RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 KIFC2Q96AC6 838 aa10.29□□□□□ -0.76
KARS-203ENST00000562875 C2orf49Q9BVC5 232 aaPredicted RBP10.29□□□□□ -0.76
KARS-203ENST00000562875 NKTRP30414 1462 aaKnown RBP10.29□□□□□ -0.76
KARS-203ENST00000562875 SBNO2Q9Y2G9 1366 aa10.28□□□□□ -0.76
KARS-203ENST00000562875 SOBPA7XYQ1 873 aa10.28□□□□□ -0.76
KARS-203ENST00000562875 KIF3BO15066 747 aa10.28□□□□□ -0.76
KARS-203ENST00000562875 SCNN1AP37088 669 aa10.28□□□□□ -0.76
KARS-203ENST00000562875 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.28□□□□□ -0.76
KARS-203ENST00000562875 SH3PXD2AQ5TCZ1 1133 aa10.28□□□□□ -0.76
KARS-203ENST00000562875 STAG2Q8N3U4 1231 aa10.28□□□□□ -0.76
KARS-203ENST00000562875 KCTD17Q8N5Z5 321 aa10.28□□□□□ -0.76
KARS-203ENST00000562875 BCL11AQ9H165 835 aa10.28□□□□□ -0.76
KARS-203ENST00000562875 CFAP65Q6ZU64 1925 aaKnown RBP10.28□□□□□ -0.76
KARS-203ENST00000562875 ANKRD26Q9UPS8 1709 aa10.27□□□□□ -0.76
KARS-203ENST00000562875 SENP3-EIF4A1A0A087X0R7 540 aa10.27□□□□□ -0.77
KARS-203ENST00000562875 EML1O00423 815 aa10.27□□□□□ -0.77
KARS-203ENST00000562875 NPM2Q86SE8 214 aaKnown RBP10.27□□□□□ -0.77
KARS-203ENST00000562875 CRBNQ96SW2 442 aa10.27□□□□□ -0.77
KARS-203ENST00000562875 ADAMTS8Q9UP79 889 aa10.27□□□□□ -0.77
KARS-203ENST00000562875 ERVK-7P63135 1459 aa10.27□□□□□ -0.77
KARS-203ENST00000562875 NRXN1Q9ULB1 1477 aa10.26□□□□□ -0.77
KARS-203ENST00000562875 KCNA1Q09470 495 aa10.26□□□□□ -0.77
KARS-203ENST00000562875 TRIM47Q96LD4 638 aa10.26□□□□□ -0.77
KARS-203ENST00000562875 BACH2Q9BYV9 841 aa10.26□□□□□ -0.77
KARS-203ENST00000562875 USP35Q9P2H5 1018 aa10.26□□□□□ -0.77
KARS-203ENST00000562875 ARHGEF28Q8N1W1 1705 aaKnown RBP10.26□□□□□ -0.77
KARS-203ENST00000562875 SHPRHQ149N8 1683 aa10.25□□□□□ -0.77
KARS-203ENST00000562875 E9PSI1 815 aa10.25□□□□□ -0.77
KARS-203ENST00000562875 DEKP35659 375 aaKnown RBP10.25□□□□□ -0.77
KARS-203ENST00000562875 WDR44Q5JSH3 913 aa10.25□□□□□ -0.77
KARS-203ENST00000562875 POTEAQ6S8J7 498 aa10.25□□□□□ -0.77
KARS-203ENST00000562875 CAPN12Q6ZSI9 719 aa10.25□□□□□ -0.77
KARS-203ENST00000562875 AFAP1Q8N556 730 aa10.25□□□□□ -0.77
KARS-203ENST00000562875 AIDAQ96BJ3 306 aa10.25□□□□□ -0.77
KARS-203ENST00000562875 NGLY1Q96IV0 654 aa10.25□□□□□ -0.77
KARS-203ENST00000562875 TIMMDC1Q9NPL8 285 aa10.25□□□□□ -0.77
KARS-203ENST00000562875 HCN4Q9Y3Q4 1203 aa10.25□□□□□ -0.77
KARS-203ENST00000562875 ASXL2Q76L83 1435 aa10.24□□□□□ -0.77
KARS-203ENST00000562875 PTCD1O75127 700 aaKnown RBP10.24□□□□□ -0.77
KARS-203ENST00000562875 CANXP27824 592 aaKnown RBP10.24□□□□□ -0.77
KARS-203ENST00000562875 ARID4AP29374 1257 aaPredicted RBP10.24□□□□□ -0.77
KARS-203ENST00000562875 CFAP53Q96M91 514 aa10.24□□□□□ -0.77
KARS-203ENST00000562875 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.24□□□□□ -0.77
KARS-203ENST00000562875 RPGRIP1LQ68CZ1 1315 aa10.24□□□□□ -0.77
KARS-203ENST00000562875 GLI2P10070 1586 aa10.23□□□□□ -0.77
KARS-203ENST00000562875 UGGT1Q9NYU2 1555 aa10.23□□□□□ -0.77
KARS-203ENST00000562875 SNRPBP14678 240 aaKnown RBP10.23□□□□□ -0.77
KARS-203ENST00000562875 TXLNAP40222 546 aa10.23□□□□□ -0.77
KARS-203ENST00000562875 HIRAP54198 1017 aaPredicted RBP10.23□□□□□ -0.77
KARS-203ENST00000562875 AAMPQ13685 434 aa10.23□□□□□ -0.77
KARS-203ENST00000562875 COL26A1Q96A83 441 aa10.23□□□□□ -0.77
KARS-203ENST00000562875 SEPT3Q9UH03 358 aa10.23□□□□□ -0.77
KARS-203ENST00000562875 MTMR7Q9Y216 660 aa10.23□□□□□ -0.77
KARS-203ENST00000562875 CENPJQ9HC77 1338 aaPredicted RBP10.23□□□□□ -0.77
KARS-203ENST00000562875 POLR3AO14802 1390 aaPredicted RBP10.23□□□□□ -0.77
KARS-203ENST00000562875 PATL2C9JE40 543 aaKnown RBP10.22□□□□□ -0.77
KARS-203ENST00000562875 SLFN5Q08AF3 891 aa10.22□□□□□ -0.77
KARS-203ENST00000562875 NAA30Q147X3 362 aaPredicted RBP10.22□□□□□ -0.77
KARS-203ENST00000562875 DUSP27Q5VZP5 1158 aa10.22□□□□□ -0.77
KARS-203ENST00000562875 TXNDC2Q86VQ3 553 aa10.22□□□□□ -0.77
KARS-203ENST00000562875 ALDH16A1Q8IZ83 802 aa10.22□□□□□ -0.77
KARS-203ENST00000562875 PHACTR1Q9C0D0 580 aa10.22□□□□□ -0.77
KARS-203ENST00000562875 NSD2O96028 1365 aa10.22□□□□□ -0.77
KARS-203ENST00000562875 MLH3Q9UHC1 1453 aa10.22□□□□□ -0.77
KARS-203ENST00000562875 PIK3C2BO00750 1634 aa10.22□□□□□ -0.77
KARS-203ENST00000562875 KIF20BQ96Q89 1820 aa10.21□□□□□ -0.77
KARS-203ENST00000562875 PLIN1O60240 522 aa10.21□□□□□ -0.77
KARS-203ENST00000562875 IVNS1ABPQ9Y6Y0 642 aa10.21□□□□□ -0.77
KARS-203ENST00000562875 CGNL1Q0VF96 1302 aa10.21□□□□□ -0.78
KARS-203ENST00000562875 ZNF521Q96K83 1311 aa10.21□□□□□ -0.78
KARS-203ENST00000562875 PLEKHH1Q9ULM0 1364 aa10.21□□□□□ -0.78
KARS-203ENST00000562875 NOS1P29475 1434 aa10.21□□□□□ -0.78
KARS-203ENST00000562875 POGZQ7Z3K3 1410 aa10.21□□□□□ -0.78
KARS-203ENST00000562875 A0A1B0GTH6 734 aa10.2□□□□□ -0.78
KARS-203ENST00000562875 TATP17735 454 aaPredicted RBP10.2□□□□□ -0.78
KARS-203ENST00000562875 PTSQ03393 145 aa10.2□□□□□ -0.78
KARS-203ENST00000562875 ZDHHC3Q9NYG2 299 aa10.2□□□□□ -0.78
KARS-203ENST00000562875 ABCC3O15438 1527 aa10.19□□□□□ -0.78
KARS-203ENST00000562875 NSD3Q9BZ95 1437 aa10.19□□□□□ -0.78
KARS-203ENST00000562875 MSX1P28360 303 aa10.19□□□□□ -0.78
KARS-203ENST00000562875 SERPINB4P48594 390 aa10.19□□□□□ -0.78
KARS-203ENST00000562875 MORC1Q86VD1 984 aa10.19□□□□□ -0.78
KARS-203ENST00000562875 PUS7Q96PZ0 661 aaKnown RBP10.19□□□□□ -0.78
KARS-203ENST00000562875 GAS2L1Q99501 681 aaPredicted RBP10.19□□□□□ -0.78
KARS-203ENST00000562875 QTRT2Q9H974 415 aaKnown RBP10.19□□□□□ -0.78
KARS-203ENST00000562875 GNEQ9Y223 722 aaKnown RBP10.19□□□□□ -0.78
KARS-203ENST00000562875 DYRK1BQ9Y463 629 aa10.19□□□□□ -0.78
KARS-203ENST00000562875 MYO5BQ9ULV0 1848 aa10.19□□□□□ -0.78
KARS-203ENST00000562875 NEO1Q92859 1461 aa10.18□□□□□ -0.78
KARS-203ENST00000562875 KDM2BQ8NHM5 1336 aa10.18□□□□□ -0.78
KARS-203ENST00000562875 MAPK8IP3Q9UPT6 1336 aa10.18□□□□□ -0.78
KARS-203ENST00000562875 ZBTB7CA1YPR0 619 aa10.18□□□□□ -0.78
KARS-203ENST00000562875 POTECB2RU33 542 aa10.18□□□□□ -0.78
KARS-203ENST00000562875 ABL1P00519 1130 aa10.18□□□□□ -0.78
KARS-203ENST00000562875 C1orf53Q5VUE5 145 aa10.18□□□□□ -0.78
KARS-203ENST00000562875 C16orf46Q6P387 395 aa10.18□□□□□ -0.78
KARS-203ENST00000562875 CCDC146Q8IYE0 955 aa10.18□□□□□ -0.78
KARS-203ENST00000562875 RHPN1Q8TCX5 695 aa10.18□□□□□ -0.78
KARS-203ENST00000562875 GTF3C2Q8WUA4 911 aaPredicted RBP10.18□□□□□ -0.78
KARS-203ENST00000562875 SAP130Q9H0E3 1048 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms