RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 GOLIM4O00461 696 aa16.79■□□□□ 0.28
CDH1-209ENST00000566510 LRMPQ12912 555 aa16.79■□□□□ 0.28
CDH1-209ENST00000566510 LMBR1LQ6UX01 489 aa16.79■□□□□ 0.28
CDH1-209ENST00000566510 PKNOX2Q96KN3 472 aa16.79■□□□□ 0.28
CDH1-209ENST00000566510 CFAP45Q9UL16 551 aa16.79■□□□□ 0.28
CDH1-209ENST00000566510 SIPA1L3O60292 1781 aaPredicted RBP16.79■□□□□ 0.28
CDH1-209ENST00000566510 PHRF1Q9P1Y6 1649 aaKnown RBP16.78■□□□□ 0.28
CDH1-209ENST00000566510 CCT2P78371 535 aaKnown RBP16.78■□□□□ 0.28
CDH1-209ENST00000566510 RESTQ13127 1097 aa16.78■□□□□ 0.28
CDH1-209ENST00000566510 C5P01031 1676 aa16.78■□□□□ 0.28
CDH1-209ENST00000566510 APOBRQ0VD83 1088 aa16.77■□□□□ 0.28
CDH1-209ENST00000566510 IFNL2Q8IZJ0 200 aa16.77■□□□□ 0.28
CDH1-209ENST00000566510 ZNF710Q8N1W2 664 aa16.77■□□□□ 0.28
CDH1-209ENST00000566510 HAUS7Q99871 368 aa16.77■□□□□ 0.28
CDH1-209ENST00000566510 FTOQ9C0B1 505 aaKnown RBP eCLIP16.77■□□□□ 0.28
CDH1-209ENST00000566510 KDM6AO15550 1401 aaPredicted RBP16.77■□□□□ 0.27
CDH1-209ENST00000566510 JCADQ9P266 1359 aa16.77■□□□□ 0.27
CDH1-209ENST00000566510 RIOK3O14730 519 aaKnown RBP16.77■□□□□ 0.27
CDH1-209ENST00000566510 TIMM10P62072 90 aa16.77■□□□□ 0.27
CDH1-209ENST00000566510 ZSCAN16Q9H4T2 348 aaPredicted RBP16.77■□□□□ 0.27
CDH1-209ENST00000566510 STOX1Q6ZVD7 989 aa16.76■□□□□ 0.27
CDH1-209ENST00000566510 CHST3Q7LGC8 479 aa16.76■□□□□ 0.27
CDH1-209ENST00000566510 FMNL2Q96PY5 1086 aa16.76■□□□□ 0.27
CDH1-209ENST00000566510 GOLGA6L19H0YKK7 550 aa16.76■□□□□ 0.27
CDH1-209ENST00000566510 GTF2F1P35269 517 aaKnown RBP eCLIP16.76■□□□□ 0.27
CDH1-209ENST00000566510 ZNF75DP51815 510 aa16.76■□□□□ 0.27
CDH1-209ENST00000566510 GUCY1B3Q02153 619 aa16.76■□□□□ 0.27
CDH1-209ENST00000566510 DDX17Q92841 729 aaKnown RBP16.76■□□□□ 0.27
CDH1-209ENST00000566510 CLIP2Q9UDT6 1046 aa16.76■□□□□ 0.27
CDH1-209ENST00000566510 AFDNP55196 1824 aaKnown RBP16.76■□□□□ 0.27
CDH1-209ENST00000566510 PROSER2Q86WR7 435 aaPredicted RBP16.75■□□□□ 0.27
CDH1-209ENST00000566510 KBTBD3Q8NAB2 608 aa16.75■□□□□ 0.27
CDH1-209ENST00000566510 C16orf45Q96MC5 204 aaPredicted RBP16.75■□□□□ 0.27
CDH1-209ENST00000566510 BCL2L12Q9HB09 334 aa16.75■□□□□ 0.27
CDH1-209ENST00000566510 CABP4P57796 275 aa16.75■□□□□ 0.27
CDH1-209ENST00000566510 CABLES1Q8TDN4 633 aa16.75■□□□□ 0.27
CDH1-209ENST00000566510 FBXW7Q969H0 707 aa16.75■□□□□ 0.27
CDH1-209ENST00000566510 CCDC94Q9BW85 323 aaPredicted RBP16.75■□□□□ 0.27
CDH1-209ENST00000566510 NCOA5Q9HCD5 579 aaKnown RBP16.75■□□□□ 0.27
CDH1-209ENST00000566510 SLIT3O75094 1523 aa16.75■□□□□ 0.27
CDH1-209ENST00000566510 CHRNA2Q15822 529 aa16.74■□□□□ 0.27
CDH1-209ENST00000566510 DHX32Q7L7V1 743 aaKnown RBP16.74■□□□□ 0.27
CDH1-209ENST00000566510 CCAR1Q8IX12 1150 aaKnown RBP16.74■□□□□ 0.27
CDH1-209ENST00000566510 PRDM10Q9NQV6 1147 aa16.74■□□□□ 0.27
CDH1-209ENST00000566510 PAG1Q9NWQ8 432 aa16.74■□□□□ 0.27
CDH1-209ENST00000566510 PTPDC1A2A3K4 754 aa16.74■□□□□ 0.27
CDH1-209ENST00000566510 RABL6Q3YEC7 729 aaPredicted RBP16.74■□□□□ 0.27
CDH1-209ENST00000566510 A0A0G2JLW4 131 aa16.73■□□□□ 0.27
CDH1-209ENST00000566510 RBM43Q6ZSC3 357 aaKnown RBP16.73■□□□□ 0.27
CDH1-209ENST00000566510 LRP10Q7Z4F1 713 aa16.73■□□□□ 0.27
CDH1-209ENST00000566510 A0A087WWV3 80 aa16.73■□□□□ 0.27
CDH1-209ENST00000566510 HMGB1P09429 215 aaKnown RBP16.73■□□□□ 0.27
CDH1-209ENST00000566510 TRHP20396 242 aaPredicted RBP16.73■□□□□ 0.27
CDH1-209ENST00000566510 ZSCAN25Q6NSZ9 544 aa16.73■□□□□ 0.27
CDH1-209ENST00000566510 PLA2G4DQ86XP0 818 aa16.73■□□□□ 0.27
CDH1-209ENST00000566510 NSUN7Q8NE18 718 aaKnown RBP16.73■□□□□ 0.27
CDH1-209ENST00000566510 TDRD7Q8NHU6 1098 aaKnown RBP16.73■□□□□ 0.27
CDH1-209ENST00000566510 MRC1P22897 1456 aa16.73■□□□□ 0.27
CDH1-209ENST00000566510 PFKFB2O60825 505 aa16.73■□□□□ 0.27
CDH1-209ENST00000566510 PPP4R3BQ5MIZ7 849 aa16.73■□□□□ 0.27
CDH1-209ENST00000566510 DCAF5Q96JK2 942 aa16.73■□□□□ 0.27
CDH1-209ENST00000566510 SCN11AQ9UI33 1791 aa16.72■□□□□ 0.27
CDH1-209ENST00000566510 CYP27B1O15528 508 aa16.72■□□□□ 0.27
CDH1-209ENST00000566510 ME1P48163 572 aa16.72■□□□□ 0.27
CDH1-209ENST00000566510 CCDC73Q6ZRK6 1079 aa16.72■□□□□ 0.27
CDH1-209ENST00000566510 PLBD2Q8NHP8 589 aa16.72■□□□□ 0.27
CDH1-209ENST00000566510 BCL11BQ9C0K0 894 aaPredicted RBP16.72■□□□□ 0.27
CDH1-209ENST00000566510 BECN2A8MW95 431 aa16.72■□□□□ 0.27
CDH1-209ENST00000566510 CTDNEP1O95476 244 aa16.72■□□□□ 0.27
CDH1-209ENST00000566510 ERCC4Q92889 916 aaPredicted RBP16.72■□□□□ 0.27
CDH1-209ENST00000566510 ZNF594Q96JF6 807 aaPredicted RBP16.72■□□□□ 0.27
CDH1-209ENST00000566510 C11orf57Q6ZUT1 292 aaPredicted RBP16.71■□□□□ 0.27
CDH1-209ENST00000566510 SMARCC2Q8TAQ2 1214 aa16.71■□□□□ 0.27
CDH1-209ENST00000566510 USP28Q96RU2 1077 aa16.71■□□□□ 0.27
CDH1-209ENST00000566510 LLPHQ9BRT6 129 aaKnown RBP16.71■□□□□ 0.27
CDH1-209ENST00000566510 MEGF6O75095 1541 aa16.71■□□□□ 0.27
CDH1-209ENST00000566510 E7EWF7 191 aa16.71■□□□□ 0.26
CDH1-209ENST00000566510 KINO60870 393 aaKnown RBP16.71■□□□□ 0.26
CDH1-209ENST00000566510 CBX1P83916 185 aa16.71■□□□□ 0.26
CDH1-209ENST00000566510 TPD52L1Q16890 204 aaPredicted RBP16.71■□□□□ 0.26
CDH1-209ENST00000566510 GOLPH3LQ9H4A5 285 aa16.71■□□□□ 0.26
CDH1-209ENST00000566510 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
CDH1-209ENST00000566510 IFIT1P09914 478 aaKnown RBP16.7■□□□□ 0.26
CDH1-209ENST00000566510 HSPD1P10809 573 aaKnown RBP16.7■□□□□ 0.26
CDH1-209ENST00000566510 FKBP4Q02790 459 aaKnown RBP eCLIP16.7■□□□□ 0.26
CDH1-209ENST00000566510 CACTINQ8WUQ7 758 aaKnown RBP16.7■□□□□ 0.26
CDH1-209ENST00000566510 ADD1P35611 737 aaKnown RBP16.7■□□□□ 0.26
CDH1-209ENST00000566510 FOXO4P98177 505 aa16.7■□□□□ 0.26
CDH1-209ENST00000566510 CCDC144BQ3MJ40 725 aa16.7■□□□□ 0.26
CDH1-209ENST00000566510 LRRC24Q50LG9 513 aa16.7■□□□□ 0.26
CDH1-209ENST00000566510 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.7■□□□□ 0.26
CDH1-209ENST00000566510 CCDC144CPQ8IYA2 1237 aa16.7■□□□□ 0.26
CDH1-209ENST00000566510 PDCL2Q8N4E4 241 aa16.7■□□□□ 0.26
CDH1-209ENST00000566510 ZNF592Q92610 1267 aa16.7■□□□□ 0.26
CDH1-209ENST00000566510 HELLSQ9NRZ9 838 aa16.7■□□□□ 0.26
CDH1-209ENST00000566510 TAOK2Q9UL54 1235 aa16.7■□□□□ 0.26
CDH1-209ENST00000566510 TNNT1P13805 278 aa16.69■□□□□ 0.26
CDH1-209ENST00000566510 TTLL5Q6EMB2 1281 aa16.69■□□□□ 0.26
CDH1-209ENST00000566510 NAA16Q6N069 864 aaPredicted RBP16.69■□□□□ 0.26
CDH1-209ENST00000566510 TTLL7Q6ZT98 887 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms