RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 PRKRIP1Q9H875 184 aaPredicted RBP13.25□□□□□ -0.29
SNX29-202ENST00000563308 ABCC12Q96J65 1359 aa13.24□□□□□ -0.29
SNX29-202ENST00000563308 UBN2Q6ZU65 1347 aa13.24□□□□□ -0.29
SNX29-202ENST00000563308 POLR2AP24928 1970 aaKnown RBP13.24□□□□□ -0.29
SNX29-202ENST00000563308 CHL1O00533 1208 aa13.24□□□□□ -0.29
SNX29-202ENST00000563308 PPEF1O14829 653 aaPredicted RBP13.24□□□□□ -0.29
SNX29-202ENST00000563308 MYCP01106 439 aaPredicted RBP13.24□□□□□ -0.29
SNX29-202ENST00000563308 ZNF34Q8IZ26 560 aa13.24□□□□□ -0.29
SNX29-202ENST00000563308 RUNDC1Q96C34 613 aa13.24□□□□□ -0.29
SNX29-202ENST00000563308 ZNF333Q96JL9 665 aa13.24□□□□□ -0.29
SNX29-202ENST00000563308 PRO3102Q9H379 93 aa13.24□□□□□ -0.29
SNX29-202ENST00000563308 ZBTB3Q9H5J0 574 aa13.24□□□□□ -0.29
SNX29-202ENST00000563308 LMOD3Q0VAK6 560 aa13.23□□□□□ -0.29
SNX29-202ENST00000563308 NEUROD2Q15784 382 aa13.23□□□□□ -0.29
SNX29-202ENST00000563308 CRY2Q49AN0 593 aa13.23□□□□□ -0.29
SNX29-202ENST00000563308 KIF6Q6ZMV9 814 aa13.23□□□□□ -0.29
SNX29-202ENST00000563308 Q7L0L9 218 aa13.23□□□□□ -0.29
SNX29-202ENST00000563308 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
SNX29-202ENST00000563308 DPF2Q92785 391 aa13.23□□□□□ -0.29
SNX29-202ENST00000563308 RBM17Q96I25 401 aaKnown RBP13.23□□□□□ -0.29
SNX29-202ENST00000563308 ANXA1P04083 346 aa13.22□□□□□ -0.29
SNX29-202ENST00000563308 EIF2S2P20042 333 aaKnown RBP13.22□□□□□ -0.29
SNX29-202ENST00000563308 GPTP24298 496 aa13.22□□□□□ -0.29
SNX29-202ENST00000563308 HOXD11P31277 338 aaPredicted RBP13.22□□□□□ -0.29
SNX29-202ENST00000563308 KRT24Q2M2I5 525 aa13.22□□□□□ -0.29
SNX29-202ENST00000563308 SUSD4Q5VX71 490 aa13.22□□□□□ -0.29
SNX29-202ENST00000563308 GIGYF2Q6Y7W6 1299 aaKnown RBP13.22□□□□□ -0.29
SNX29-202ENST00000563308 CD99L2Q8TCZ2 262 aa13.22□□□□□ -0.29
SNX29-202ENST00000563308 MTMR10Q9NXD2 777 aa13.22□□□□□ -0.29
SNX29-202ENST00000563308 SNED1Q8TER0 1413 aa13.22□□□□□ -0.29
SNX29-202ENST00000563308 IBTKQ9P2D0 1353 aaPredicted RBP13.21□□□□□ -0.29
SNX29-202ENST00000563308 NUP98P52948 1817 aa13.21□□□□□ -0.29
SNX29-202ENST00000563308 WTIPA6NIX2 430 aaPredicted RBP13.21□□□□□ -0.29
SNX29-202ENST00000563308 NTSR2O95665 410 aa13.21□□□□□ -0.29
SNX29-202ENST00000563308 WDR43Q15061 677 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNX29-202ENST00000563308 NYXQ9GZU5 481 aa13.21□□□□□ -0.29
SNX29-202ENST00000563308 R3HDMLQ9H3Y0 253 aa13.21□□□□□ -0.29
SNX29-202ENST00000563308 GGA3Q9NZ52 723 aa13.21□□□□□ -0.29
SNX29-202ENST00000563308 RIC1Q4ADV7 1423 aa13.21□□□□□ -0.3
SNX29-202ENST00000563308 SHTN1A0MZ66 631 aa13.2□□□□□ -0.3
SNX29-202ENST00000563308 UBE2Q2LH0YL09 131 aa13.2□□□□□ -0.3
SNX29-202ENST00000563308 HOXA10P31260 410 aaPredicted RBP13.2□□□□□ -0.3
SNX29-202ENST00000563308 NF2P35240 595 aa13.2□□□□□ -0.3
SNX29-202ENST00000563308 INHBEP58166 350 aa13.2□□□□□ -0.3
SNX29-202ENST00000563308 C3orf67Q6ZVT6 689 aa13.2□□□□□ -0.3
SNX29-202ENST00000563308 ZBTB12Q9Y330 459 aaPredicted RBP13.2□□□□□ -0.3
SNX29-202ENST00000563308 TMEM265A0A087WTH1 108 aa13.19□□□□□ -0.3
SNX29-202ENST00000563308 ZBTB7BO15156 539 aaPredicted RBP13.19□□□□□ -0.3
SNX29-202ENST00000563308 KIF4BQ2VIQ3 1234 aa13.19□□□□□ -0.3
SNX29-202ENST00000563308 OTUD7BQ6GQQ9 843 aa13.19□□□□□ -0.3
SNX29-202ENST00000563308 DPP8Q6V1X1 898 aaPredicted RBP13.19□□□□□ -0.3
SNX29-202ENST00000563308 SLC51AQ86UW1 340 aa13.19□□□□□ -0.3
SNX29-202ENST00000563308 NKX2-3Q8TAU0 364 aa13.19□□□□□ -0.3
SNX29-202ENST00000563308 NECTIN2Q92692 538 aa13.19□□□□□ -0.3
SNX29-202ENST00000563308 RAPGEFL1Q9UHV5 662 aa13.19□□□□□ -0.3
SNX29-202ENST00000563308 RPTORQ8N122 1335 aa13.18□□□□□ -0.3
SNX29-202ENST00000563308 ZNF853P0CG23 659 aa13.18□□□□□ -0.3
SNX29-202ENST00000563308 COPS6Q7L5N1 327 aa13.18□□□□□ -0.3
SNX29-202ENST00000563308 XAGE3Q8WTP9 111 aa13.18□□□□□ -0.3
SNX29-202ENST00000563308 EVI5O60447 810 aa13.17□□□□□ -0.3
SNX29-202ENST00000563308 RPS12P25398 132 aaKnown RBP13.17□□□□□ -0.3
SNX29-202ENST00000563308 SP3Q02447 781 aa13.17□□□□□ -0.3
SNX29-202ENST00000563308 KIAA2012Q0VF49 1180 aa13.17□□□□□ -0.3
SNX29-202ENST00000563308 PARP10Q53GL7 1025 aa13.17□□□□□ -0.3
SNX29-202ENST00000563308 SLC10A5Q5PT55 438 aa13.17□□□□□ -0.3
SNX29-202ENST00000563308 CRAMP1Q96RY5 1269 aa13.17□□□□□ -0.3
SNX29-202ENST00000563308 STAP2Q9UGK3 403 aa13.17□□□□□ -0.3
SNX29-202ENST00000563308 LAS1LQ9Y4W2 734 aaKnown RBP13.17□□□□□ -0.3
SNX29-202ENST00000563308 ZNF609O15014 1411 aa13.16□□□□□ -0.3
SNX29-202ENST00000563308 MANSC4A6NHS7 340 aaPredicted RBP13.16□□□□□ -0.3
SNX29-202ENST00000563308 CCDC184Q52MB2 194 aa13.16□□□□□ -0.3
SNX29-202ENST00000563308 CHPF2Q9P2E5 772 aa13.16□□□□□ -0.3
SNX29-202ENST00000563308 APAF1O14727 1248 aa13.15□□□□□ -0.3
SNX29-202ENST00000563308 HOXB7P09629 217 aa13.15□□□□□ -0.3
SNX29-202ENST00000563308 AIMP1Q12904 312 aaKnown RBP13.15□□□□□ -0.3
SNX29-202ENST00000563308 MOB2Q70IA6 237 aa13.15□□□□□ -0.3
SNX29-202ENST00000563308 PPP1R42Q7Z4L9 355 aa13.15□□□□□ -0.3
SNX29-202ENST00000563308 NLRP10Q86W26 655 aa13.15□□□□□ -0.3
SNX29-202ENST00000563308 SNX27Q96L92 541 aa13.15□□□□□ -0.3
SNX29-202ENST00000563308 UTP14AQ9BVJ6 771 aaKnown RBP13.15□□□□□ -0.3
SNX29-202ENST00000563308 MBIPQ9NS73 344 aa13.15□□□□□ -0.3
SNX29-202ENST00000563308 UNC80Q8N2C7 3258 aa13.15□□□□□ -0.3
SNX29-202ENST00000563308 HDGFL1Q5TGJ6 251 aa13.14□□□□□ -0.31
SNX29-202ENST00000563308 ANGEL2Q5VTE6 544 aaKnown RBP13.14□□□□□ -0.31
SNX29-202ENST00000563308 ARMC9Q7Z3E5 817 aa13.14□□□□□ -0.31
SNX29-202ENST00000563308 IFNL1Q8IU54 200 aa13.14□□□□□ -0.31
SNX29-202ENST00000563308 ATP6V0A2Q9Y487 856 aa13.14□□□□□ -0.31
SNX29-202ENST00000563308 PTCH2Q9Y6C5 1203 aa13.14□□□□□ -0.31
SNX29-202ENST00000563308 TNFRSF10AO00220 468 aa13.13□□□□□ -0.31
SNX29-202ENST00000563308 PSMD14O00487 310 aa13.13□□□□□ -0.31
SNX29-202ENST00000563308 EGFRP00533 1210 aa13.13□□□□□ -0.31
SNX29-202ENST00000563308 DUSP27Q5VZP5 1158 aa13.13□□□□□ -0.31
SNX29-202ENST00000563308 RTFDC1Q9BY42 306 aaPredicted RBP13.13□□□□□ -0.31
SNX29-202ENST00000563308 RANBP2P49792 3224 aaKnown RBP13.13□□□□□ -0.31
SNX29-202ENST00000563308 HCLS1P14317 486 aaPredicted RBP13.12□□□□□ -0.31
SNX29-202ENST00000563308 HSP90AB3PQ58FF7 597 aa13.12□□□□□ -0.31
SNX29-202ENST00000563308 NLRP3Q96P20 1036 aa13.12□□□□□ -0.31
SNX29-202ENST00000563308 IFT57Q9NWB7 429 aa13.12□□□□□ -0.31
SNX29-202ENST00000563308 LRIT3Q3SXY7 679 aa13.11□□□□□ -0.31
SNX29-202ENST00000563308 SPRYD7Q5W111 196 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms