RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 IFIT2P09913 472 aaKnown RBP12.49□□□□□ -0.41
SMG1-208ENST00000563448 GSPT1P15170 499 aaKnown RBP12.49□□□□□ -0.41
SMG1-208ENST00000563448 CRY2Q49AN0 593 aa12.49□□□□□ -0.41
SMG1-208ENST00000563448 ANKRD18AQ8IVF6 992 aa12.49□□□□□ -0.41
SMG1-208ENST00000563448 SLC16A10Q8TF71 515 aa12.49□□□□□ -0.41
SMG1-208ENST00000563448 MPHOSPH8Q99549 860 aa12.49□□□□□ -0.41
SMG1-208ENST00000563448 KLRG2A4D1S0 409 aaPredicted RBP12.48□□□□□ -0.41
SMG1-208ENST00000563448 BMP2KLQ5H9B9 411 aa12.48□□□□□ -0.41
SMG1-208ENST00000563448 METTL24Q5JXM2 366 aa12.48□□□□□ -0.41
SMG1-208ENST00000563448 VGLL2Q8N8G2 317 aa12.48□□□□□ -0.41
SMG1-208ENST00000563448 MYH13Q9UKX3 1938 aa12.48□□□□□ -0.41
SMG1-208ENST00000563448 AOX1Q06278 1338 aa12.47□□□□□ -0.41
SMG1-208ENST00000563448 TTC41PQ6P2S7 1318 aa12.47□□□□□ -0.41
SMG1-208ENST00000563448 MROH5Q6ZUA9 1318 aa12.47□□□□□ -0.41
SMG1-208ENST00000563448 TIMM10P62072 90 aa12.47□□□□□ -0.41
SMG1-208ENST00000563448 DDX46Q7L014 1031 aaKnown RBP12.47□□□□□ -0.41
SMG1-208ENST00000563448 PI4K2BQ8TCG2 481 aa12.47□□□□□ -0.41
SMG1-208ENST00000563448 BRIP1Q9BX63 1249 aa12.47□□□□□ -0.41
SMG1-208ENST00000563448 MYO5AQ9Y4I1 1855 aaKnown RBP12.47□□□□□ -0.41
SMG1-208ENST00000563448 RPS8P62241 208 aaKnown RBP12.47□□□□□ -0.41
SMG1-208ENST00000563448 C8orf34Q49A92 452 aa12.47□□□□□ -0.41
SMG1-208ENST00000563448 BSDC1Q9NW68 430 aaPredicted RBP12.47□□□□□ -0.41
SMG1-208ENST00000563448 DBNLQ9UJU6 430 aaKnown RBP12.47□□□□□ -0.41
SMG1-208ENST00000563448 MYH7P12883 1935 aa12.46□□□□□ -0.41
SMG1-208ENST00000563448 A0A1B0GUL7 405 aa12.46□□□□□ -0.41
SMG1-208ENST00000563448 PDE8BO95263 885 aa12.46□□□□□ -0.41
SMG1-208ENST00000563448 HELBQ8NG08 1087 aaPredicted RBP12.46□□□□□ -0.41
SMG1-208ENST00000563448 NEUROD6Q96NK8 337 aa12.46□□□□□ -0.41
SMG1-208ENST00000563448 DBNDD2Q9BQY9 259 aa12.46□□□□□ -0.41
SMG1-208ENST00000563448 AKAP2Q9Y2D5 859 aa12.46□□□□□ -0.41
SMG1-208ENST00000563448 CHRNDQ07001 517 aa12.45□□□□□ -0.42
SMG1-208ENST00000563448 GRAPQ13588 217 aa12.45□□□□□ -0.42
SMG1-208ENST00000563448 R3HDM1Q15032 1099 aaKnown RBP12.45□□□□□ -0.42
SMG1-208ENST00000563448 GRAPLQ8TC17 118 aaPredicted RBP12.45□□□□□ -0.42
SMG1-208ENST00000563448 RPGRQ92834 1020 aaKnown RBP12.45□□□□□ -0.42
SMG1-208ENST00000563448 ECHDC1Q9NTX5 307 aa12.45□□□□□ -0.42
SMG1-208ENST00000563448 KIAA1551Q9HCM1 1747 aa12.45□□□□□ -0.42
SMG1-208ENST00000563448 SLX4Q8IY92 1834 aa12.45□□□□□ -0.42
SMG1-208ENST00000563448 TAF5LO75529 589 aa12.45□□□□□ -0.42
SMG1-208ENST00000563448 HOXA10P31260 410 aaPredicted RBP12.45□□□□□ -0.42
SMG1-208ENST00000563448 ATP2B3Q16720 1220 aa12.45□□□□□ -0.42
SMG1-208ENST00000563448 RBM17Q96I25 401 aaKnown RBP12.45□□□□□ -0.42
SMG1-208ENST00000563448 BACH2Q9BYV9 841 aa12.45□□□□□ -0.42
SMG1-208ENST00000563448 MINPP1Q9UNW1 487 aa12.45□□□□□ -0.42
SMG1-208ENST00000563448 LTBP1Q14766 1721 aa12.44□□□□□ -0.42
SMG1-208ENST00000563448 SDSP20132 328 aa12.44□□□□□ -0.42
SMG1-208ENST00000563448 FGFR2P21802 821 aa12.44□□□□□ -0.42
SMG1-208ENST00000563448 PDE6BP35913 854 aa12.44□□□□□ -0.42
SMG1-208ENST00000563448 GPATCH3Q96I76 525 aa12.44□□□□□ -0.42
SMG1-208ENST00000563448 ZBTB7AO95365 584 aa12.44□□□□□ -0.42
SMG1-208ENST00000563448 SRGNP10124 158 aa12.44□□□□□ -0.42
SMG1-208ENST00000563448 ADORA1P30542 326 aa12.44□□□□□ -0.42
SMG1-208ENST00000563448 XAGE2Q96GT9 111 aa12.44□□□□□ -0.42
SMG1-208ENST00000563448 CRAMP1Q96RY5 1269 aa12.44□□□□□ -0.42
SMG1-208ENST00000563448 SNAP23O00161 211 aa12.43□□□□□ -0.42
SMG1-208ENST00000563448 ERC2O15083 957 aa12.43□□□□□ -0.42
SMG1-208ENST00000563448 GLRX3O76003 335 aaKnown RBP12.43□□□□□ -0.42
SMG1-208ENST00000563448 MAP4K4O95819 1239 aaPredicted RBP12.43□□□□□ -0.42
SMG1-208ENST00000563448 PUM3Q15397 648 aaKnown RBP12.43□□□□□ -0.42
SMG1-208ENST00000563448 SLC51AQ86UW1 340 aa12.43□□□□□ -0.42
SMG1-208ENST00000563448 C10orf71Q711Q0 1435 aa12.43□□□□□ -0.42
SMG1-208ENST00000563448 BRCA1P38398 1863 aaKnown RBP12.42□□□□□ -0.42
SMG1-208ENST00000563448 NPR1P16066 1061 aa12.42□□□□□ -0.42
SMG1-208ENST00000563448 ATP5JP18859 108 aa12.42□□□□□ -0.42
SMG1-208ENST00000563448 LPIN2Q92539 896 aa12.42□□□□□ -0.42
SMG1-208ENST00000563448 PSDA5PKW4 1024 aaPredicted RBP12.42□□□□□ -0.42
SMG1-208ENST00000563448 MTFR1LQ9H019 292 aa12.42□□□□□ -0.42
SMG1-208ENST00000563448 BOLA2Q9H3K6 86 aa12.42□□□□□ -0.42
SMG1-208ENST00000563448 ATF5Q9Y2D1 282 aaPredicted RBP12.42□□□□□ -0.42
SMG1-208ENST00000563448 DOCK2Q92608 1830 aa12.41□□□□□ -0.42
SMG1-208ENST00000563448 WTIPA6NIX2 430 aaPredicted RBP12.41□□□□□ -0.42
SMG1-208ENST00000563448 TRIM6-TRIM34B2RNG4 842 aa12.41□□□□□ -0.42
SMG1-208ENST00000563448 C2CD5Q86YS7 1000 aa12.41□□□□□ -0.42
SMG1-208ENST00000563448 MASTLQ96GX5 879 aa12.41□□□□□ -0.42
SMG1-208ENST00000563448 TSHZ2Q9NRE2 1034 aa12.41□□□□□ -0.42
SMG1-208ENST00000563448 BBOX1O75936 387 aa12.4□□□□□ -0.42
SMG1-208ENST00000563448 SLC5A1P13866 664 aa12.4□□□□□ -0.42
SMG1-208ENST00000563448 RILPL2Q969X0 211 aa12.4□□□□□ -0.42
SMG1-208ENST00000563448 ANKRD2Q9GZV1 360 aa12.4□□□□□ -0.42
SMG1-208ENST00000563448 UBE4AQ14139 1066 aa12.4□□□□□ -0.42
SMG1-208ENST00000563448 CCDC158Q5M9N0 1113 aa12.4□□□□□ -0.42
SMG1-208ENST00000563448 GORABQ5T7V8 394 aa12.4□□□□□ -0.42
SMG1-208ENST00000563448 H0YIN7 160 aa12.39□□□□□ -0.43
SMG1-208ENST00000563448 CDC45O75419 566 aa12.39□□□□□ -0.43
SMG1-208ENST00000563448 SEC24BO95487 1268 aa12.39□□□□□ -0.43
SMG1-208ENST00000563448 IFIT1P09914 478 aaKnown RBP12.39□□□□□ -0.43
SMG1-208ENST00000563448 CHRNA5P30532 468 aa12.39□□□□□ -0.43
SMG1-208ENST00000563448 ALDH1B1P30837 517 aa12.39□□□□□ -0.43
SMG1-208ENST00000563448 TTC39AQ5SRH9 613 aa12.39□□□□□ -0.43
SMG1-208ENST00000563448 STYK1Q6J9G0 422 aa12.39□□□□□ -0.43
SMG1-208ENST00000563448 TBC1D9Q6ZT07 1266 aa12.39□□□□□ -0.43
SMG1-208ENST00000563448 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.39□□□□□ -0.43
SMG1-208ENST00000563448 NDUFB9Q9Y6M9 179 aa12.39□□□□□ -0.43
SMG1-208ENST00000563448 PPEF1O14829 653 aaPredicted RBP12.38□□□□□ -0.43
SMG1-208ENST00000563448 GPSM2P81274 684 aa12.38□□□□□ -0.43
SMG1-208ENST00000563448 CNTROBQ8N137 903 aa12.38□□□□□ -0.43
SMG1-208ENST00000563448 ZNF622Q969S3 477 aaKnown RBP eCLIP12.38□□□□□ -0.438e-9■□□□□ 9.9
SMG1-208ENST00000563448 HAUS7Q99871 368 aa12.38□□□□□ -0.43
SMG1-208ENST00000563448 SGIP1Q9BQI5 828 aa12.38□□□□□ -0.43
SMG1-208ENST00000563448 CHD4Q14839 1912 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms