RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 EIF2S2P20042 333 aaKnown RBP17.47■□□□□ 0.39
RPAIN-209ENST00000571558 PDIA6Q15084 440 aa17.47■□□□□ 0.39
RPAIN-209ENST00000571558 HSP90AB3PQ58FF7 597 aa17.47■□□□□ 0.39
RPAIN-209ENST00000571558 RGMBQ6NW40 437 aa17.47■□□□□ 0.39
RPAIN-209ENST00000571558 C2orf69Q8N8R5 385 aa17.47■□□□□ 0.39
RPAIN-209ENST00000571558 NECTIN2Q92692 538 aa17.47■□□□□ 0.39
RPAIN-209ENST00000571558 DDX46Q7L014 1031 aaKnown RBP17.47■□□□□ 0.39
RPAIN-209ENST00000571558 SLC51AQ86UW1 340 aa17.47■□□□□ 0.39
RPAIN-209ENST00000571558 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
RPAIN-209ENST00000571558 TRPM4Q8TD43 1214 aa17.47■□□□□ 0.39
RPAIN-209ENST00000571558 CHPF2Q9P2E5 772 aa17.47■□□□□ 0.39
RPAIN-209ENST00000571558 FAM155AB1AL88 458 aaPredicted RBP17.46■□□□□ 0.39
RPAIN-209ENST00000571558 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
RPAIN-209ENST00000571558 LRP10Q7Z4F1 713 aa17.46■□□□□ 0.39
RPAIN-209ENST00000571558 USP48Q86UV5 1035 aa17.46■□□□□ 0.39
RPAIN-209ENST00000571558 MICALL2Q8IY33 904 aa17.46■□□□□ 0.39
RPAIN-209ENST00000571558 STK31Q9BXU1 1019 aa17.46■□□□□ 0.39
RPAIN-209ENST00000571558 GBA2Q9HCG7 927 aaPredicted RBP17.46■□□□□ 0.39
RPAIN-209ENST00000571558 DBF4Q9UBU7 674 aaPredicted RBP17.46■□□□□ 0.39
RPAIN-209ENST00000571558 KIF16BQ96L93 1317 aa17.45■□□□□ 0.38
RPAIN-209ENST00000571558 RPS12P25398 132 aaKnown RBP17.45■□□□□ 0.38
RPAIN-209ENST00000571558 GRAPQ13588 217 aa17.45■□□□□ 0.38
RPAIN-209ENST00000571558 PROSER3Q2NL68 480 aa17.45■□□□□ 0.38
RPAIN-209ENST00000571558 G2E3Q7L622 706 aa17.45■□□□□ 0.38
RPAIN-209ENST00000571558 KRT26Q7Z3Y9 468 aa17.45■□□□□ 0.38
RPAIN-209ENST00000571558 GRAPLQ8TC17 118 aaPredicted RBP17.45■□□□□ 0.38
RPAIN-209ENST00000571558 ZIC5Q96T25 663 aa17.45■□□□□ 0.38
RPAIN-209ENST00000571558 YDJCA8MPS7 323 aa17.44■□□□□ 0.38
RPAIN-209ENST00000571558 PLIN1O60240 522 aa17.44■□□□□ 0.38
RPAIN-209ENST00000571558 DCPSQ96C86 337 aaKnown RBP17.44■□□□□ 0.38
RPAIN-209ENST00000571558 NOB1Q9ULX3 412 aaKnown RBP17.44■□□□□ 0.38
RPAIN-209ENST00000571558 PRPF38BQ5VTL8 546 aaKnown RBP17.43■□□□□ 0.38
RPAIN-209ENST00000571558 ANXA1P04083 346 aa17.42■□□□□ 0.38
RPAIN-209ENST00000571558 ZNF157P51786 506 aaPredicted RBP17.42■□□□□ 0.38
RPAIN-209ENST00000571558 KIF23Q02241 960 aaPredicted RBP17.42■□□□□ 0.38
RPAIN-209ENST00000571558 WASHC4Q2M389 1173 aa17.42■□□□□ 0.38
RPAIN-209ENST00000571558 NLRP10Q86W26 655 aa17.42■□□□□ 0.38
RPAIN-209ENST00000571558 ARHGAP45Q92619 1136 aa17.42■□□□□ 0.38
RPAIN-209ENST00000571558 RNF186Q9NXI6 227 aa17.42■□□□□ 0.38
RPAIN-209ENST00000571558 SH3TC1Q8TE82 1336 aa17.42■□□□□ 0.38
RPAIN-209ENST00000571558 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.41■□□□□ 0.38
RPAIN-209ENST00000571558 FRAT1Q92837 279 aaPredicted RBP17.41■□□□□ 0.38
RPAIN-209ENST00000571558 PHAXQ9H814 394 aaKnown RBP17.41■□□□□ 0.38
RPAIN-209ENST00000571558 HYPKQ9NX55 129 aa17.41■□□□□ 0.38
RPAIN-209ENST00000571558 ANKRD36CQ5JPF3 1778 aa17.41■□□□□ 0.38
RPAIN-209ENST00000571558 CACNA1FO60840 1977 aa17.41■□□□□ 0.38
RPAIN-209ENST00000571558 PTPRCP08575 1304 aa17.41■□□□□ 0.38
RPAIN-209ENST00000571558 TRPA1O75762 1119 aa17.4■□□□□ 0.38
RPAIN-209ENST00000571558 TRIM27P14373 513 aa17.4■□□□□ 0.38
RPAIN-209ENST00000571558 FLIIQ13045 1269 aa17.4■□□□□ 0.38
RPAIN-209ENST00000571558 ZKSCAN2Q63HK3 967 aa17.4■□□□□ 0.38
RPAIN-209ENST00000571558 SAMD7Q7Z3H4 446 aa17.4■□□□□ 0.38
RPAIN-209ENST00000571558 CTU1Q7Z7A3 348 aaKnown RBP17.4■□□□□ 0.38
RPAIN-209ENST00000571558 TRMT112Q9UI30 125 aaKnown RBP17.4■□□□□ 0.38
RPAIN-209ENST00000571558 TNNQ9UQP3 1299 aa17.4■□□□□ 0.38
RPAIN-209ENST00000571558 PSMD14O00487 310 aa17.39■□□□□ 0.38
RPAIN-209ENST00000571558 IPO8O15397 1037 aaKnown RBP17.39■□□□□ 0.38
RPAIN-209ENST00000571558 HCLS1P14317 486 aaPredicted RBP17.39■□□□□ 0.38
RPAIN-209ENST00000571558 TCIRG1Q13488 830 aa17.39■□□□□ 0.38
RPAIN-209ENST00000571558 PKN2Q16513 984 aaKnown RBP17.39■□□□□ 0.38
RPAIN-209ENST00000571558 C20orf194Q5TEA3 1177 aa17.39■□□□□ 0.38
RPAIN-209ENST00000571558 ATF7IPQ6VMQ6 1270 aa17.39■□□□□ 0.38
RPAIN-209ENST00000571558 ZBTB12Q9Y330 459 aaPredicted RBP17.39■□□□□ 0.38
RPAIN-209ENST00000571558 SHTN1A0MZ66 631 aa17.38■□□□□ 0.37
RPAIN-209ENST00000571558 SLC10A3P09131 477 aa17.38■□□□□ 0.37
RPAIN-209ENST00000571558 SOX10P56693 466 aa17.38■□□□□ 0.37
RPAIN-209ENST00000571558 PDE3AQ14432 1141 aa17.38■□□□□ 0.37
RPAIN-209ENST00000571558 TBC1D10BQ4KMP7 808 aaPredicted RBP17.38■□□□□ 0.37
RPAIN-209ENST00000571558 SULF1Q8IWU6 871 aa17.38■□□□□ 0.37
RPAIN-209ENST00000571558 CSRNP1Q96S65 589 aa17.38■□□□□ 0.37
RPAIN-209ENST00000571558 EYA3Q99504 573 aa17.38■□□□□ 0.37
RPAIN-209ENST00000571558 RLBP1P12271 317 aa17.38■□□□□ 0.37
RPAIN-209ENST00000571558 FKBP1BP68106 108 aa17.38■□□□□ 0.37
RPAIN-209ENST00000571558 COPS6Q7L5N1 327 aa17.38■□□□□ 0.37
RPAIN-209ENST00000571558 NSFL1CQ9UNZ2 370 aaKnown RBP17.38■□□□□ 0.37
RPAIN-209ENST00000571558 DUOX1Q9NRD9 1551 aa17.37■□□□□ 0.37
RPAIN-209ENST00000571558 SF3B3Q15393 1217 aaKnown RBP17.37■□□□□ 0.37
RPAIN-209ENST00000571558 API5Q9BZZ5 524 aaKnown RBP17.37■□□□□ 0.37
RPAIN-209ENST00000571558 LRRC37AA6NMS7 1700 aa17.37■□□□□ 0.37
RPAIN-209ENST00000571558 XAGE3Q8WTP9 111 aa17.36■□□□□ 0.37
RPAIN-209ENST00000571558 ADM5C9JUS6 153 aa17.35■□□□□ 0.37
RPAIN-209ENST00000571558 C6orf229H3BNL8 230 aa17.35■□□□□ 0.37
RPAIN-209ENST00000571558 EGFRP00533 1210 aa17.35■□□□□ 0.37
RPAIN-209ENST00000571558 FKBP5Q13451 457 aaPredicted RBP17.35■□□□□ 0.37
RPAIN-209ENST00000571558 KIF4BQ2VIQ3 1234 aa17.35■□□□□ 0.37
RPAIN-209ENST00000571558 DLK2Q6UY11 383 aa17.35■□□□□ 0.37
RPAIN-209ENST00000571558 PANK1Q8TE04 598 aa17.35■□□□□ 0.37
RPAIN-209ENST00000571558 DBNDD1Q9H9R9 158 aa17.35■□□□□ 0.37
RPAIN-209ENST00000571558 LAMB2P55268 1798 aa17.35■□□□□ 0.37
RPAIN-209ENST00000571558 ECE2O60344 883 aa17.34■□□□□ 0.37
RPAIN-209ENST00000571558 VIL1P09327 827 aaKnown RBP17.34■□□□□ 0.37
RPAIN-209ENST00000571558 RBM26Q5T8P6 1007 aaKnown RBP17.34■□□□□ 0.37
RPAIN-209ENST00000571558 DZIP1LQ8IYY4 767 aaKnown RBP17.34■□□□□ 0.37
RPAIN-209ENST00000571558 CLUAP1Q96AJ1 413 aa17.34■□□□□ 0.37
RPAIN-209ENST00000571558 POLLQ9UGP5 575 aa17.34■□□□□ 0.37
RPAIN-209ENST00000571558 ZNF609O15014 1411 aa17.33■□□□□ 0.37
RPAIN-209ENST00000571558 PI4KAP2A4QPH2 592 aa17.33■□□□□ 0.36
RPAIN-209ENST00000571558 MS4A1P11836 297 aa17.33■□□□□ 0.36
RPAIN-209ENST00000571558 IRX6P78412 446 aaPredicted RBP17.33■□□□□ 0.36
RPAIN-209ENST00000571558 NOM1Q5C9Z4 860 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms