RNA–Protein interactions for RNA: ENST00000569335.1

HERC2-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-211ENST00000569335 ITPKCQ96DU7 683 aa8.26□□□□□ -1.09
HERC2-211ENST00000569335 ZFAND3Q9H8U3 227 aa8.26□□□□□ -1.09
HERC2-211ENST00000569335 GDPD2Q9HCC8 539 aa8.26□□□□□ -1.09
HERC2-211ENST00000569335 NOB1Q9ULX3 412 aaKnown RBP8.26□□□□□ -1.09
HERC2-211ENST00000569335 KIF1AQ12756 1690 aa8.26□□□□□ -1.09
HERC2-211ENST00000569335 SULT6B1Q6IMI4 303 aa8.25□□□□□ -1.09
HERC2-211ENST00000569335 CCDC116Q8IYX3 515 aa8.25□□□□□ -1.09
HERC2-211ENST00000569335 GAS2L2Q8NHY3 880 aa8.25□□□□□ -1.09
HERC2-211ENST00000569335 API5Q9BZZ5 524 aaKnown RBP8.25□□□□□ -1.09
HERC2-211ENST00000569335 PRM3Q9NNZ6 103 aa8.25□□□□□ -1.09
HERC2-211ENST00000569335 GMPR2Q9P2T1 348 aaKnown RBP8.25□□□□□ -1.09
HERC2-211ENST00000569335 NOP58Q9Y2X3 529 aaKnown RBP8.25□□□□□ -1.09
HERC2-211ENST00000569335 PCDHB9Q9Y5E1 797 aa8.25□□□□□ -1.09
HERC2-211ENST00000569335 CAMTA1Q9Y6Y1 1673 aa8.24□□□□□ -1.09
HERC2-211ENST00000569335 ABCC6O95255 1503 aa8.24□□□□□ -1.09
HERC2-211ENST00000569335 ZIC2O95409 532 aaPredicted RBP8.24□□□□□ -1.09
HERC2-211ENST00000569335 BMP1P13497 986 aa8.24□□□□□ -1.09
HERC2-211ENST00000569335 HOXC9P31274 260 aa8.24□□□□□ -1.09
HERC2-211ENST00000569335 TWISTNBQ3B726 338 aaPredicted RBP8.24□□□□□ -1.09
HERC2-211ENST00000569335 INTS6LQ5JSJ4 861 aaKnown RBP8.24□□□□□ -1.09
HERC2-211ENST00000569335 KCNH5Q8NCM2 988 aa8.24□□□□□ -1.09
HERC2-211ENST00000569335 PTPRCP08575 1304 aa8.24□□□□□ -1.09
HERC2-211ENST00000569335 MED1Q15648 1581 aaPredicted RBP8.23□□□□□ -1.09
HERC2-211ENST00000569335 OVOS2A0A0G2JMS6 1433 aa8.23□□□□□ -1.09
HERC2-211ENST00000569335 ZBTB7BO15156 539 aaPredicted RBP8.23□□□□□ -1.09
HERC2-211ENST00000569335 IRF5Q13568 498 aa8.23□□□□□ -1.09
HERC2-211ENST00000569335 NBPF20Q3BBV1 942 aa8.23□□□□□ -1.09
HERC2-211ENST00000569335 PPP1R26Q5T8A7 1209 aaPredicted RBP8.23□□□□□ -1.09
HERC2-211ENST00000569335 INTS3Q68E01 1043 aaKnown RBP8.23□□□□□ -1.09
HERC2-211ENST00000569335 AEBP1Q8IUX7 1158 aa8.23□□□□□ -1.09
HERC2-211ENST00000569335 TMEM57Q8N5G2 664 aa8.23□□□□□ -1.09
HERC2-211ENST00000569335 IP6K1Q92551 441 aa8.23□□□□□ -1.09
HERC2-211ENST00000569335 ZNF775Q96BV0 537 aaPredicted RBP8.23□□□□□ -1.09
HERC2-211ENST00000569335 BCL2L13Q9BXK5 485 aa8.23□□□□□ -1.09
HERC2-211ENST00000569335 SENP2Q9HC62 589 aa8.23□□□□□ -1.09
HERC2-211ENST00000569335 TNNQ9UQP3 1299 aa8.23□□□□□ -1.09
HERC2-211ENST00000569335 USP19O94966 1318 aa8.23□□□□□ -1.09
HERC2-211ENST00000569335 TRPM3Q9HCF6 1732 aaPredicted RBP8.23□□□□□ -1.09
HERC2-211ENST00000569335 RGS12O14924 1447 aa8.22□□□□□ -1.09
HERC2-211ENST00000569335 ABL2P42684 1182 aa8.22□□□□□ -1.09
HERC2-211ENST00000569335 RAB15P59190 212 aa8.22□□□□□ -1.09
HERC2-211ENST00000569335 TRIM46Q7Z4K8 759 aa8.22□□□□□ -1.09
HERC2-211ENST00000569335 TSPYL6Q8N831 410 aa8.22□□□□□ -1.09
HERC2-211ENST00000569335 KIFC2Q96AC6 838 aa8.22□□□□□ -1.09
HERC2-211ENST00000569335 GCC1Q96CN9 775 aa8.22□□□□□ -1.09
HERC2-211ENST00000569335 TRIM47Q96LD4 638 aa8.22□□□□□ -1.09
HERC2-211ENST00000569335 CEMIPQ8WUJ3 1361 aa8.22□□□□□ -1.09
HERC2-211ENST00000569335 CACNA1FO60840 1977 aa8.21□□□□□ -1.09
HERC2-211ENST00000569335 AMPHP49418 695 aa8.21□□□□□ -1.1
HERC2-211ENST00000569335 ITPRIPQ8IWB1 547 aa8.21□□□□□ -1.1
HERC2-211ENST00000569335 C8orf58Q8NAV2 365 aa8.21□□□□□ -1.1
HERC2-211ENST00000569335 C1orf167Q5SNV9 1468 aa8.2□□□□□ -1.1
HERC2-211ENST00000569335 LTN1O94822 1766 aa8.2□□□□□ -1.1
HERC2-211ENST00000569335 ESPNB1AK53 854 aa8.2□□□□□ -1.1
HERC2-211ENST00000569335 GIGYF1O75420 1035 aaPredicted RBP8.2□□□□□ -1.1
HERC2-211ENST00000569335 NUCB1Q02818 461 aa8.2□□□□□ -1.1
HERC2-211ENST00000569335 DHX9Q08211 1270 aaKnown RBP8.2□□□□□ -1.1
HERC2-211ENST00000569335 FLIIQ13045 1269 aa8.2□□□□□ -1.1
HERC2-211ENST00000569335 MTHFSDQ2M296 383 aaKnown RBP8.2□□□□□ -1.1
HERC2-211ENST00000569335 ABTB2Q8N961 1025 aa8.2□□□□□ -1.1
HERC2-211ENST00000569335 THUMPD2Q9BTF0 503 aaKnown RBP8.2□□□□□ -1.1
HERC2-211ENST00000569335 CHMP4AQ9BY43 222 aa8.2□□□□□ -1.1
HERC2-211ENST00000569335 ZNF330Q9Y3S2 320 aaPredicted RBP8.2□□□□□ -1.1
HERC2-211ENST00000569335 LMO7Q8WWI1 1683 aa8.2□□□□□ -1.1
HERC2-211ENST00000569335 MSH6P52701 1360 aa8.2□□□□□ -1.1
HERC2-211ENST00000569335 MAP3K5Q99683 1374 aa8.2□□□□□ -1.1
HERC2-211ENST00000569335 N4BP2Q86UW6 1770 aaPredicted RBP8.2□□□□□ -1.1
HERC2-211ENST00000569335 ALS2Q96Q42 1657 aa8.19□□□□□ -1.1
HERC2-211ENST00000569335 ADAMTS7Q9UKP4 1686 aa8.19□□□□□ -1.1
HERC2-211ENST00000569335 FAM83GA6ND36 823 aa8.19□□□□□ -1.1
HERC2-211ENST00000569335 ERVH48-1M5A8F1 160 aa8.19□□□□□ -1.1
HERC2-211ENST00000569335 HOXB7P09629 217 aa8.19□□□□□ -1.1
HERC2-211ENST00000569335 POM121Q96HA1 1249 aa8.19□□□□□ -1.1
HERC2-211ENST00000569335 C19orf44Q9H6X5 657 aa8.19□□□□□ -1.1
HERC2-211ENST00000569335 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
HERC2-211ENST00000569335 IBTKQ9P2D0 1353 aaPredicted RBP8.19□□□□□ -1.1
HERC2-211ENST00000569335 PXDNLA1KZ92 1463 aa8.19□□□□□ -1.1
HERC2-211ENST00000569335 GNAT3A8MTJ3 354 aa8.18□□□□□ -1.1
HERC2-211ENST00000569335 EIF5BO60841 1220 aaKnown RBP8.18□□□□□ -1.1
HERC2-211ENST00000569335 SNRPBP14678 240 aaKnown RBP8.18□□□□□ -1.1
HERC2-211ENST00000569335 RGS3P49796 1198 aa8.18□□□□□ -1.1
HERC2-211ENST00000569335 VAC14Q08AM6 782 aa8.18□□□□□ -1.1
HERC2-211ENST00000569335 CBLBQ13191 982 aa8.18□□□□□ -1.1
HERC2-211ENST00000569335 MRPL14Q6P1L8 145 aaKnown RBP8.18□□□□□ -1.1
HERC2-211ENST00000569335 ERICH6Q7L0X2 663 aa8.18□□□□□ -1.1
HERC2-211ENST00000569335 ARHGEF25Q86VW2 580 aa8.18□□□□□ -1.1
HERC2-211ENST00000569335 RTF1Q92541 710 aaKnown RBP8.18□□□□□ -1.1
HERC2-211ENST00000569335 TMPRSS4Q9NRS4 437 aa8.18□□□□□ -1.1
HERC2-211ENST00000569335 MCCD1P59942 119 aaPredicted RBP8.17□□□□□ -1.1
HERC2-211ENST00000569335 AMOTQ4VCS5 1084 aa8.17□□□□□ -1.1
HERC2-211ENST00000569335 MCM10Q7L590 875 aa8.17□□□□□ -1.1
HERC2-211ENST00000569335 SKAP1Q86WV1 359 aa8.17□□□□□ -1.1
HERC2-211ENST00000569335 RPAP2Q8IXW5 612 aaPredicted RBP8.17□□□□□ -1.1
HERC2-211ENST00000569335 SEPT12Q8IYM1 358 aa8.17□□□□□ -1.1
HERC2-211ENST00000569335 MEIOBQ8N635 442 aa8.17□□□□□ -1.1
HERC2-211ENST00000569335 ZFP42Q96MM3 310 aa8.17□□□□□ -1.1
HERC2-211ENST00000569335 PURBQ96QR8 312 aaKnown RBP8.17□□□□□ -1.1
HERC2-211ENST00000569335 USP35Q9P2H5 1018 aa8.17□□□□□ -1.1
HERC2-211ENST00000569335 LAS1LQ9Y4W2 734 aaKnown RBP8.17□□□□□ -1.1
HERC2-211ENST00000569335 PSME1Q06323 249 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms