aa8.41□□□□□ -1.06
PRPF8-204ENST00000572445 PNMA3Q9UL41 463 aa8.41□□□□□ -1.06
PRPF8-204ENST00000572445 SLX4Q8IY92 1834 aa8.4□□□□□ -1.06
PRPF8-204ENST00000572445 CLSPNQ9HAW4 1339 aa8.4□□□□□ -1.06
PRPF8-204ENST00000572445 TOMM70O94826 608 aa8.4□□□□□ -1.06
PRPF8-204ENST00000572445 SERPINB2P05120 415 aa8.4□□□□□ -1.06
PRPF8-204ENST00000572445 TEFQ10587 303 aa8.4□□□□□ -1.06
PRPF8-204ENST00000572445 SLC39A7Q92504 469 aa8.4□□□□□ -1.06
PRPF8-204ENST00000572445 TSC1Q92574 1164 aa8.4□□□□□ -1.06
PRPF8-204ENST00000572445 BCL2L12Q9HB09 334 aa8.4□□□□□ -1.06
PRPF8-204ENST00000572445 DLG5Q8TDM6 1919 aa8.4□□□□□ -1.06
PRPF8-204ENST00000572445 DICER1Q9UPY3 1922 aaKnown RBP8.39□□□□□ -1.07
PRPF8-204ENST00000572445 KDM2BQ8NHM5 1336 aa8.39□□□□□ -1.07
PRPF8-204ENST00000572445 KCNQ3O43525 872 aa8.39□□□□□ -1.07
PRPF8-204ENST00000572445 GCGRP47871 477 aa8.39□□□□□ -1.07
PRPF8-204ENST00000572445 ARSIQ5FYB1 569 aa8.39□□□□□ -1.07
PRPF8-204ENST00000572445 TBC1D9BQ66K14 1250 aa8.39□□□□□ -1.07
PRPF8-204ENST00000572445 ZNF496Q96IT1 587 aaPredicted RBP8.39□□□□□ -1.07
PRPF8-204ENST00000572445 METRNQ9UJH8 293 aa8.39□□□□□ -1.07
PRPF8-204ENST00000572445 FER1L6Q2WGJ9 1857 aa8.38□□□□□ -1.07
PRPF8-204ENST00000572445 PRAMEF22A3QJZ6 481 aa8.38□□□□□ -1.07
PRPF8-204ENST00000572445 NBPF26B4DH59 902 aa8.38□□□□□ -1.07
PRPF8-204ENST00000572445 C21orf2O43822 256 aa8.38□□□□□ -1.07
PRPF8-204ENST00000572445 PRKAR2BP31323 418 aa8.38□□□□□ -1.07
PRPF8-204ENST00000572445 PRELPP51888 382 aa8.38□□□□□ -1.07
PRPF8-204ENST00000572445 USP46P62068 366 aa8.38□□□□□ -1.07
PRPF8-204ENST00000572445 NARFQ9UHQ1 456 aa8.38□□□□□ -1.07
PRPF8-204ENST00000572445 LAMB4A4D0S4 1761 aa8.38□□□□□ -1.07
PRPF8-204ENST00000572445 PPP1R3GB7ZBB8 358 aa8.37□□□□□ -1.07
PRPF8-204ENST00000572445 A1BGP04217 495 aa8.37□□□□□ -1.07
PRPF8-204ENST00000572445 SLC10A3P09131 477 aa8.37□□□□□ -1.07
PRPF8-204ENST00000572445 MTMR2Q13614 643 aa8.37□□□□□ -1.07
PRPF8-204ENST00000572445 DCTN1Q14203 1278 aa8.37□□□□□ -1.07
PRPF8-204ENST00000572445 MCM10Q7L590 875 aa8.37□□□□□ -1.07
PRPF8-204ENST00000572445 NGEFQ8N5V2 710 aa8.37□□□□□ -1.07
PRPF8-204ENST00000572445 HELBQ8NG08 1087 aaPredicted RBP8.37□□□□□ -1.07
PRPF8-204ENST00000572445 ZMIZ1Q9ULJ6 1067 aa8.37□□□□□ -1.07
PRPF8-204ENST00000572445 GNEQ9Y223 722 aaKnown RBP8.37□□□□□ -1.07
PRPF8-204ENST00000572445 ARFGEF2Q9Y6D5 1785 aa8.37□□□□□ -1.07
PRPF8-204ENST00000572445 HEG1Q9ULI3 1381 aa8.36□□□□□ -1.07
PRPF8-204ENST00000572445 GNAT3A8MTJ3 354 aa8.36□□□□□ -1.07
PRPF8-204ENST00000572445 TRIM6-TRIM34B2RNG4 842 aa8.36□□□□□ -1.07
PRPF8-204ENST00000572445 H0YIN7 160 aa8.36□□□□□ -1.07
PRPF8-204ENST00000572445 NFKBIEO00221 500 aa8.36□□□□□ -1.07
PRPF8-204ENST00000572445 STARD3NLO95772 234 aa8.36□□□□□ -1.07
PRPF8-204ENST00000572445 C7P10643 843 aa8.36□□□□□ -1.07
PRPF8-204ENST00000572445 TM4SF1P30408 202 aa8.36□□□□□ -1.07
PRPF8-204ENST00000572445 TTLL6Q8N841 843 aa8.36□□□□□ -1.07
PRPF8-204ENST00000572445 CNBD1Q8NA66 436 aa8.36□□□□□ -1.07
PRPF8-204ENST00000572445 STK32AQ8WU08 396 aa8.36□□□□□ -1.07
PRPF8-204ENST00000572445 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.36□□□□□ -1.07
PRPF8-204ENST00000572445 BTBD11A6QL63 1104 aa8.35□□□□□ -1.07
PRPF8-204ENST00000572445 GABBR2O75899 941 aa8.35□□□□□ -1.07
PRPF8-204ENST00000572445 U2AF1L5P0DN76 240 aaPredicted RBP8.35□□□□□ -1.07
PRPF8-204ENST00000572445 LMNB1P20700 586 aa8.35□□□□□ -1.07
PRPF8-204ENST00000572445 U2AF1Q01081 240 aaKnown RBP eCLIP8.35□□□□□ -1.07
PRPF8-204ENST00000572445 NR6A1Q15406 480 aa8.35□□□□□ -1.07
PRPF8-204ENST00000572445 PRR5LQ6MZQ0 368 aa8.35□□□□□ -1.07
PRPF8-204ENST00000572445 ZNF790Q6PG37 636 aa8.35□□□□□ -1.07
PRPF8-204ENST00000572445 OLFM4Q6UX06 510 aa8.35□□□□□ -1.07
PRPF8-204ENST00000572445 SMC1BQ8NDV3 1235 aa8.35□□□□□ -1.07
PRPF8-204ENST00000572445 IL17REQ8NFR9 667 aa8.35□□□□□ -1.07
PRPF8-204ENST00000572445 GAS2L2Q8NHY3 880 aa8.35□□□□□ -1.07
PRPF8-204ENST00000572445 PHACTR3Q96KR7 559 aa8.35□□□□□ -1.07
PRPF8-204ENST00000572445 LHX6Q9UPM6 363 aa8.35□□□□□ -1.07
PRPF8-204ENST00000572445 PIK3CDO00329 1044 aa8.34□□□□□ -1.07
PRPF8-204ENST00000572445 TCERG1O14776 1098 aaKnown RBP8.34□□□□□ -1.07
PRPF8-204ENST00000572445 POTEIP0CG38 1075 aa8.34□□□□□ -1.07
PRPF8-204ENST00000572445 POTEJP0CG39 1038 aa8.34□□□□□ -1.07
PRPF8-204ENST00000572445 HOXB3P14651 431 aaPredicted RBP8.34□□□□□ -1.07
PRPF8-204ENST00000572445 ST5P78524 1137 aa8.34□□□□□ -1.07
PRPF8-204ENST00000572445 PROX2Q3B8N5 592 aa8.34□□□□□ -1.07
PRPF8-204ENST00000572445 ERFEQ4G0M1 354 aa8.34□□□□□ -1.07
PRPF8-204ENST00000572445 COL13A1Q5TAT6 717 aaPredicted RBP8.34□□□□□ -1.07
PRPF8-204ENST00000572445 TMEM164Q5U3C3 297 aa8.34□□□□□ -1.07
PRPF8-204ENST00000572445 PHLDB3Q6NSJ2 640 aa8.34□□□□□ -1.07
PRPF8-204ENST00000572445 SLC51AQ86UW1 340 aa8.34□□□□□ -1.07
PRPF8-204ENST00000572445 DZIP3Q86Y13 1208 aaKnown RBP8.34□□□□□ -1.07
PRPF8-204ENST00000572445 KLRG1Q96E93 195 aa8.34□□□□□ -1.07
PRPF8-204ENST00000572445 CFAP53Q96M91 514 aa8.34□□□□□ -1.07
PRPF8-204ENST00000572445 FMNL2Q96PY5 1086 aa8.34□□□□□ -1.07
PRPF8-204ENST00000572445 MIS18AQ9NYP9 233 aa8.34□□□□□ -1.07
PRPF8-204ENST00000572445 MKRN1Q9UHC7 482 aaKnown RBP8.34□□□□□ -1.07
PRPF8-204ENST00000572445 NUP98P52948 1817 aa8.33□□□□□ -1.08
PRPF8-204ENST00000572445 A0A087WZG4 1122 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms