RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 DBNDD2Q9BQY9 259 aa17.16■□□□□ 0.34
SPG7-206ENST00000562775 MROH5Q6ZUA9 1318 aa17.16■□□□□ 0.34
SPG7-206ENST00000562775 TIMM10P62072 90 aa17.15■□□□□ 0.34
SPG7-206ENST00000562775 ST5P78524 1137 aa17.15■□□□□ 0.34
SPG7-206ENST00000562775 QSER1Q2KHR3 1735 aa17.15■□□□□ 0.34
SPG7-206ENST00000562775 EIF5BO60841 1220 aaKnown RBP17.15■□□□□ 0.34
SPG7-206ENST00000562775 ATP5JP18859 108 aa17.15■□□□□ 0.34
SPG7-206ENST00000562775 CASC1Q6TDU7 716 aa17.15■□□□□ 0.34
SPG7-206ENST00000562775 ANKRD18AQ8IVF6 992 aa17.15■□□□□ 0.34
SPG7-206ENST00000562775 CNTROBQ8N137 903 aa17.15■□□□□ 0.34
SPG7-206ENST00000562775 VGLL2Q8N8G2 317 aa17.15■□□□□ 0.34
SPG7-206ENST00000562775 RILPL2Q969X0 211 aa17.15■□□□□ 0.34
SPG7-206ENST00000562775 PDE8BO95263 885 aa17.14■□□□□ 0.33
SPG7-206ENST00000562775 UPF2Q9HAU5 1272 aaKnown RBP17.14■□□□□ 0.33
SPG7-206ENST00000562775 TNRC6CQ9HCJ0 1690 aaKnown RBP17.13■□□□□ 0.33
SPG7-206ENST00000562775 ATP2B3Q16720 1220 aa17.13■□□□□ 0.33
SPG7-206ENST00000562775 DDX46Q7L014 1031 aaKnown RBP17.12■□□□□ 0.33
SPG7-206ENST00000562775 BSDC1Q9NW68 430 aaPredicted RBP17.12■□□□□ 0.33
SPG7-206ENST00000562775 SPEF2Q9C093 1822 aa17.11■□□□□ 0.33
SPG7-206ENST00000562775 MAP4K4O95819 1239 aaPredicted RBP17.11■□□□□ 0.33
SPG7-206ENST00000562775 RPS8P62241 208 aaKnown RBP17.11■□□□□ 0.33
SPG7-206ENST00000562775 CELF1Q92879 486 aaKnown RBP17.11■□□□□ 0.33
SPG7-206ENST00000562775 XAGE2Q96GT9 111 aa17.11■□□□□ 0.33
SPG7-206ENST00000562775 BOLA2Q9H3K6 86 aa17.11■□□□□ 0.33
SPG7-206ENST00000562775 NRXN2Q9P2S2 1712 aa17.11■□□□□ 0.33
SPG7-206ENST00000562775 COL4A1P02462 1669 aa17.11■□□□□ 0.33
SPG7-206ENST00000562775 MFAP1P55081 439 aaKnown RBP17.11■□□□□ 0.33
SPG7-206ENST00000562775 PUM3Q15397 648 aaKnown RBP17.11■□□□□ 0.33
SPG7-206ENST00000562775 CCDC158Q5M9N0 1113 aa17.11■□□□□ 0.33
SPG7-206ENST00000562775 LPIN2Q92539 896 aa17.11■□□□□ 0.33
SPG7-206ENST00000562775 EVI5LQ96CN4 794 aa17.11■□□□□ 0.33
SPG7-206ENST00000562775 PARP3Q9Y6F1 533 aa17.11■□□□□ 0.33
SPG7-206ENST00000562775 AK9Q5TCS8 1911 aa17.1■□□□□ 0.33
SPG7-206ENST00000562775 TAF1P21675 1872 aa17.1■□□□□ 0.33
SPG7-206ENST00000562775 MMP10P09238 476 aa17.1■□□□□ 0.33
SPG7-206ENST00000562775 FGFR2P21802 821 aa17.1■□□□□ 0.33
SPG7-206ENST00000562775 CHMLP26374 656 aa17.1■□□□□ 0.33
SPG7-206ENST00000562775 CHRNDQ07001 517 aa17.1■□□□□ 0.33
SPG7-206ENST00000562775 CRY2Q49AN0 593 aa17.1■□□□□ 0.33
SPG7-206ENST00000562775 GORABQ5T7V8 394 aa17.1■□□□□ 0.33
SPG7-206ENST00000562775 HELBQ8NG08 1087 aaPredicted RBP17.1■□□□□ 0.33
SPG7-206ENST00000562775 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.1■□□□□ 0.33
SPG7-206ENST00000562775 KLRG2A4D1S0 409 aaPredicted RBP17.09■□□□□ 0.33
SPG7-206ENST00000562775 ADORA1P30542 326 aa17.09■□□□□ 0.33
SPG7-206ENST00000562775 HAUS7Q99871 368 aa17.09■□□□□ 0.33
SPG7-206ENST00000562775 SLC5A1P13866 664 aa17.08■□□□□ 0.32
SPG7-206ENST00000562775 RPGRQ92834 1020 aaKnown RBP17.08■□□□□ 0.32
SPG7-206ENST00000562775 BRIP1Q9BX63 1249 aa17.08■□□□□ 0.32
SPG7-206ENST00000562775 TAF5LO75529 589 aa17.07■□□□□ 0.32
SPG7-206ENST00000562775 GRAPQ13588 217 aa17.07■□□□□ 0.32
SPG7-206ENST00000562775 TTC39AQ5SRH9 613 aa17.07■□□□□ 0.32
SPG7-206ENST00000562775 MSL1Q68DK7 614 aa17.07■□□□□ 0.32
SPG7-206ENST00000562775 GRAPLQ8TC17 118 aaPredicted RBP17.07■□□□□ 0.32
SPG7-206ENST00000562775 MINPP1Q9UNW1 487 aa17.07■□□□□ 0.32
SPG7-206ENST00000562775 IFIT1P09914 478 aaKnown RBP17.06■□□□□ 0.32
SPG7-206ENST00000562775 ARAP2Q8WZ64 1704 aa17.06■□□□□ 0.32
SPG7-206ENST00000562775 RBM17Q96I25 401 aaKnown RBP17.06■□□□□ 0.32
SPG7-206ENST00000562775 ZNF512BQ96KM6 892 aaPredicted RBP17.06■□□□□ 0.32
SPG7-206ENST00000562775 TBC1D32Q96NH3 1257 aa17.06■□□□□ 0.32
SPG7-206ENST00000562775 HOXA10P31260 410 aaPredicted RBP17.06■□□□□ 0.32
SPG7-206ENST00000562775 ANP32AP39687 249 aaKnown RBP17.06■□□□□ 0.32
SPG7-206ENST00000562775 ESYT1Q9BSJ8 1104 aa17.06■□□□□ 0.32
SPG7-206ENST00000562775 ANKRD2Q9GZV1 360 aa17.06■□□□□ 0.32
SPG7-206ENST00000562775 A0A1B0GUL6 1792 aa17.05■□□□□ 0.32
SPG7-206ENST00000562775 HIP1O00291 1037 aa17.05■□□□□ 0.32
SPG7-206ENST00000562775 REC8O95072 547 aa17.05■□□□□ 0.32
SPG7-206ENST00000562775 UBE4AQ14139 1066 aa17.05■□□□□ 0.32
SPG7-206ENST00000562775 CRAMP1Q96RY5 1269 aa17.05■□□□□ 0.32
SPG7-206ENST00000562775 DNAJC2Q99543 621 aaKnown RBP17.05■□□□□ 0.32
SPG7-206ENST00000562775 C22orf23Q9BZE7 217 aa17.05■□□□□ 0.32
SPG7-206ENST00000562775 ANKRD31Q8N7Z5 1873 aa17.04■□□□□ 0.32
SPG7-206ENST00000562775 TICAM2Q86XR7 235 aa17.04■□□□□ 0.32
SPG7-206ENST00000562775 SLC16A10Q8TF71 515 aa17.04■□□□□ 0.32
SPG7-206ENST00000562775 FSD1Q9BTV5 496 aa17.04■□□□□ 0.32
SPG7-206ENST00000562775 SNAP23O00161 211 aa17.03■□□□□ 0.32
SPG7-206ENST00000562775 UQCRFS1P1P0C7P4 283 aa17.03■□□□□ 0.32
SPG7-206ENST00000562775 PDE6BP35913 854 aa17.03■□□□□ 0.32
SPG7-206ENST00000562775 CCDC102BQ68D86 513 aa17.03■□□□□ 0.32
SPG7-206ENST00000562775 EDC3Q96F86 508 aaKnown RBP17.03■□□□□ 0.32
SPG7-206ENST00000562775 DIAPH3Q9NSV4 1193 aa17.03■□□□□ 0.32
SPG7-206ENST00000562775 PAG1Q9NWQ8 432 aa17.03■□□□□ 0.32
SPG7-206ENST00000562775 RFX7Q2KHR2 1363 aa17.03■□□□□ 0.32
SPG7-206ENST00000562775 BBOX1O75936 387 aa17.02■□□□□ 0.32
SPG7-206ENST00000562775 ARID4AP29374 1257 aaPredicted RBP17.02■□□□□ 0.32
SPG7-206ENST00000562775 KBTBD3Q8NAB2 608 aa17.02■□□□□ 0.32
SPG7-206ENST00000562775 RUFY2Q8WXA3 655 aa17.02■□□□□ 0.32
SPG7-206ENST00000562775 NDUFB9Q9Y6M9 179 aa17.02■□□□□ 0.32
SPG7-206ENST00000562775 GOLIM4O00461 696 aa17.02■□□□□ 0.31
SPG7-206ENST00000562775 PHKA1P46020 1223 aa17.02■□□□□ 0.31
SPG7-206ENST00000562775 RBM25P49756 843 aaKnown RBP17.02■□□□□ 0.31
SPG7-206ENST00000562775 USP26Q9BXU7 913 aa17.02■□□□□ 0.31
SPG7-206ENST00000562775 SGSM2O43147 1006 aa17.01■□□□□ 0.31
SPG7-206ENST00000562775 SRGNP10124 158 aa17.01■□□□□ 0.31
SPG7-206ENST00000562775 NPR1P16066 1061 aa17.01■□□□□ 0.31
SPG7-206ENST00000562775 SCARF1Q14162 830 aa17.01■□□□□ 0.31
SPG7-206ENST00000562775 CWC27Q6UX04 472 aaKnown RBP17.01■□□□□ 0.31
SPG7-206ENST00000562775 TMC4Q7Z404 712 aa17.01■□□□□ 0.31
SPG7-206ENST00000562775 PDGFDQ9GZP0 370 aaPredicted RBP17.01■□□□□ 0.31
SPG7-206ENST00000562775 EPB41L2O43491 1005 aaKnown RBP17■□□□□ 0.31
SPG7-206ENST00000562775 MCAMP43121 646 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms