RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 A0A1W2PRG0 241 aa15.53■□□□□ 0.08
CX3CL1-204ENST00000565912 USP37Q86T82 979 aa15.53■□□□□ 0.08
CX3CL1-204ENST00000565912 SETDB2Q96T68 719 aa15.53■□□□□ 0.08
CX3CL1-204ENST00000565912 SCAF11Q99590 1463 aaKnown RBP15.53■□□□□ 0.08
CX3CL1-204ENST00000565912 RHPN1Q8TCX5 695 aa15.53■□□□□ 0.08
CX3CL1-204ENST00000565912 ZSCAN16Q9H4T2 348 aaPredicted RBP15.53■□□□□ 0.08
CX3CL1-204ENST00000565912 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
CX3CL1-204ENST00000565912 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
CX3CL1-204ENST00000565912 MRPS9P82933 396 aaKnown RBP15.53■□□□□ 0.08
CX3CL1-204ENST00000565912 RTN1Q16799 776 aa15.53■□□□□ 0.08
CX3CL1-204ENST00000565912 EHBP1Q8NDI1 1231 aa15.53■□□□□ 0.08
CX3CL1-204ENST00000565912 MRVI1Q9Y6F6 885 aa15.53■□□□□ 0.08
CX3CL1-204ENST00000565912 BMP2KLQ5H9B9 411 aa15.52■□□□□ 0.08
CX3CL1-204ENST00000565912 GIMAP6Q6P9H5 292 aa15.52■□□□□ 0.08
CX3CL1-204ENST00000565912 ATP6V1AP38606 617 aa15.52■□□□□ 0.08
CX3CL1-204ENST00000565912 UBASH3AP57075 661 aa15.52■□□□□ 0.08
CX3CL1-204ENST00000565912 PLVAPQ9BX97 442 aa15.52■□□□□ 0.08
CX3CL1-204ENST00000565912 ATP2B3Q16720 1220 aa15.52■□□□□ 0.07
CX3CL1-204ENST00000565912 OGFOD1Q8N543 542 aa15.52■□□□□ 0.07
CX3CL1-204ENST00000565912 SMARCC2Q8TAQ2 1214 aa15.52■□□□□ 0.07
CX3CL1-204ENST00000565912 TCEANC2Q96MN5 208 aa15.52■□□□□ 0.07
CX3CL1-204ENST00000565912 TCHPQ9BT92 498 aa15.52■□□□□ 0.07
CX3CL1-204ENST00000565912 C6orf163Q5TEZ5 329 aa15.52■□□□□ 0.07
CX3CL1-204ENST00000565912 NUP153P49790 1475 aaKnown RBP15.52■□□□□ 0.07
CX3CL1-204ENST00000565912 CEP135Q66GS9 1140 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 CCDC155Q8N6L0 562 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 HSF2BPO75031 334 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 PLCD3Q8N3E9 789 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 CHPF2Q9P2E5 772 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 GJC1P36383 396 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 NAPAP54920 295 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 NAA16Q6N069 864 aaPredicted RBP15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 ZGPATQ8N5A5 531 aaKnown RBP15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 CALM1P0DP23 149 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 CALM2P0DP24 149 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 CALM3P0DP25 149 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 CKAP4Q07065 602 aaKnown RBP15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 TRAF1Q13077 416 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 OTUD6BQ8N6M0 293 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 XAGE3Q8WTP9 111 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 LRRC45Q96CN5 670 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 PAIP2Q9BPZ3 127 aaKnown RBP15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 DPH6Q7L8W6 267 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 TMTC2Q8N394 836 aa15.51■□□□□ 0.07
CX3CL1-204ENST00000565912 ATP2C2O75185 946 aa15.5■□□□□ 0.07
CX3CL1-204ENST00000565912 ECM2O94769 699 aaPredicted RBP15.5■□□□□ 0.07
CX3CL1-204ENST00000565912 PLS1Q14651 629 aa15.5■□□□□ 0.07
CX3CL1-204ENST00000565912 CNNM2Q9H8M5 875 aa15.5■□□□□ 0.07
CX3CL1-204ENST00000565912 ACEP12821 1306 aa15.5■□□□□ 0.07
CX3CL1-204ENST00000565912 ZFYP08048 801 aaPredicted RBP15.5■□□□□ 0.07
CX3CL1-204ENST00000565912 NLRP3Q96P20 1036 aa15.5■□□□□ 0.07
CX3CL1-204ENST00000565912 IQCGQ9H095 443 aaKnown RBP15.5■□□□□ 0.07
CX3CL1-204ENST00000565912 WDR70Q9NW82 654 aa15.5■□□□□ 0.07
CX3CL1-204ENST00000565912 CYLC1P35663 651 aaPredicted RBP15.5■□□□□ 0.07
CX3CL1-204ENST00000565912 ASIC1P78348 528 aa15.5■□□□□ 0.07
CX3CL1-204ENST00000565912 BMP15O95972 392 aa15.5■□□□□ 0.07
CX3CL1-204ENST00000565912 ZSCAN22P10073 491 aaPredicted RBP15.5■□□□□ 0.07
CX3CL1-204ENST00000565912 UGGT2Q9NYU1 1516 aa15.5■□□□□ 0.07
CX3CL1-204ENST00000565912 TNRQ92752 1358 aa15.5■□□□□ 0.07
CX3CL1-204ENST00000565912 HCLS1P14317 486 aaPredicted RBP15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 SREK1Q8WXA9 508 aaKnown RBP15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 COPS6Q7L5N1 327 aa15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 FBF1Q8TES7 1133 aa15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 WWC3Q9ULE0 1092 aa15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 ZCRB1Q8TBF4 217 aaKnown RBP15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 CTAGE1Q96RT6 745 aa15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 VEZTQ9HBM0 779 aa15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 PTGS1P23219 599 aa15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 MARCKSP29966 332 aaPredicted RBP15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 GNAQP50148 359 aa15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 DDX12PQ92771 950 aa15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 FAM212AQ96EL1 285 aa15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 TMX3Q96JJ7 454 aa15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 SYCP2Q9BX26 1530 aa15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 SLC9C2Q5TAH2 1124 aa15.49■□□□□ 0.07
CX3CL1-204ENST00000565912 SLC39A6Q13433 755 aa15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 PPP4R3BQ5MIZ7 849 aa15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 IMPG2Q9BZV3 1241 aa15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 SBNO2Q9Y2G9 1366 aa15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 DISP3Q9P2K9 1392 aa15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 CAVIN2O95810 425 aa15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 ARID5AQ03989 594 aa15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 C6orf50Q9HD87 102 aa15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 RBM26Q5T8P6 1007 aaKnown RBP15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 LMBR1LQ6UX01 489 aa15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 KCNG4Q8TDN1 519 aa15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 NIP7Q9Y221 180 aaKnown RBP eCLIP15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 TMEM110-MUSTN1A8MSY1 372 aa15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 EEF2P13639 858 aaKnown RBP15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 FBLN1P23142 703 aa15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 Q6ZUG5 572 aa15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 DDX23Q9BUQ8 820 aaKnown RBP15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 RBM8AQ9Y5S9 174 aaKnown RBP15.48■□□□□ 0.07
CX3CL1-204ENST00000565912 SELENOOQ9BVL4 669 aa15.47■□□□□ 0.07
CX3CL1-204ENST00000565912 MXRA7P84157 204 aa15.47■□□□□ 0.07
CX3CL1-204ENST00000565912 UVSSAQ2YD98 709 aa15.47■□□□□ 0.07
CX3CL1-204ENST00000565912 MCMDC2Q4G0Z9 681 aa15.47■□□□□ 0.07
CX3CL1-204ENST00000565912 CALCOCO1Q9P1Z2 691 aa15.47■□□□□ 0.07
CX3CL1-204ENST00000565912 CNPY2Q9Y2B0 182 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms