RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 METTL14Q9HCE5 456 aaKnown RBP10.69□□□□□ -0.7
TVP23A-205ENST00000572428 RGS12O14924 1447 aa10.69□□□□□ -0.7
TVP23A-205ENST00000572428 NBPF3Q9H094 633 aa10.69□□□□□ -0.7
TVP23A-205ENST00000572428 KLHL33A6NCF5 533 aa10.68□□□□□ -0.7
TVP23A-205ENST00000572428 CABP4P57796 275 aa10.68□□□□□ -0.7
TVP23A-205ENST00000572428 GNL3LQ9NVN8 582 aaKnown RBP10.68□□□□□ -0.7
TVP23A-205ENST00000572428 MAGEC2Q9UBF1 373 aaPredicted RBP10.68□□□□□ -0.7
TVP23A-205ENST00000572428 PXDNLA1KZ92 1463 aa10.68□□□□□ -0.7
TVP23A-205ENST00000572428 KCNQ3O43525 872 aa10.68□□□□□ -0.7
TVP23A-205ENST00000572428 GIGYF1O75420 1035 aaPredicted RBP10.68□□□□□ -0.7
TVP23A-205ENST00000572428 KRT24Q2M2I5 525 aa10.68□□□□□ -0.7
TVP23A-205ENST00000572428 ZNF772Q68DY9 489 aaPredicted RBP10.68□□□□□ -0.7
TVP23A-205ENST00000572428 DDX54Q8TDD1 881 aaKnown RBP10.68□□□□□ -0.7
TVP23A-205ENST00000572428 COG6Q9Y2V7 657 aa10.68□□□□□ -0.7
TVP23A-205ENST00000572428 PANK1Q8TE04 598 aa10.68□□□□□ -0.7
TVP23A-205ENST00000572428 EFCC1Q9HA90 598 aa10.68□□□□□ -0.7
TVP23A-205ENST00000572428 ARFGEF2Q9Y6D5 1785 aa10.67□□□□□ -0.7
TVP23A-205ENST00000572428 ECEL1O95672 775 aa10.67□□□□□ -0.7
TVP23A-205ENST00000572428 IBTKQ9P2D0 1353 aaPredicted RBP10.67□□□□□ -0.7
TVP23A-205ENST00000572428 PPP4CP60510 307 aa10.67□□□□□ -0.7
TVP23A-205ENST00000572428 FAM98CQ17RN3 349 aaKnown RBP10.67□□□□□ -0.7
TVP23A-205ENST00000572428 DONSONQ9NYP3 566 aa10.67□□□□□ -0.7
TVP23A-205ENST00000572428 KLF15Q9UIH9 416 aa10.67□□□□□ -0.7
TVP23A-205ENST00000572428 CIZ1Q9ULV3 898 aaPredicted RBP10.67□□□□□ -0.7
TVP23A-205ENST00000572428 SYNPO2Q9UMS6 1093 aa10.67□□□□□ -0.7
TVP23A-205ENST00000572428 ZNF232Q9UNY5 417 aa10.67□□□□□ -0.7
TVP23A-205ENST00000572428 CD151P48509 253 aa10.66□□□□□ -0.7
TVP23A-205ENST00000572428 PTPRCP08575 1304 aa10.66□□□□□ -0.7
TVP23A-205ENST00000572428 LIG1P18858 919 aa10.66□□□□□ -0.7
TVP23A-205ENST00000572428 E2F5Q15329 346 aa10.66□□□□□ -0.7
TVP23A-205ENST00000572428 SMC5Q8IY18 1101 aa10.66□□□□□ -0.7
TVP23A-205ENST00000572428 MVPQ14764 893 aaKnown RBP10.66□□□□□ -0.7
TVP23A-205ENST00000572428 CCDC30Q5VVM6 783 aa10.66□□□□□ -0.7
TVP23A-205ENST00000572428 DZIP1LQ8IYY4 767 aaKnown RBP10.66□□□□□ -0.7
TVP23A-205ENST00000572428 PIGBQ92521 554 aa10.66□□□□□ -0.7
TVP23A-205ENST00000572428 QTRT2Q9H974 415 aaKnown RBP10.66□□□□□ -0.7
TVP23A-205ENST00000572428 POLA2Q14181 598 aa10.65□□□□□ -0.7
TVP23A-205ENST00000572428 FAM161AQ3B820 660 aa10.65□□□□□ -0.7
TVP23A-205ENST00000572428 C22orf23Q9BZE7 217 aa10.65□□□□□ -0.7
TVP23A-205ENST00000572428 LRRC27Q9C0I9 530 aa10.65□□□□□ -0.7
TVP23A-205ENST00000572428 ABCC4O15439 1325 aa10.65□□□□□ -0.7
TVP23A-205ENST00000572428 TNS1Q9HBL0 1735 aaKnown RBP10.65□□□□□ -0.7
TVP23A-205ENST00000572428 CCDC194A0A1B0GVG4 234 aa10.65□□□□□ -0.7
TVP23A-205ENST00000572428 ZRANB2O95218 330 aaKnown RBP eCLIP10.65□□□□□ -0.7
TVP23A-205ENST00000572428 ABCD1P33897 745 aa10.65□□□□□ -0.7
TVP23A-205ENST00000572428 ATF7IPQ6VMQ6 1270 aa10.65□□□□□ -0.7
TVP23A-205ENST00000572428 FMNL2Q96PY5 1086 aa10.65□□□□□ -0.7
TVP23A-205ENST00000572428 TMOD3Q9NYL9 352 aa10.65□□□□□ -0.7
TVP23A-205ENST00000572428 ERBB4Q15303 1308 aa10.65□□□□□ -0.71
TVP23A-205ENST00000572428 ANKRD36CQ5JPF3 1778 aa10.65□□□□□ -0.71
TVP23A-205ENST00000572428 NOB1Q9ULX3 412 aaKnown RBP10.64□□□□□ -0.71
TVP23A-205ENST00000572428 DIS3Q9Y2L1 958 aaKnown RBP10.64□□□□□ -0.71
TVP23A-205ENST00000572428 ESPNB1AK53 854 aa10.64□□□□□ -0.71
TVP23A-205ENST00000572428 WDHD1O75717 1129 aaPredicted RBP10.64□□□□□ -0.71
TVP23A-205ENST00000572428 ZNF496Q96IT1 587 aaPredicted RBP10.64□□□□□ -0.71
TVP23A-205ENST00000572428 ATG3Q9NT62 314 aa10.64□□□□□ -0.71
TVP23A-205ENST00000572428 SNRPA1P09661 255 aaKnown RBP10.64□□□□□ -0.71
TVP23A-205ENST00000572428 RLBP1P12271 317 aa10.64□□□□□ -0.71
TVP23A-205ENST00000572428 TRIM27P14373 513 aa10.64□□□□□ -0.71
TVP23A-205ENST00000572428 BCL2L13Q9BXK5 485 aa10.64□□□□□ -0.71
TVP23A-205ENST00000572428 IQSEC3Q9UPP2 1182 aaPredicted RBP10.64□□□□□ -0.71
TVP23A-205ENST00000572428 BCORQ6W2J9 1755 aa10.64□□□□□ -0.71
TVP23A-205ENST00000572428 ELL2O00472 640 aaPredicted RBP10.63□□□□□ -0.71
TVP23A-205ENST00000572428 RBM6P78332 1123 aaKnown RBP10.63□□□□□ -0.71
TVP23A-205ENST00000572428 SLC39A6Q13433 755 aa10.63□□□□□ -0.71
TVP23A-205ENST00000572428 LRP10Q7Z4F1 713 aa10.63□□□□□ -0.71
TVP23A-205ENST00000572428 RWDD1Q9H446 243 aaPredicted RBP10.63□□□□□ -0.71
TVP23A-205ENST00000572428 DDX19BQ9UMR2 479 aa10.63□□□□□ -0.71
TVP23A-205ENST00000572428 AFDNP55196 1824 aaKnown RBP10.63□□□□□ -0.71
TVP23A-205ENST00000572428 TULP2O00295 520 aa10.63□□□□□ -0.71
TVP23A-205ENST00000572428 TGFB3P10600 412 aa10.63□□□□□ -0.71
TVP23A-205ENST00000572428 PDIA6Q15084 440 aa10.63□□□□□ -0.71
TVP23A-205ENST00000572428 TTC5Q8N0Z6 440 aa10.63□□□□□ -0.71
TVP23A-205ENST00000572428 NOL10Q9BSC4 688 aaKnown RBP10.63□□□□□ -0.71
TVP23A-205ENST00000572428 RGS17Q9UGC6 210 aaPredicted RBP10.63□□□□□ -0.71
TVP23A-205ENST00000572428 MYH14Q7Z406 1995 aaKnown RBP10.63□□□□□ -0.71
TVP23A-205ENST00000572428 CTAGE5O15320 804 aa10.62□□□□□ -0.71
TVP23A-205ENST00000572428 IPO7O95373 1038 aaKnown RBP10.62□□□□□ -0.71
TVP23A-205ENST00000572428 SLC4A3P48751 1232 aa10.62□□□□□ -0.71
TVP23A-205ENST00000572428 INHBEP58166 350 aa10.62□□□□□ -0.71
TVP23A-205ENST00000572428 MAP3K20Q9NYL2 800 aaKnown RBP10.62□□□□□ -0.71
TVP23A-205ENST00000572428 SEPT12Q8IYM1 358 aa10.62□□□□□ -0.71
TVP23A-205ENST00000572428 PHC3Q8NDX5 983 aa10.62□□□□□ -0.71
TVP23A-205ENST00000572428 RSPH1Q8WYR4 309 aa10.62□□□□□ -0.71
TVP23A-205ENST00000572428 SPOCK2Q92563 424 aa10.62□□□□□ -0.71
TVP23A-205ENST00000572428 CCDC85AQ96PX6 553 aaPredicted RBP10.62□□□□□ -0.71
TVP23A-205ENST00000572428 CXorf56Q9H5V9 222 aa10.62□□□□□ -0.71
TVP23A-205ENST00000572428 ATP10DQ9P241 1426 aa10.62□□□□□ -0.71
TVP23A-205ENST00000572428 API5Q9BZZ5 524 aaKnown RBP10.62□□□□□ -0.71
TVP23A-205ENST00000572428 TERF1P54274 439 aa10.61□□□□□ -0.71
TVP23A-205ENST00000572428 SF3B2Q13435 895 aaKnown RBP10.61□□□□□ -0.71
TVP23A-205ENST00000572428 SUDS3Q9H7L9 328 aaPredicted RBP10.61□□□□□ -0.71
TVP23A-205ENST00000572428 DBF4Q9UBU7 674 aaPredicted RBP10.61□□□□□ -0.71
TVP23A-205ENST00000572428 FLT3P36888 993 aa10.61□□□□□ -0.71
TVP23A-205ENST00000572428 HMGN5P82970 282 aaKnown RBP10.61□□□□□ -0.71
TVP23A-205ENST00000572428 IFT88Q13099 833 aa10.61□□□□□ -0.71
TVP23A-205ENST00000572428 C16orf87Q6PH81 154 aa10.61□□□□□ -0.71
TVP23A-205ENST00000572428 KIAA1211Q6ZU35 1233 aa10.61□□□□□ -0.71
TVP23A-205ENST00000572428 TEX13AQ9BXU3 409 aaPredicted RBP10.61□□□□□ -0.71
TVP23A-205ENST00000572428 RMI1Q9H9A7 625 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms