RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 TTC14Q96N46 770 aa6.87□□□□□ -1.31
CDH13-213ENST00000569454 PLA2G12BQ9BX93 195 aa6.87□□□□□ -1.31
CDH13-213ENST00000569454 STRN4Q9NRL3 753 aa6.87□□□□□ -1.31
CDH13-213ENST00000569454 PALD1Q9ULE6 856 aa6.87□□□□□ -1.31
CDH13-213ENST00000569454 LIMCH1Q9UPQ0 1083 aa6.87□□□□□ -1.31
CDH13-213ENST00000569454 THRAP3Q9Y2W1 955 aaKnown RBP6.87□□□□□ -1.31
CDH13-213ENST00000569454 SNX14Q9Y5W7 946 aa6.87□□□□□ -1.31
CDH13-213ENST00000569454 CYP46A1Q9Y6A2 500 aa6.87□□□□□ -1.31
CDH13-213ENST00000569454 ROBO1Q9Y6N7 1651 aa6.87□□□□□ -1.31
CDH13-213ENST00000569454 BCL9O00512 1426 aa6.86□□□□□ -1.31
CDH13-213ENST00000569454 ZNF609O15014 1411 aa6.86□□□□□ -1.31
CDH13-213ENST00000569454 RPAP1Q9BWH6 1393 aaPredicted RBP6.86□□□□□ -1.31
CDH13-213ENST00000569454 CDHR2Q9BYE9 1310 aa6.86□□□□□ -1.31
CDH13-213ENST00000569454 BRD1O95696 1058 aa6.86□□□□□ -1.31
CDH13-213ENST00000569454 PCCAP05165 728 aaPredicted RBP6.86□□□□□ -1.31
CDH13-213ENST00000569454 R3HDM1Q15032 1099 aaKnown RBP6.86□□□□□ -1.31
CDH13-213ENST00000569454 CSPP1Q1MSJ5 1256 aa6.86□□□□□ -1.31
CDH13-213ENST00000569454 TSGA10IPQ3SY00 556 aa6.86□□□□□ -1.31
CDH13-213ENST00000569454 LMBR1LQ6UX01 489 aa6.86□□□□□ -1.31
CDH13-213ENST00000569454 DDX54Q8TDD1 881 aaKnown RBP6.86□□□□□ -1.31
CDH13-213ENST00000569454 MAP4K1Q92918 833 aa6.86□□□□□ -1.31
CDH13-213ENST00000569454 SYAP1Q96A49 352 aaPredicted RBP6.86□□□□□ -1.31
CDH13-213ENST00000569454 HAUS7Q99871 368 aa6.86□□□□□ -1.31
CDH13-213ENST00000569454 ISCA1Q9BUE6 129 aa6.86□□□□□ -1.31
CDH13-213ENST00000569454 SIL1Q9H173 461 aa6.86□□□□□ -1.31
CDH13-213ENST00000569454 ALDH8A1Q9H2A2 487 aaPredicted RBP6.86□□□□□ -1.31
CDH13-213ENST00000569454 ZSWIM6Q9HCJ5 1215 aa6.86□□□□□ -1.31
CDH13-213ENST00000569454 AKAP2Q9Y2D5 859 aa6.86□□□□□ -1.31
CDH13-213ENST00000569454 DDX49Q9Y6V7 483 aaKnown RBP6.86□□□□□ -1.31
CDH13-213ENST00000569454 UNC79Q9P2D8 2635 aa6.86□□□□□ -1.31
CDH13-213ENST00000569454 COL16A1Q07092 1604 aaPredicted RBP6.86□□□□□ -1.31
CDH13-213ENST00000569454 MAP3K15Q6ZN16 1313 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 SH3TC1Q8TE82 1336 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 EYA2O00167 538 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 PTCD1O75127 700 aaKnown RBP6.85□□□□□ -1.31
CDH13-213ENST00000569454 PHF14O94880 888 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 MAP4K4O95819 1239 aaPredicted RBP6.85□□□□□ -1.31
CDH13-213ENST00000569454 HSP90B1P14625 803 aaKnown RBP6.85□□□□□ -1.31
CDH13-213ENST00000569454 CASTP20810 708 aaKnown RBP6.85□□□□□ -1.31
CDH13-213ENST00000569454 PDCP20941 246 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 APLP1P51693 650 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 FOXO4P98177 505 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 TFCP2Q12800 502 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 NMIQ13287 307 aaPredicted RBP6.85□□□□□ -1.31
CDH13-213ENST00000569454 TCIRG1Q13488 830 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 NECTIN1Q15223 517 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 CCDC57Q2TAC2 916 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 EPHA10Q5JZY3 1008 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 ZGPATQ8N5A5 531 aaKnown RBP6.85□□□□□ -1.31
CDH13-213ENST00000569454 JMYQ8N9B5 988 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 KBTBD3Q8NAB2 608 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 ANP32BQ92688 251 aaKnown RBP6.85□□□□□ -1.31
CDH13-213ENST00000569454 AK7Q96M32 723 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 UPF3BQ9BZI7 483 aaKnown RBP6.85□□□□□ -1.31
CDH13-213ENST00000569454 CCDC8Q9H0W5 538 aaPredicted RBP6.85□□□□□ -1.31
CDH13-213ENST00000569454 BTG4Q9NY30 223 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 PPP1R1BQ9UD71 204 aaPredicted RBP6.85□□□□□ -1.31
CDH13-213ENST00000569454 DBNLQ9UJU6 430 aaKnown RBP6.85□□□□□ -1.31
CDH13-213ENST00000569454 RBM8AQ9Y5S9 174 aaKnown RBP6.85□□□□□ -1.31
CDH13-213ENST00000569454 CUL9Q8IWT3 2517 aa6.85□□□□□ -1.31
CDH13-213ENST00000569454 NWD2Q9ULI1 1742 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 ERVV-1B6SEH8 477 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 ATP5J2-PTCD1G3V325 749 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 EXOC5O00471 708 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 ZFYP08048 801 aaPredicted RBP6.84□□□□□ -1.31
CDH13-213ENST00000569454 HMGB1P09429 215 aaKnown RBP6.84□□□□□ -1.31
CDH13-213ENST00000569454 NCLP19338 710 aaKnown RBP6.84□□□□□ -1.31
CDH13-213ENST00000569454 ZNF445P59923 1031 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 USPL1Q5W0Q7 1092 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 CREB3L3Q68CJ9 461 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 MCTP1Q6DN14 999 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 GIGYF2Q6Y7W6 1299 aaKnown RBP6.84□□□□□ -1.31
CDH13-213ENST00000569454 TTLL7Q6ZT98 887 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 RUFY3Q7L099 469 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 ZBTB38Q8NAP3 1195 aaPredicted RBP6.84□□□□□ -1.31
CDH13-213ENST00000569454 JAKMIP1Q96N16 626 aaKnown RBP6.84□□□□□ -1.31
CDH13-213ENST00000569454 IL25Q9H293 177 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 BOLA2Q9H3K6 86 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 ZBTB3Q9H5J0 574 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 QTRT2Q9H974 415 aaKnown RBP6.84□□□□□ -1.31
CDH13-213ENST00000569454 GRPEL1Q9HAV7 217 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 HELLSQ9NRZ9 838 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 PDRG1Q9NUG6 133 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 SMC3Q9UQE7 1217 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 CHMP3Q9Y3E7 222 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 ANKRD36CQ5JPF3 1778 aa6.84□□□□□ -1.31
CDH13-213ENST00000569454 AFF2P51816 1311 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 SLC27A2O14975 620 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 RGL2O15211 777 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 A1BGP04217 495 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 PLCG2P16885 1265 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 IL6STP40189 918 aaPredicted RBP6.83□□□□□ -1.32
CDH13-213ENST00000569454 AK2P54819 239 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 MCMDC2Q4G0Z9 681 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 PRPF40BQ6NWY9 871 aaKnown RBP6.83□□□□□ -1.32
CDH13-213ENST00000569454 BLOC1S2Q6QNY1 142 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 TMEM87AQ8NBN3 555 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 PIGBQ92521 554 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 DSCC1Q9BVC3 393 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 GZF1Q9H116 711 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms