RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 AKAP2Q9Y2D5 859 aa22.98■■□□□ 1.27
COMMD4-213ENST00000565834 GSPT1P15170 499 aaKnown RBP22.97■■□□□ 1.27
COMMD4-213ENST00000565834 CRY2Q49AN0 593 aa22.97■■□□□ 1.27
COMMD4-213ENST00000565834 RPGRQ92834 1020 aaKnown RBP22.97■■□□□ 1.27
COMMD4-213ENST00000565834 TLR7Q9NYK1 1049 aaKnown RBP22.97■■□□□ 1.27
COMMD4-213ENST00000565834 CELF1Q92879 486 aaKnown RBP22.97■■□□□ 1.27
COMMD4-213ENST00000565834 BRIP1Q9BX63 1249 aa22.97■■□□□ 1.27
COMMD4-213ENST00000565834 ECHDC1Q9NTX5 307 aa22.97■■□□□ 1.27
COMMD4-213ENST00000565834 A0A1B0GUL6 1792 aa22.96■■□□□ 1.27
COMMD4-213ENST00000565834 RPS8P62241 208 aaKnown RBP22.96■■□□□ 1.27
COMMD4-213ENST00000565834 BSDC1Q9NW68 430 aaPredicted RBP22.96■■□□□ 1.27
COMMD4-213ENST00000565834 ERC2O15083 957 aa22.95■■□□□ 1.26
COMMD4-213ENST00000565834 VGLL2Q8N8G2 317 aa22.95■■□□□ 1.26
COMMD4-213ENST00000565834 NEUROD6Q96NK8 337 aa22.95■■□□□ 1.26
COMMD4-213ENST00000565834 DBNLQ9UJU6 430 aaKnown RBP22.95■■□□□ 1.26
COMMD4-213ENST00000565834 A0A1B0GUL7 405 aa22.94■■□□□ 1.26
COMMD4-213ENST00000565834 KLRG2A4D1S0 409 aaPredicted RBP22.94■■□□□ 1.26
COMMD4-213ENST00000565834 PDE8BO95263 885 aa22.94■■□□□ 1.26
COMMD4-213ENST00000565834 C8orf34Q49A92 452 aa22.94■■□□□ 1.26
COMMD4-213ENST00000565834 PI4K2BQ8TCG2 481 aa22.94■■□□□ 1.26
COMMD4-213ENST00000565834 GLRX3O76003 335 aaKnown RBP22.93■■□□□ 1.26
COMMD4-213ENST00000565834 TIMM10P62072 90 aa22.93■■□□□ 1.26
COMMD4-213ENST00000565834 ATP2B3Q16720 1220 aa22.93■■□□□ 1.26
COMMD4-213ENST00000565834 RBM17Q96I25 401 aaKnown RBP22.93■■□□□ 1.26
COMMD4-213ENST00000565834 DBNDD2Q9BQY9 259 aa22.93■■□□□ 1.26
COMMD4-213ENST00000565834 AK9Q5TCS8 1911 aa22.93■■□□□ 1.26
COMMD4-213ENST00000565834 PDE6BP35913 854 aa22.93■■□□□ 1.26
COMMD4-213ENST00000565834 GRAPQ13588 217 aa22.93■■□□□ 1.26
COMMD4-213ENST00000565834 GRAPLQ8TC17 118 aaPredicted RBP22.93■■□□□ 1.26
COMMD4-213ENST00000565834 BACH2Q9BYV9 841 aa22.93■■□□□ 1.26
COMMD4-213ENST00000565834 CHRNDQ07001 517 aa22.92■■□□□ 1.26
COMMD4-213ENST00000565834 HELBQ8NG08 1087 aaPredicted RBP22.92■■□□□ 1.26
COMMD4-213ENST00000565834 ARAP2Q8WZ64 1704 aa22.92■■□□□ 1.26
COMMD4-213ENST00000565834 PUM3Q15397 648 aaKnown RBP22.91■■□□□ 1.26
COMMD4-213ENST00000565834 COL11A2P13942 1736 aaPredicted RBP22.91■■□□□ 1.26
COMMD4-213ENST00000565834 SDSP20132 328 aa22.9■■□□□ 1.26
COMMD4-213ENST00000565834 HOXA10P31260 410 aaPredicted RBP22.9■■□□□ 1.26
COMMD4-213ENST00000565834 R3HDM1Q15032 1099 aaKnown RBP22.9■■□□□ 1.26
COMMD4-213ENST00000565834 MINPP1Q9UNW1 487 aa22.9■■□□□ 1.26
COMMD4-213ENST00000565834 TAF5LO75529 589 aa22.89■■□□□ 1.25
COMMD4-213ENST00000565834 LPIN2Q92539 896 aa22.89■■□□□ 1.25
COMMD4-213ENST00000565834 XAGE2Q96GT9 111 aa22.89■■□□□ 1.25
COMMD4-213ENST00000565834 CRAMP1Q96RY5 1269 aa22.89■■□□□ 1.25
COMMD4-213ENST00000565834 TRIM6-TRIM34B2RNG4 842 aa22.88■■□□□ 1.25
COMMD4-213ENST00000565834 ATP5JP18859 108 aa22.88■■□□□ 1.25
COMMD4-213ENST00000565834 GORABQ5T7V8 394 aa22.88■■□□□ 1.25
COMMD4-213ENST00000565834 SRGNP10124 158 aa22.87■■□□□ 1.25
COMMD4-213ENST00000565834 SLC5A1P13866 664 aa22.87■■□□□ 1.25
COMMD4-213ENST00000565834 NPR1P16066 1061 aa22.87■■□□□ 1.25
COMMD4-213ENST00000565834 FGFR2P21802 821 aa22.87■■□□□ 1.25
COMMD4-213ENST00000565834 ADORA1P30542 326 aa22.87■■□□□ 1.25
COMMD4-213ENST00000565834 CDC45O75419 566 aa22.87■■□□□ 1.25
COMMD4-213ENST00000565834 ZBTB7AO95365 584 aa22.87■■□□□ 1.25
COMMD4-213ENST00000565834 ANKRD2Q9GZV1 360 aa22.87■■□□□ 1.25
COMMD4-213ENST00000565834 IFIT1P09914 478 aaKnown RBP22.86■■□□□ 1.25
COMMD4-213ENST00000565834 CCDC158Q5M9N0 1113 aa22.86■■□□□ 1.25
COMMD4-213ENST00000565834 RILPL2Q969X0 211 aa22.86■■□□□ 1.25
COMMD4-213ENST00000565834 MTFR1LQ9H019 292 aa22.86■■□□□ 1.25
COMMD4-213ENST00000565834 BOLA2Q9H3K6 86 aa22.86■■□□□ 1.25
COMMD4-213ENST00000565834 TSHZ2Q9NRE2 1034 aa22.86■■□□□ 1.25
COMMD4-213ENST00000565834 BBOX1O75936 387 aa22.85■■□□□ 1.25
COMMD4-213ENST00000565834 MAP4K4O95819 1239 aaPredicted RBP22.85■■□□□ 1.25
COMMD4-213ENST00000565834 CNTROBQ8N137 903 aa22.85■■□□□ 1.25
COMMD4-213ENST00000565834 C2CD5Q86YS7 1000 aa22.84■■□□□ 1.25
COMMD4-213ENST00000565834 MASTLQ96GX5 879 aa22.84■■□□□ 1.25
COMMD4-213ENST00000565834 C10orf71Q711Q0 1435 aa22.84■■□□□ 1.25
COMMD4-213ENST00000565834 CACNA1SQ13698 1873 aa22.84■■□□□ 1.25
COMMD4-213ENST00000565834 SNAP23O00161 211 aa22.84■■□□□ 1.25
COMMD4-213ENST00000565834 UBE4AQ14139 1066 aa22.84■■□□□ 1.25
COMMD4-213ENST00000565834 TTC39AQ5SRH9 613 aa22.84■■□□□ 1.25
COMMD4-213ENST00000565834 H0YIN7 160 aa22.83■■□□□ 1.24
COMMD4-213ENST00000565834 TBC1D9Q6ZT07 1266 aa22.83■■□□□ 1.24
COMMD4-213ENST00000565834 TMC4Q7Z404 712 aa22.83■■□□□ 1.24
COMMD4-213ENST00000565834 LRRC37AA6NMS7 1700 aa22.83■■□□□ 1.24
COMMD4-213ENST00000565834 POLD1P28340 1107 aa22.82■■□□□ 1.24
COMMD4-213ENST00000565834 ALDH1B1P30837 517 aa22.82■■□□□ 1.24
COMMD4-213ENST00000565834 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.82■■□□□ 1.24
COMMD4-213ENST00000565834 ATF5Q9Y2D1 282 aaPredicted RBP22.82■■□□□ 1.24
COMMD4-213ENST00000565834 PSDA5PKW4 1024 aaPredicted RBP22.81■■□□□ 1.24
COMMD4-213ENST00000565834 PPEF1O14829 653 aaPredicted RBP22.81■■□□□ 1.24
COMMD4-213ENST00000565834 KCNJ4P48050 445 aa22.81■■□□□ 1.24
COMMD4-213ENST00000565834 CASC1Q6TDU7 716 aa22.81■■□□□ 1.24
COMMD4-213ENST00000565834 EVI5LQ96CN4 794 aa22.81■■□□□ 1.24
COMMD4-213ENST00000565834 HAUS7Q99871 368 aa22.81■■□□□ 1.24
COMMD4-213ENST00000565834 KIF13BQ9NQT8 1826 aa22.81■■□□□ 1.24
COMMD4-213ENST00000565834 STYK1Q6J9G0 422 aa22.81■■□□□ 1.24
COMMD4-213ENST00000565834 ANKIB1Q9P2G1 1089 aa22.81■■□□□ 1.24
COMMD4-213ENST00000565834 CCDC102BQ68D86 513 aa22.8■■□□□ 1.24
COMMD4-213ENST00000565834 ZNF622Q969S3 477 aaKnown RBP eCLIP22.8■■□□□ 1.24
COMMD4-213ENST00000565834 DNAJC2Q99543 621 aaKnown RBP22.8■■□□□ 1.24
COMMD4-213ENST00000565834 DLEC1Q9Y238 1755 aa22.8■■□□□ 1.24
COMMD4-213ENST00000565834 XDHP47989 1333 aa22.79■■□□□ 1.24
COMMD4-213ENST00000565834 ZNF512BQ96KM6 892 aaPredicted RBP22.79■■□□□ 1.24
COMMD4-213ENST00000565834 AKAP11Q9UKA4 1901 aa22.79■■□□□ 1.24
COMMD4-213ENST00000565834 UQCRFS1P1P0C7P4 283 aa22.78■■□□□ 1.24
COMMD4-213ENST00000565834 PHKA1P46020 1223 aa22.78■■□□□ 1.24
COMMD4-213ENST00000565834 ZNF804BA4D1E1 1349 aa22.78■■□□□ 1.24
COMMD4-213ENST00000565834 CHRNA5P30532 468 aa22.77■■□□□ 1.24
COMMD4-213ENST00000565834 SLC51AQ86UW1 340 aa22.77■■□□□ 1.24
COMMD4-213ENST00000565834 SP8Q8IXZ3 490 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms