RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 OR8K1Q8NGG5 319 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 BICD1Q96G01 975 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 JPH2Q9BR39 696 aaPredicted RBP7.24□□□□□ -1.25
PTPN9-204ENST00000564970 PAGR1Q9BTK6 254 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 UNC45AQ9H3U1 944 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 NRDE2Q9H7Z3 1164 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 VIPAS39Q9H9C1 493 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 LUC7LQ9NQ29 371 aaKnown RBP7.24□□□□□ -1.25
PTPN9-204ENST00000564970 TUBA8Q9NY65 449 aaPredicted RBP7.24□□□□□ -1.25
PTPN9-204ENST00000564970 IMPACTQ9P2X3 320 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 FAN1Q9Y2M0 1017 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 ATP8A1Q9Y2Q0 1164 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 THRAP3Q9Y2W1 955 aaKnown RBP7.24□□□□□ -1.25
PTPN9-204ENST00000564970 WDR33Q9C0J8 1336 aaKnown RBP7.24□□□□□ -1.25
PTPN9-204ENST00000564970 BCORL1Q5H9F3 1711 aa7.24□□□□□ -1.25
PTPN9-204ENST00000564970 TCOF1Q13428 1488 aaKnown RBP7.24□□□□□ -1.25
PTPN9-204ENST00000564970 EHBP1L1Q8N3D4 1523 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 FAM135AQ9P2D6 1515 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 ADAMTSL3P82987 1691 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 GOLGA6L7A0A1B0GV03 622 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 RBM47A0AV96 593 aaKnown RBP7.23□□□□□ -1.25
PTPN9-204ENST00000564970 SHTN1A0MZ66 631 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 SRRM3A6NNA2 597 aaPredicted RBP7.23□□□□□ -1.25
PTPN9-204ENST00000564970 ENO4A6NNW6 628 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 CEP104O60308 925 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 KIAA0754O94854 1291 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 LUC7L3O95232 432 aaKnown RBP7.23□□□□□ -1.25
PTPN9-204ENST00000564970 FAM200BP0CF97 657 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 MCM3P25205 808 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 CCNHP51946 323 aaPredicted RBP7.23□□□□□ -1.25
PTPN9-204ENST00000564970 SMTNP53814 917 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 LAMB3Q13751 1172 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 WDR43Q15061 677 aaKnown RBP eCLIP7.23□□□□□ -1.25
PTPN9-204ENST00000564970 LRRC23Q53EV4 343 aaPredicted RBP7.23□□□□□ -1.25
PTPN9-204ENST00000564970 SLC30A9Q6PML9 568 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 SEPT14Q6ZU15 432 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 MYLK4Q86YV6 388 aaPredicted RBP7.23□□□□□ -1.25
PTPN9-204ENST00000564970 RNF168Q8IYW5 571 aaPredicted RBP7.23□□□□□ -1.25
PTPN9-204ENST00000564970 NME8Q8N427 588 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 CCHCR1Q8TD31 782 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 ANKRD24Q8TF21 1146 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 P3H4Q92791 437 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 EZH1Q92800 747 aaPredicted RBP7.23□□□□□ -1.25
PTPN9-204ENST00000564970 ZKSCAN4Q969J2 545 aaPredicted RBP7.23□□□□□ -1.25
PTPN9-204ENST00000564970 CCDC47Q96A33 483 aaKnown RBP7.23□□□□□ -1.25
PTPN9-204ENST00000564970 MRFAP1L1Q96HT8 127 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 TMX3Q96JJ7 454 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 ST7Q9NRC1 585 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 RBM27Q9P2N5 1060 aaKnown RBP7.23□□□□□ -1.25
PTPN9-204ENST00000564970 GMEB1Q9Y692 573 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 PIK3C2GO75747 1445 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 CFAP74Q9C0B2 1584 aa7.23□□□□□ -1.25
PTPN9-204ENST00000564970 ZNF644Q9H582 1327 aaPredicted RBP7.23□□□□□ -1.25
PTPN9-204ENST00000564970 ABCA10Q8WWZ4 1543 aa7.22□□□□□ -1.25
PTPN9-204ENST00000564970 USP5P45974 858 aa7.22□□□□□ -1.25
PTPN9-204ENST00000564970 GJA8P48165 433 aa7.22□□□□□ -1.25
PTPN9-204ENST00000564970 TRPC1P48995 793 aa7.22□□□□□ -1.25
PTPN9-204ENST00000564970 APOBRQ0VD83 1088 aa7.22□□□□□ -1.25
PTPN9-204ENST00000564970 NEXNQ0ZGT2 675 aa7.22□□□□□ -1.25
PTPN9-204ENST00000564970 PUS10Q3MIT2 529 aaKnown RBP7.22□□□□□ -1.25
PTPN9-204ENST00000564970 KBTBD12Q3ZCT8 623 aa7.22□□□□□ -1.25
PTPN9-204ENST00000564970 RRP12Q5JTH9 1297 aaKnown RBP7.22□□□□□ -1.25
PTPN9-204ENST00000564970 DNAJC14Q6Y2X3 702 aaPredicted RBP7.22□□□□□ -1.25
PTPN9-204ENST00000564970 ARHGAP22Q7Z5H3 698 aa7.22□□□□□ -1.25
PTPN9-204ENST00000564970 FCHSD1Q86WN1 690 aa7.22□□□□□ -1.25
PTPN9-204ENST00000564970 PLA2G4DQ86XP0 818 aa7.22□□□□□ -1.25
PTPN9-204ENST00000564970 CCAR2Q8N163 923 aaKnown RBP7.22□□□□□ -1.25
PTPN9-204ENST00000564970 XAGE2Q96GT9 111 aa7.22□□□□□ -1.25
PTPN9-204ENST00000564970 NAP1L3Q99457 506 aaPredicted RBP7.22□□□□□ -1.25
PTPN9-204ENST00000564970 MPHOSPH8Q99549 860 aa7.22□□□□□ -1.25
PTPN9-204ENST00000564970 ARPC5LQ9BPX5 153 aa7.22□□□□□ -1.25
PTPN9-204ENST00000564970 FUCA2Q9BTY2 467 aa7.22□□□□□ -1.25
PTPN9-204ENST00000564970 ACTR5Q9H9F9 607 aaPredicted RBP7.22□□□□□ -1.25
PTPN9-204ENST00000564970 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.22□□□□□ -1.25
PTPN9-204ENST00000564970 CORO1CQ9ULV4 474 aaPredicted RBP7.22□□□□□ -1.25
PTPN9-204ENST00000564970 BIVM-ERCC5R4GMW8 1640 aa7.22□□□□□ -1.25
PTPN9-204ENST00000564970 MED1Q15648 1581 aaPredicted RBP7.21□□□□□ -1.25
PTPN9-204ENST00000564970 TMEM232C9JQI7 657 aa7.21□□□□□ -1.26
PTPN9-204ENST00000564970 HAX1O00165 279 aa7.21□□□□□ -1.26
PTPN9-204ENST00000564970 EXOC5O00471 708 aa7.21□□□□□ -1.26
PTPN9-204ENST00000564970 ZEB2O60315 1214 aa7.21□□□□□ -1.26
PTPN9-204ENST00000564970 SHOX2O60902 331 aaPredicted RBP7.21□□□□□ -1.26
PTPN9-204ENST00000564970 CDC45O75419 566 aa7.21□□□□□ -1.26
PTPN9-204ENST00000564970 TADA3O75528 432 aa7.21□□□□□ -1.26
PTPN9-204ENST00000564970 FMNL1O95466 1100 aaPredicted RBP7.21□□□□□ -1.26
PTPN9-204ENST00000564970 OATP04181 439 aa7.21□□□□□ -1.26
PTPN9-204ENST00000564970 CCDC175P0C221 793 aa7.21□□□□□ -1.26
PTPN9-204ENST00000564970 CHGAP10645 457 aaKnown RBP7.21□□□□□ -1.26
PTPN9-204ENST00000564970 IDO1P14902 403 aa7.21□□□□□ -1.26
PTPN9-204ENST00000564970 ZFXP17010 805 aaPredicted RBP7.21□□□□□ -1.26
PTPN9-204ENST00000564970 TPP2P29144 1249 aaPredicted RBP7.21□□□□□ -1.26
PTPN9-204ENST00000564970 HSPA2P54652 639 aa7.21□□□□□ -1.26
PTPN9-204ENST00000564970 SNW1Q13573 536 aaKnown RBP7.21□□□□□ -1.26
PTPN9-204ENST00000564970 POSTNQ15063 836 aa7.21□□□□□ -1.26
PTPN9-204ENST00000564970 KIAA0753Q2KHM9 967 aa7.21□□□□□ -1.26
PTPN9-204ENST00000564970 TBC1D10BQ4KMP7 808 aaPredicted RBP7.21□□□□□ -1.26
PTPN9-204ENST00000564970 CEP85LQ5SZL2 805 aa7.21□□□□□ -1.26
PTPN9-204ENST00000564970 CCDC181Q5TID7 509 aa7.21□□□□□ -1.26
PTPN9-204ENST00000564970 CWF19L1Q69YN2 538 aaKnown RBP7.21□□□□□ -1.26
PTPN9-204ENST00000564970 KCNV1Q6PIU1 500 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms