RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 KIF4BQ2VIQ3 1234 aa12.89□□□□□ -0.35
PCDHGA4-201ENST00000571252 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
PCDHGA4-201ENST00000571252 MPHOSPH8Q99549 860 aa12.89□□□□□ -0.35
PCDHGA4-201ENST00000571252 CLTCQ00610 1675 aaKnown RBP12.89□□□□□ -0.35
PCDHGA4-201ENST00000571252 MCMDC2Q4G0Z9 681 aa12.89□□□□□ -0.35
PCDHGA4-201ENST00000571252 SMAP1Q8IYB5 467 aaPredicted RBP12.89□□□□□ -0.35
PCDHGA4-201ENST00000571252 AOX1Q06278 1338 aa12.89□□□□□ -0.35
PCDHGA4-201ENST00000571252 RIOK3O14730 519 aaKnown RBP12.89□□□□□ -0.35
PCDHGA4-201ENST00000571252 CPS1P31327 1500 aa12.89□□□□□ -0.35
PCDHGA4-201ENST00000571252 PTCH1Q13635 1447 aa12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 H0YHG0 523 aa12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 STIM1Q13586 685 aa12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 TRERF1Q96PN7 1200 aa12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 TMX1Q9H3N1 280 aa12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 ADGRB2O60241 1585 aa12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 SLU7O95391 586 aaKnown RBP12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 KIF5CO60282 957 aa12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 COPS6Q7L5N1 327 aa12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 TSC1Q92574 1164 aa12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 GTPBP4Q9BZE4 634 aaKnown RBP12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 DNAI1Q9UI46 699 aa12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 CEP131Q9UPN4 1083 aa12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 HOXC9P31274 260 aa12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 GTF2F1P35269 517 aaKnown RBP eCLIP12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 XAGE3Q8WTP9 111 aa12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 CPLX3Q8WVH0 158 aa12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 IBTKQ9P2D0 1353 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA4-201ENST00000571252 KLF18A0A0U1RQI7 1052 aa12.87□□□□□ -0.35
PCDHGA4-201ENST00000571252 GNG11P61952 73 aa12.87□□□□□ -0.35
PCDHGA4-201ENST00000571252 SAMD1Q6SPF0 538 aaPredicted RBP12.87□□□□□ -0.35
PCDHGA4-201ENST00000571252 KCNG4Q8TDN1 519 aa12.87□□□□□ -0.35
PCDHGA4-201ENST00000571252 NAPBQ9H115 298 aa12.87□□□□□ -0.35
PCDHGA4-201ENST00000571252 KIAA0232Q92628 1395 aa12.87□□□□□ -0.35
PCDHGA4-201ENST00000571252 MAP3K5Q99683 1374 aa12.87□□□□□ -0.35
PCDHGA4-201ENST00000571252 SYKP43405 635 aa12.87□□□□□ -0.35
PCDHGA4-201ENST00000571252 UBASH3AP57075 661 aa12.87□□□□□ -0.35
PCDHGA4-201ENST00000571252 CCDC102BQ68D86 513 aa12.87□□□□□ -0.35
PCDHGA4-201ENST00000571252 CCDC43Q96MW1 224 aaKnown RBP12.87□□□□□ -0.35
PCDHGA4-201ENST00000571252 TBX22Q9Y458 520 aa12.87□□□□□ -0.35
PCDHGA4-201ENST00000571252 MAPK8IP2Q13387 824 aaPredicted RBP12.87□□□□□ -0.35
PCDHGA4-201ENST00000571252 JAKMIP3Q5VZ66 844 aa12.87□□□□□ -0.35
PCDHGA4-201ENST00000571252 USP6P35125 1406 aa12.87□□□□□ -0.35
PCDHGA4-201ENST00000571252 LMOD1P29536 600 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA4-201ENST00000571252 IARSP41252 1262 aaKnown RBP12.86□□□□□ -0.35
PCDHGA4-201ENST00000571252 MICU3Q86XE3 530 aa12.86□□□□□ -0.35
PCDHGA4-201ENST00000571252 RICTORQ6R327 1708 aa12.86□□□□□ -0.35
PCDHGA4-201ENST00000571252 NBPF7P0C2Y1 421 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA4-201ENST00000571252 FEZ1Q99689 392 aa12.86□□□□□ -0.35
PCDHGA4-201ENST00000571252 GBP3Q9H0R5 595 aa12.86□□□□□ -0.35
PCDHGA4-201ENST00000571252 ZBTB3Q9H5J0 574 aa12.86□□□□□ -0.35
PCDHGA4-201ENST00000571252 SBNO1A3KN83 1393 aa12.86□□□□□ -0.35
PCDHGA4-201ENST00000571252 GOLGA8AA7E2F4 631 aa12.86□□□□□ -0.35
PCDHGA4-201ENST00000571252 IFIT5Q13325 482 aaKnown RBP12.86□□□□□ -0.35
PCDHGA4-201ENST00000571252 MAP2P11137 1827 aaKnown RBP12.86□□□□□ -0.35
PCDHGA4-201ENST00000571252 AKAP4Q5JQC9 854 aa12.86□□□□□ -0.35
PCDHGA4-201ENST00000571252 LRP2BPQ9P2M1 347 aa12.86□□□□□ -0.35
PCDHGA4-201ENST00000571252 IFIT3O14879 490 aaKnown RBP12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 HMGB2P26583 209 aaKnown RBP12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 SLC39A6Q13433 755 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 NCOA7Q8NI08 942 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 LRRC59Q96AG4 307 aaKnown RBP12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 SLC12A7Q9Y666 1083 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 ERBB4Q15303 1308 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 CCDC196A0A1B0GTZ2 297 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 CCDC144CPQ8IYA2 1237 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 DEF6Q9H4E7 631 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 CBX8Q9HC52 389 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 GNL3LQ9NVN8 582 aaKnown RBP12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 PTPDC1A2A3K4 754 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 GOLGA6L9A6NEM1 432 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 LMBR1LQ6UX01 489 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 FAM227BQ96M60 508 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 ZSWIM4Q9H7M6 989 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 PPP1R1BQ9UD71 204 aaPredicted RBP12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 EPS15P42566 896 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 CDR1P51861 262 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 APOBRQ0VD83 1088 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 ZNF397Q8NF99 534 aaPredicted RBP12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 ANKRD24Q8TF21 1146 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 PRM3Q9NNZ6 103 aa12.85□□□□□ -0.35
PCDHGA4-201ENST00000571252 SLC27A2O14975 620 aa12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 FAM193AP78312 1265 aa12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 USP44Q9H0E7 712 aa12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 SNRPA1P09661 255 aaKnown RBP12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 RPS6KB1P23443 525 aa12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 METAP2P50579 478 aaKnown RBP eCLIP12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 EIF5P55010 431 aaKnown RBP12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 HSP90AA4PQ58FG1 418 aa12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 DHX32Q7L7V1 743 aaKnown RBP12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 CHST3Q7LGC8 479 aa12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 SPTLC2O15270 562 aa12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 U2AF2P26368 475 aaKnown RBP eCLIP12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 MARCKSP29966 332 aaPredicted RBP12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 CCDC181Q5TID7 509 aa12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 IL17REQ8NFR9 667 aa12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 ABCF2Q9UG63 623 aa12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 KIAA1328Q86T90 577 aa12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 LEO1Q8WVC0 666 aaPredicted RBP12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 CWC25Q9NXE8 425 aaPredicted RBP12.84□□□□□ -0.35
PCDHGA4-201ENST00000571252 OGFRQ9NZT2 677 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 385.5 ms