RNA–Protein interactions for RNA: ENST00000567479.1

KIFC3-231, Transcript of kinesin family member C3, human

TSL 4

Gene KIFC3, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-231	ENST00000567479	ZNF521	Q96K83	1311 aa		11.96	□□□□□ -0.49
KIFC3-231	ENST00000567479		F6X3S4	739 aa		11.96	□□□□□ -0.49
KIFC3-231	ENST00000567479		H7C1D1	291 aa		11.96	□□□□□ -0.49
KIFC3-231	ENST00000567479	ATP2B4	P23634	1241 aa		11.96	□□□□□ -0.49
KIFC3-231	ENST00000567479	DPF2	Q92785	391 aa		11.96	□□□□□ -0.49
KIFC3-231	ENST00000567479	GPR101	Q96P66	508 aa	Predicted RBP	11.96	□□□□□ -0.49
KIFC3-231	ENST00000567479	PLA2G12B	Q9BX93	195 aa		11.96	□□□□□ -0.49
KIFC3-231	ENST00000567479	MKRN1	Q9UHC7	482 aa	Known RBP	11.96	□□□□□ -0.49
KIFC3-231	ENST00000567479	XDH	P47989	1333 aa		11.95	□□□□□ -0.5
KIFC3-231	ENST00000567479	PSMD14	O00487	310 aa		11.95	□□□□□ -0.5
KIFC3-231	ENST00000567479	ECE2	O60344	883 aa		11.95	□□□□□ -0.5
KIFC3-231	ENST00000567479	CSF1R	P07333	972 aa		11.95	□□□□□ -0.5
KIFC3-231	ENST00000567479	IGHMBP2	P38935	993 aa	Known RBP	11.95	□□□□□ -0.5
KIFC3-231	ENST00000567479	CASP7	P55210	303 aa		11.95	□□□□□ -0.5
KIFC3-231	ENST00000567479	BEND3	Q5T5X7	828 aa		11.95	□□□□□ -0.5
KIFC3-231	ENST00000567479	KCNQ5	Q9NR82	932 aa		11.95	□□□□□ -0.5
KIFC3-231	ENST00000567479	MINPP1	Q9UNW1	487 aa		11.95	□□□□□ -0.5
KIFC3-231	ENST00000567479	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.95	□□□□□ -0.5
KIFC3-231	ENST00000567479	TAF1	P21675	1872 aa		11.94	□□□□□ -0.5
KIFC3-231	ENST00000567479		E9PSI1	815 aa		11.94	□□□□□ -0.5
KIFC3-231	ENST00000567479	ITGA6	P23229	1130 aa		11.94	□□□□□ -0.5
KIFC3-231	ENST00000567479	RPS12	P25398	132 aa	Known RBP	11.94	□□□□□ -0.5
KIFC3-231	ENST00000567479	ZC3H15	Q8WU90	426 aa	Known RBP	11.94	□□□□□ -0.5
KIFC3-231	ENST00000567479	PGAP2	Q9UHJ9	254 aa		11.94	□□□□□ -0.5
KIFC3-231	ENST00000567479	RTL9	Q8NET4	1388 aa		11.93	□□□□□ -0.5
KIFC3-231	ENST00000567479	CCER2	I3L3R5	266 aa		11.93	□□□□□ -0.5
KIFC3-231	ENST00000567479	VIL1	P09327	827 aa	Known RBP	11.93	□□□□□ -0.5
KIFC3-231	ENST00000567479	HIRA	P54198	1017 aa	Predicted RBP	11.93	□□□□□ -0.5
KIFC3-231	ENST00000567479	SLC4A10	Q6U841	1118 aa		11.93	□□□□□ -0.5
KIFC3-231	ENST00000567479	MICALL2	Q8IY33	904 aa		11.93	□□□□□ -0.5
KIFC3-231	ENST00000567479	MPHOSPH8	Q99549	860 aa		11.93	□□□□□ -0.5
KIFC3-231	ENST00000567479	DUOX1	Q9NRD9	1551 aa		11.92	□□□□□ -0.5
KIFC3-231	ENST00000567479	COL4A1	P02462	1669 aa		11.92	□□□□□ -0.5
KIFC3-231	ENST00000567479	SHTN1	A0MZ66	631 aa		11.92	□□□□□ -0.5
KIFC3-231	ENST00000567479	ANKRD18B	A2A2Z9	1011 aa		11.92	□□□□□ -0.5
KIFC3-231	ENST00000567479	CCT4	P50991	539 aa	Known RBP	11.92	□□□□□ -0.5
KIFC3-231	ENST00000567479	SLFN5	Q08AF3	891 aa		11.92	□□□□□ -0.5
KIFC3-231	ENST00000567479	DEFB115	Q30KQ5	88 aa		11.92	□□□□□ -0.5
KIFC3-231	ENST00000567479	FAM161A	Q3B820	660 aa		11.92	□□□□□ -0.5
KIFC3-231	ENST00000567479	PODN	Q7Z5L7	613 aa		11.92	□□□□□ -0.5
KIFC3-231	ENST00000567479	ANKRD2	Q9GZV1	360 aa		11.92	□□□□□ -0.5
KIFC3-231	ENST00000567479	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.92	□□□□□ -0.5
KIFC3-231	ENST00000567479	LEMD3	Q9Y2U8	911 aa		11.92	□□□□□ -0.5
KIFC3-231	ENST00000567479	CNTNAP1	P78357	1384 aa		11.92	□□□□□ -0.5
KIFC3-231	ENST00000567479	WTIP	A6NIX2	430 aa	Predicted RBP	11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	GRM8	O00222	908 aa		11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	TRAF5	O00463	557 aa		11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	ALDH1L1	O75891	902 aa		11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	VEGFB	P49765	207 aa		11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	FOXO4	P98177	505 aa		11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	FMR1	Q06787	632 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	IFIT5	Q13325	482 aa	Known RBP	11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	RBM26	Q5T8P6	1007 aa	Known RBP	11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	CDC37L1	Q7L3B6	337 aa		11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	SAMD7	Q7Z3H4	446 aa		11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	MRPL50	Q8N5N7	158 aa	Known RBP	11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	TRPM4	Q8TD43	1214 aa		11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	SRCIN1	Q9C0H9	1055 aa		11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	ABT1	Q9ULW3	272 aa	Known RBP	11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	CHMP3	Q9Y3E7	222 aa		11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	LRRC37A	A6NMS7	1700 aa		11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	LTBP1	Q14766	1721 aa		11.91	□□□□□ -0.5
KIFC3-231	ENST00000567479	ADAMTSL1	Q8N6G6	1762 aa		11.9	□□□□□ -0.5
KIFC3-231	ENST00000567479	USP17L3	A6NCW0	530 aa		11.9	□□□□□ -0.5
KIFC3-231	ENST00000567479	USP17L4	A6NCW7	530 aa		11.9	□□□□□ -0.5
KIFC3-231	ENST00000567479	RASSF10	A6NK89	507 aa		11.9	□□□□□ -0.5
KIFC3-231	ENST00000567479	HSPA1A	P0DMV8	641 aa	Known RBP	11.9	□□□□□ -0.5
KIFC3-231	ENST00000567479	HSPA1B	P0DMV9	641 aa	Known RBP	11.9	□□□□□ -0.5
KIFC3-231	ENST00000567479	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.9	□□□□□ -0.5
KIFC3-231	ENST00000567479	CST9	Q5W186	159 aa		11.9	□□□□□ -0.5
KIFC3-231	ENST00000567479	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.9	□□□□□ -0.5
KIFC3-231	ENST00000567479	LMBR1L	Q6UX01	489 aa		11.9	□□□□□ -0.5
KIFC3-231	ENST00000567479	USP17L1	Q7RTZ2	530 aa		11.9	□□□□□ -0.5
KIFC3-231	ENST00000567479	CDCA7L	Q96GN5	454 aa		11.9	□□□□□ -0.5
KIFC3-231	ENST00000567479	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.9	□□□□□ -0.5
KIFC3-231	ENST00000567479	ZNF804B	A4D1E1	1349 aa		11.89	□□□□□ -0.51
KIFC3-231	ENST00000567479	KCNJ4	P48050	445 aa		11.89	□□□□□ -0.51
KIFC3-231	ENST00000567479	CHRND	Q07001	517 aa		11.89	□□□□□ -0.51
KIFC3-231	ENST00000567479	CCDC57	Q2TAC2	916 aa		11.89	□□□□□ -0.51
KIFC3-231	ENST00000567479	IFFO2	Q5TF58	517 aa		11.89	□□□□□ -0.51
KIFC3-231	ENST00000567479	AGBL3	Q8NEM8	1001 aa		11.89	□□□□□ -0.51
KIFC3-231	ENST00000567479	DCPS	Q96C86	337 aa	Known RBP	11.89	□□□□□ -0.51
KIFC3-231	ENST00000567479	COA1	Q9GZY4	146 aa		11.89	□□□□□ -0.51
KIFC3-231	ENST00000567479	PTPRC	P08575	1304 aa		11.88	□□□□□ -0.51
KIFC3-231	ENST00000567479	CELF2	O95319	508 aa	Known RBP	11.88	□□□□□ -0.51
KIFC3-231	ENST00000567479	TAF7L	Q5H9L4	462 aa		11.88	□□□□□ -0.51
KIFC3-231	ENST00000567479	EPHA10	Q5JZY3	1008 aa		11.88	□□□□□ -0.51
KIFC3-231	ENST00000567479	USP48	Q86UV5	1035 aa		11.88	□□□□□ -0.51
KIFC3-231	ENST00000567479	SSH1	Q8WYL5	1049 aa		11.88	□□□□□ -0.51
KIFC3-231	ENST00000567479	MED23	Q9ULK4	1368 aa		11.88	□□□□□ -0.51
KIFC3-231	ENST00000567479	WDR33	Q9C0J8	1336 aa	Known RBP	11.87	□□□□□ -0.51
KIFC3-231	ENST00000567479	EGFR	P00533	1210 aa		11.87	□□□□□ -0.51
KIFC3-231	ENST00000567479	USP17L8	P0C7I0	530 aa		11.87	□□□□□ -0.51
KIFC3-231	ENST00000567479	ZNF280A	P59817	542 aa	Predicted RBP	11.87	□□□□□ -0.51
KIFC3-231	ENST00000567479	KIF4B	Q2VIQ3	1234 aa		11.87	□□□□□ -0.51
KIFC3-231	ENST00000567479	ALDH1L2	Q3SY69	923 aa		11.87	□□□□□ -0.51
KIFC3-231	ENST00000567479	LDHAL6A	Q6ZMR3	332 aa		11.87	□□□□□ -0.51
KIFC3-231	ENST00000567479	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.87	□□□□□ -0.51
KIFC3-231	ENST00000567479	TXNRD3	Q86VQ6	643 aa		11.87	□□□□□ -0.51
KIFC3-231	ENST00000567479	TRMT2A	Q8IZ69	625 aa	Known RBP	11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms