RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 RBM26Q5T8P6 1007 aaKnown RBP15.07■□□□□ 0
HDGFL3-204ENST00000563790 ASTN2O75129 1339 aaPredicted RBP15.07■□□□□ 0
HDGFL3-204ENST00000563790 SCN9AQ15858 1988 aa15.07■□□□□ 0
HDGFL3-204ENST00000563790 RIC1Q4ADV7 1423 aa15.07■□□□□ 0
HDGFL3-204ENST00000563790 CHD6Q8TD26 2715 aa15.07■□□□□ 0
HDGFL3-204ENST00000563790 STARD3NLO95772 234 aa15.06■□□□□ 0
HDGFL3-204ENST00000563790 MAGEA10P43363 369 aaPredicted RBP15.06■□□□□ 0
HDGFL3-204ENST00000563790 KIF4BQ2VIQ3 1234 aa15.06■□□□□ 0
HDGFL3-204ENST00000563790 SUPT20HQ8NEM7 779 aa15.06■□□□□ 0
HDGFL3-204ENST00000563790 RTFDC1Q9BY42 306 aaPredicted RBP15.06■□□□□ 0
HDGFL3-204ENST00000563790 KIF7Q2M1P5 1343 aa15.06■□□□□ 0
HDGFL3-204ENST00000563790 XIRP2A4UGR9 3374 aa15.06■□□□□ 0
HDGFL3-204ENST00000563790 ANKRD11Q6UB99 2663 aaPredicted RBP15.06■□□□□ 0
HDGFL3-204ENST00000563790 FYB1O15117 783 aa15.05■□□□□ -0
HDGFL3-204ENST00000563790 HOXA10P31260 410 aaPredicted RBP15.05■□□□□ -0
HDGFL3-204ENST00000563790 IL6STP40189 918 aaPredicted RBP15.05■□□□□ -0
HDGFL3-204ENST00000563790 KIAA2012Q0VF49 1180 aa15.05■□□□□ -0
HDGFL3-204ENST00000563790 PLEKHO1Q53GL0 409 aaPredicted RBP15.05■□□□□ -0
HDGFL3-204ENST00000563790 ADAMTS19Q8TE59 1207 aa15.05■□□□□ -0
HDGFL3-204ENST00000563790 UBE2OQ9C0C9 1292 aaKnown RBP15.05■□□□□ -0
HDGFL3-204ENST00000563790 EMILIN1Q9Y6C2 1016 aa15.05■□□□□ -0
HDGFL3-204ENST00000563790 PSME4Q14997 1843 aa15.04■□□□□ -0
HDGFL3-204ENST00000563790 GGNBP2Q9H3C7 697 aa15.04■□□□□ -0
HDGFL3-204ENST00000563790 RPS12P25398 132 aaKnown RBP15.03■□□□□ -0
HDGFL3-204ENST00000563790 SLC39A6Q13433 755 aa15.03■□□□□ -0
HDGFL3-204ENST00000563790 CLEC4GQ6UXB4 293 aa15.03■□□□□ -0
HDGFL3-204ENST00000563790 UHRF1Q96T88 793 aaPredicted RBP15.03■□□□□ -0
HDGFL3-204ENST00000563790 ZNF330Q9Y3S2 320 aaPredicted RBP15.03■□□□□ -0
HDGFL3-204ENST00000563790 PTPN12Q05209 780 aaKnown RBP15.02■□□□□ -0
HDGFL3-204ENST00000563790 TTLL12Q14166 644 aaPredicted RBP15.02■□□□□ -0
HDGFL3-204ENST00000563790 ANGEL2Q5VTE6 544 aaKnown RBP15.02■□□□□ -0
HDGFL3-204ENST00000563790 MYLIPQ8WY64 445 aa15.02■□□□□ -0
HDGFL3-204ENST00000563790 ZMYND8Q9ULU4 1186 aaPredicted RBP15.02■□□□□ -0
HDGFL3-204ENST00000563790 TPRP12270 2363 aaKnown RBP15.01□□□□□ -0.01
HDGFL3-204ENST00000563790 PSMD14O00487 310 aa15.01□□□□□ -0.01
HDGFL3-204ENST00000563790 AMOTQ4VCS5 1084 aa15.01□□□□□ -0.01
HDGFL3-204ENST00000563790 C1orf141Q5JVX7 400 aa15.01□□□□□ -0.01
HDGFL3-204ENST00000563790 PPARGC1BQ86YN6 1023 aaKnown RBP15.01□□□□□ -0.01
HDGFL3-204ENST00000563790 SEMA6BQ9H3T3 888 aa15.01□□□□□ -0.01
HDGFL3-204ENST00000563790 RNF216Q9NWF9 866 aaPredicted RBP15.01□□□□□ -0.01
HDGFL3-204ENST00000563790 CCL5P13501 91 aa15□□□□□ -0.01
HDGFL3-204ENST00000563790 FOSL2P15408 326 aa15□□□□□ -0.01
HDGFL3-204ENST00000563790 OTUD7BQ6GQQ9 843 aa15□□□□□ -0.01
HDGFL3-204ENST00000563790 RPGRQ92834 1020 aaKnown RBP15□□□□□ -0.01
HDGFL3-204ENST00000563790 CRAMP1Q96RY5 1269 aa15□□□□□ -0.01
HDGFL3-204ENST00000563790 SLC52A2Q9HAB3 445 aa15□□□□□ -0.01
HDGFL3-204ENST00000563790 NUP98P52948 1817 aa15□□□□□ -0.01
HDGFL3-204ENST00000563790 UNC79Q9P2D8 2635 aa14.99□□□□□ -0.01
HDGFL3-204ENST00000563790 DCHS1Q96JQ0 3298 aa14.99□□□□□ -0.01
HDGFL3-204ENST00000563790 TCERG1O14776 1098 aaKnown RBP14.99□□□□□ -0.01
HDGFL3-204ENST00000563790 ZBTB48P10074 688 aaPredicted RBP14.99□□□□□ -0.01
HDGFL3-204ENST00000563790 C7orf61Q8IZ16 206 aa14.99□□□□□ -0.01
HDGFL3-204ENST00000563790 U2AF1L4Q8WU68 220 aaKnown RBP14.99□□□□□ -0.01
HDGFL3-204ENST00000563790 PUS7Q96PZ0 661 aaKnown RBP14.99□□□□□ -0.01
HDGFL3-204ENST00000563790 ECM2O94769 699 aaPredicted RBP14.98□□□□□ -0.01
HDGFL3-204ENST00000563790 PRMT2P55345 433 aa14.98□□□□□ -0.01
HDGFL3-204ENST00000563790 LDLRAD1Q5T700 205 aa14.98□□□□□ -0.01
HDGFL3-204ENST00000563790 DZIP3Q86Y13 1208 aaKnown RBP14.98□□□□□ -0.01
HDGFL3-204ENST00000563790 USP38Q8NB14 1042 aa14.98□□□□□ -0.01
HDGFL3-204ENST00000563790 ATXN2LQ8WWM7 1075 aaKnown RBP14.98□□□□□ -0.01
HDGFL3-204ENST00000563790 RNF208Q9H0X6 261 aa14.98□□□□□ -0.01
HDGFL3-204ENST00000563790 ABCC12Q96J65 1359 aa14.98□□□□□ -0.01
HDGFL3-204ENST00000563790 MGAMO43451 1857 aa14.97□□□□□ -0.01
HDGFL3-204ENST00000563790 TRANK1O15050 2925 aa14.97□□□□□ -0.01
HDGFL3-204ENST00000563790 FAM205AQ6ZU69 1335 aa14.97□□□□□ -0.01
HDGFL3-204ENST00000563790 SETXQ7Z333 2677 aaKnown RBP14.97□□□□□ -0.01
HDGFL3-204ENST00000563790 GNRH1P01148 92 aa14.97□□□□□ -0.01
HDGFL3-204ENST00000563790 CAPN2P17655 700 aa14.97□□□□□ -0.01
HDGFL3-204ENST00000563790 COL26A1Q96A83 441 aa14.97□□□□□ -0.01
HDGFL3-204ENST00000563790 TMX4Q9H1E5 349 aaPredicted RBP14.97□□□□□ -0.01
HDGFL3-204ENST00000563790 ATP6V0A2Q9Y487 856 aa14.97□□□□□ -0.01
HDGFL3-204ENST00000563790 CFAP47Q6ZTR5 3102 aa14.96□□□□□ -0.01
HDGFL3-204ENST00000563790 SCARF1Q14162 830 aa14.96□□□□□ -0.01
HDGFL3-204ENST00000563790 NPM2Q86SE8 214 aaKnown RBP14.96□□□□□ -0.01
HDGFL3-204ENST00000563790 ZNF496Q96IT1 587 aaPredicted RBP14.96□□□□□ -0.01
HDGFL3-204ENST00000563790 ASB2Q96Q27 587 aa14.96□□□□□ -0.01
HDGFL3-204ENST00000563790 DUOX1Q9NRD9 1551 aa14.96□□□□□ -0.01
HDGFL3-204ENST00000563790 ZNF652Q9Y2D9 606 aa14.96□□□□□ -0.01
HDGFL3-204ENST00000563790 PPM1GO15355 546 aaPredicted RBP14.95□□□□□ -0.02
HDGFL3-204ENST00000563790 SGPL1O95470 568 aa14.95□□□□□ -0.02
HDGFL3-204ENST00000563790 SYN1P17600 705 aa14.95□□□□□ -0.02
HDGFL3-204ENST00000563790 NF2P35240 595 aa14.95□□□□□ -0.02
HDGFL3-204ENST00000563790 TMEM31Q5JXX7 168 aa14.95□□□□□ -0.02
HDGFL3-204ENST00000563790 PRAMEF18Q5VWM3 479 aa14.95□□□□□ -0.02
HDGFL3-204ENST00000563790 NUTM1Q86Y26 1132 aa14.95□□□□□ -0.02
HDGFL3-204ENST00000563790 NIP7Q9Y221 180 aaKnown RBP eCLIP14.95□□□□□ -0.02
HDGFL3-204ENST00000563790 PTPRZ1P23471 2315 aaPredicted RBP14.95□□□□□ -0.02
HDGFL3-204ENST00000563790 LAMB2P55268 1798 aa14.94□□□□□ -0.02
HDGFL3-204ENST00000563790 DPP8Q6V1X1 898 aaPredicted RBP14.94□□□□□ -0.02
HDGFL3-204ENST00000563790 ARMC9Q7Z3E5 817 aa14.94□□□□□ -0.02
HDGFL3-204ENST00000563790 RBM17Q96I25 401 aaKnown RBP14.94□□□□□ -0.02
HDGFL3-204ENST00000563790 LRRC37AA6NMS7 1700 aa14.94□□□□□ -0.02
HDGFL3-204ENST00000563790 ANKRD36CQ5JPF3 1778 aa14.93□□□□□ -0.02
HDGFL3-204ENST00000563790 FAM177BA6PVY3 158 aa14.93□□□□□ -0.02
HDGFL3-204ENST00000563790 RGL2O15211 777 aa14.93□□□□□ -0.02
HDGFL3-204ENST00000563790 GTF2E1P29083 439 aaPredicted RBP14.93□□□□□ -0.02
HDGFL3-204ENST00000563790 WNK4Q96J92 1243 aa14.93□□□□□ -0.02
HDGFL3-204ENST00000563790 PTPN18Q99952 460 aa14.93□□□□□ -0.02
HDGFL3-204ENST00000563790 CHD9Q3L8U1 2897 aa14.93□□□□□ -0.02
HDGFL3-204ENST00000563790 ZNF318Q5VUA4 2279 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms