RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 ALDH16A1Q8IZ83 802 aa8.73□□□□□ -1.01
UBR1-203ENST00000562173 PGBD3Q8N328 593 aa8.73□□□□□ -1.01
UBR1-203ENST00000562173 KCTD17Q8N5Z5 321 aa8.73□□□□□ -1.01
UBR1-203ENST00000562173 SLIT1O75093 1534 aa8.73□□□□□ -1.01
UBR1-203ENST00000562173 SETBP1Q9Y6X0 1596 aa8.73□□□□□ -1.01
UBR1-203ENST00000562173 LGR5O75473 907 aa8.72□□□□□ -1.01
UBR1-203ENST00000562173 TXLNAP40222 546 aa8.72□□□□□ -1.01
UBR1-203ENST00000562173 SH3PXD2AQ5TCZ1 1133 aa8.72□□□□□ -1.01
UBR1-203ENST00000562173 NLRP8Q86W28 1048 aa8.72□□□□□ -1.01
UBR1-203ENST00000562173 TRIM22Q8IYM9 498 aa8.72□□□□□ -1.01
UBR1-203ENST00000562173 RHPN1Q8TCX5 695 aa8.72□□□□□ -1.01
UBR1-203ENST00000562173 GNEQ9Y223 722 aaKnown RBP8.72□□□□□ -1.01
UBR1-203ENST00000562173 PARP3Q9Y6F1 533 aa8.72□□□□□ -1.01
UBR1-203ENST00000562173 KDM5AP29375 1690 aaKnown RBP8.72□□□□□ -1.01
UBR1-203ENST00000562173 RTEL1-TNFRSF6BF6WH68 1400 aa8.71□□□□□ -1.01
UBR1-203ENST00000562173 FAM135BQ49AJ0 1406 aa8.71□□□□□ -1.01
UBR1-203ENST00000562173 NWD1Q149M9 1564 aa8.71□□□□□ -1.02
UBR1-203ENST00000562173 CARNS1A5YM72 827 aa8.71□□□□□ -1.02
UBR1-203ENST00000562173 ARID4AP29374 1257 aaPredicted RBP8.71□□□□□ -1.02
UBR1-203ENST00000562173 EFHC2Q5JST6 749 aa8.71□□□□□ -1.02
UBR1-203ENST00000562173 SAMD5Q5TGI4 173 aa8.71□□□□□ -1.02
UBR1-203ENST00000562173 IER5Q5VY09 327 aa8.71□□□□□ -1.02
UBR1-203ENST00000562173 C16orf46Q6P387 395 aa8.71□□□□□ -1.02
UBR1-203ENST00000562173 AIDAQ96BJ3 306 aa8.71□□□□□ -1.02
UBR1-203ENST00000562173 QTRT2Q9H974 415 aaKnown RBP8.71□□□□□ -1.02
UBR1-203ENST00000562173 CUEDC1Q9NWM3 386 aaPredicted RBP8.71□□□□□ -1.02
UBR1-203ENST00000562173 EGFL7Q9UHF1 273 aa8.71□□□□□ -1.02
UBR1-203ENST00000562173 SRCAPQ6ZRS2 3230 aa8.71□□□□□ -1.02
UBR1-203ENST00000562173 GCC2Q8IWJ2 1684 aa8.71□□□□□ -1.02
UBR1-203ENST00000562173 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.71□□□□□ -1.02
UBR1-203ENST00000562173 ARHGEF5Q12774 1597 aa8.7□□□□□ -1.02
UBR1-203ENST00000562173 DIP2AQ14689 1571 aa8.7□□□□□ -1.02
UBR1-203ENST00000562173 RNFT1Q5M7Z0 435 aa8.7□□□□□ -1.02
UBR1-203ENST00000562173 FIGNL1Q6PIW4 674 aa8.7□□□□□ -1.02
UBR1-203ENST00000562173 VWA5B2Q8N398 1253 aa8.7□□□□□ -1.02
UBR1-203ENST00000562173 DDX17Q92841 729 aaKnown RBP8.7□□□□□ -1.02
UBR1-203ENST00000562173 GAS2L1Q99501 681 aaPredicted RBP8.7□□□□□ -1.02
UBR1-203ENST00000562173 COL25A1Q9BXS0 654 aaPredicted RBP8.7□□□□□ -1.02
UBR1-203ENST00000562173 GPAMQ9HCL2 828 aa8.7□□□□□ -1.02
UBR1-203ENST00000562173 ANKIB1Q9P2G1 1089 aa8.7□□□□□ -1.02
UBR1-203ENST00000562173 SHPRHQ149N8 1683 aa8.69□□□□□ -1.02
UBR1-203ENST00000562173 FAM181BA6NEQ2 426 aa8.69□□□□□ -1.02
UBR1-203ENST00000562173 BICDL1Q6ZP65 573 aa8.69□□□□□ -1.02
UBR1-203ENST00000562173 CCER1Q8TC90 406 aaPredicted RBP8.69□□□□□ -1.02
UBR1-203ENST00000562173 HELQQ8TDG4 1101 aa8.69□□□□□ -1.02
UBR1-203ENST00000562173 C7orf43Q8WVR3 580 aa8.69□□□□□ -1.02
UBR1-203ENST00000562173 CNTNAP3BQ96NU0 1288 aa8.69□□□□□ -1.02
UBR1-203ENST00000562173 MKNK1Q9BUB5 465 aa8.69□□□□□ -1.02
UBR1-203ENST00000562173 CNTNAP3Q9BZ76 1288 aa8.69□□□□□ -1.02
UBR1-203ENST00000562173 CROCC2H7BZ55 1655 aa8.69□□□□□ -1.02
UBR1-203ENST00000562173 CDC14CA4D256 554 aa8.68□□□□□ -1.02
UBR1-203ENST00000562173 TGFBR3LH3BV60 316 aa8.68□□□□□ -1.02
UBR1-203ENST00000562173 ARSJQ5FYB0 599 aaPredicted RBP8.68□□□□□ -1.02
UBR1-203ENST00000562173 RIPOR1Q6ZS17 1223 aa8.68□□□□□ -1.02
UBR1-203ENST00000562173 ZNF837Q96EG3 531 aaPredicted RBP8.68□□□□□ -1.02
UBR1-203ENST00000562173 NGLY1Q96IV0 654 aa8.68□□□□□ -1.02
UBR1-203ENST00000562173 ZIC5Q96T25 663 aa8.68□□□□□ -1.02
UBR1-203ENST00000562173 NUCKS1Q9H1E3 243 aaKnown RBP8.68□□□□□ -1.02
UBR1-203ENST00000562173 HCN4Q9Y3Q4 1203 aa8.68□□□□□ -1.02
UBR1-203ENST00000562173 RGS12O14924 1447 aa8.68□□□□□ -1.02
UBR1-203ENST00000562173 CEP162Q5TB80 1403 aa8.68□□□□□ -1.02
UBR1-203ENST00000562173 PRDM15P57071 1507 aaPredicted RBP8.68□□□□□ -1.02
UBR1-203ENST00000562173 EIF2AK4Q9P2K8 1649 aaKnown RBP8.68□□□□□ -1.02
UBR1-203ENST00000562173 A0A1W2PNR3 127 aa8.67□□□□□ -1.02
UBR1-203ENST00000562173 SF3B2Q13435 895 aaKnown RBP8.67□□□□□ -1.02
UBR1-203ENST00000562173 SV2AQ7L0J3 742 aa8.67□□□□□ -1.02
UBR1-203ENST00000562173 RUBCNLQ9H714 662 aa8.67□□□□□ -1.02
UBR1-203ENST00000562173 TMEM2Q9UHN6 1383 aa8.66□□□□□ -1.02
UBR1-203ENST00000562173 FAM157BP0CG42 384 aa8.66□□□□□ -1.02
UBR1-203ENST00000562173 COX20Q5RI15 118 aa8.66□□□□□ -1.02
UBR1-203ENST00000562173 ABTB2Q8N961 1025 aa8.66□□□□□ -1.02
UBR1-203ENST00000562173 GJA3Q9Y6H8 435 aa8.66□□□□□ -1.02
UBR1-203ENST00000562173 EFCAB6Q5THR3 1501 aa8.65□□□□□ -1.02
UBR1-203ENST00000562173 IDI1Q13907 227 aa8.65□□□□□ -1.02
UBR1-203ENST00000562173 C11orf91Q3C1V1 193 aa8.65□□□□□ -1.02
UBR1-203ENST00000562173 FOXR1Q6PIV2 292 aa8.65□□□□□ -1.02
UBR1-203ENST00000562173 NEUROD4Q9HD90 331 aa8.65□□□□□ -1.02
UBR1-203ENST00000562173 SEPT3Q9UH03 358 aa8.65□□□□□ -1.02
UBR1-203ENST00000562173 JCADQ9P266 1359 aa8.64□□□□□ -1.03
UBR1-203ENST00000562173 DGKZQ13574 1117 aa8.64□□□□□ -1.03
UBR1-203ENST00000562173 GTF3C2Q8WUA4 911 aaPredicted RBP8.64□□□□□ -1.03
UBR1-203ENST00000562173 SUSD3Q96L08 255 aa8.64□□□□□ -1.03
UBR1-203ENST00000562173 PHF24Q9UPV7 400 aa8.64□□□□□ -1.03
UBR1-203ENST00000562173 ADGRB3O60242 1522 aa8.64□□□□□ -1.03
UBR1-203ENST00000562173 AHDC1Q5TGY3 1603 aaPredicted RBP8.63□□□□□ -1.03
UBR1-203ENST00000562173 TNFRSF10BO14763 440 aa8.63□□□□□ -1.03
UBR1-203ENST00000562173 THBS1P07996 1170 aa8.63□□□□□ -1.03
UBR1-203ENST00000562173 KCNA6P17658 529 aa8.63□□□□□ -1.03
UBR1-203ENST00000562173 BRD2P25440 801 aaKnown RBP8.63□□□□□ -1.03
UBR1-203ENST00000562173 LAMC2Q13753 1193 aa8.63□□□□□ -1.03
UBR1-203ENST00000562173 UBAP2LQ14157 1087 aaKnown RBP8.63□□□□□ -1.03
UBR1-203ENST00000562173 GAS6Q14393 721 aa8.63□□□□□ -1.03
UBR1-203ENST00000562173 DBN1Q16643 649 aa8.63□□□□□ -1.03
UBR1-203ENST00000562173 CAPN12Q6ZSI9 719 aa8.63□□□□□ -1.03
UBR1-203ENST00000562173 TRERF1Q96PN7 1200 aa8.63□□□□□ -1.03
UBR1-203ENST00000562173 RRP7BPQ9NSQ0 103 aa8.63□□□□□ -1.03
UBR1-203ENST00000562173 STIM2Q9P246 746 aa8.63□□□□□ -1.03
UBR1-203ENST00000562173 LRFN2Q9ULH4 789 aa8.63□□□□□ -1.03
UBR1-203ENST00000562173 ATXN7L1Q9ULK2 861 aaPredicted RBP8.63□□□□□ -1.03
UBR1-203ENST00000562173 PCDHGC4Q9Y5F7 938 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms