RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 RPAP1Q9BWH6 1393 aaPredicted RBP8.54□□□□□ -1.04
CDH1-203ENST00000561751 SSR1P43307 286 aaKnown RBP8.54□□□□□ -1.04
CDH1-203ENST00000561751 CORO7P57737 925 aa8.54□□□□□ -1.04
CDH1-203ENST00000561751 ZRSR1Q15695 479 aaKnown RBP8.54□□□□□ -1.04
CDH1-203ENST00000561751 PLA2G2CQ5R387 149 aa8.54□□□□□ -1.04
CDH1-203ENST00000561751 EFCAB13Q8IY85 973 aa8.54□□□□□ -1.04
CDH1-203ENST00000561751 CCDC146Q8IYE0 955 aa8.54□□□□□ -1.04
CDH1-203ENST00000561751 TCP11L2Q8N4U5 519 aa8.54□□□□□ -1.04
CDH1-203ENST00000561751 CCDC191Q8NCU4 936 aa8.54□□□□□ -1.04
CDH1-203ENST00000561751 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.54□□□□□ -1.04
CDH1-203ENST00000561751 TDRD7Q8NHU6 1098 aaKnown RBP8.54□□□□□ -1.04
CDH1-203ENST00000561751 TBC1D22AQ8WUA7 517 aa8.54□□□□□ -1.04
CDH1-203ENST00000561751 MRFAP1L1Q96HT8 127 aa8.54□□□□□ -1.04
CDH1-203ENST00000561751 IFT57Q9NWB7 429 aa8.54□□□□□ -1.04
CDH1-203ENST00000561751 ZNF215Q9UL58 517 aaPredicted RBP8.54□□□□□ -1.04
CDH1-203ENST00000561751 LRRC7Q96NW7 1537 aa8.54□□□□□ -1.04
CDH1-203ENST00000561751 NPHP4O75161 1426 aaPredicted RBP8.54□□□□□ -1.04
CDH1-203ENST00000561751 SBNO2Q9Y2G9 1366 aa8.53□□□□□ -1.04
CDH1-203ENST00000561751 A0A087WUV0 522 aaPredicted RBP8.53□□□□□ -1.04
CDH1-203ENST00000561751 C21orf2O43822 256 aa8.53□□□□□ -1.04
CDH1-203ENST00000561751 NR1I2O75469 434 aa8.53□□□□□ -1.04
CDH1-203ENST00000561751 HCLS1P14317 486 aaPredicted RBP8.53□□□□□ -1.04
CDH1-203ENST00000561751 TDO2P48775 406 aa8.53□□□□□ -1.04
CDH1-203ENST00000561751 HAP1P54257 671 aaPredicted RBP8.53□□□□□ -1.04
CDH1-203ENST00000561751 MAP2K1Q02750 393 aaPredicted RBP8.53□□□□□ -1.04
CDH1-203ENST00000561751 PKP1Q13835 747 aa8.53□□□□□ -1.04
CDH1-203ENST00000561751 ZKSCAN8Q15776 578 aaPredicted RBP8.53□□□□□ -1.04
CDH1-203ENST00000561751 CCDC158Q5M9N0 1113 aa8.53□□□□□ -1.04
CDH1-203ENST00000561751 TTC22Q5TAA0 569 aa8.53□□□□□ -1.04
CDH1-203ENST00000561751 SPRYD7Q5W111 196 aa8.53□□□□□ -1.04
CDH1-203ENST00000561751 LEKR1Q6ZMV7 388 aa8.53□□□□□ -1.04
CDH1-203ENST00000561751 TICAM2Q86XR7 235 aa8.53□□□□□ -1.04
CDH1-203ENST00000561751 NUTM1Q86Y26 1132 aa8.53□□□□□ -1.04
CDH1-203ENST00000561751 NFATC2IPQ8NCF5 419 aa8.53□□□□□ -1.04
CDH1-203ENST00000561751 PUS7Q96PZ0 661 aaKnown RBP8.53□□□□□ -1.04
CDH1-203ENST00000561751 RGS17Q9UGC6 210 aaPredicted RBP8.53□□□□□ -1.04
CDH1-203ENST00000561751 PPIP5K1Q6PFW1 1433 aa8.53□□□□□ -1.04
CDH1-203ENST00000561751 TMCO5BA8MYB1 307 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 ZBTB7BO15156 539 aaPredicted RBP8.52□□□□□ -1.05
CDH1-203ENST00000561751 TUBBP07437 444 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 LIG1P18858 919 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 ZNF75DP51815 510 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 GSDMDP57764 484 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 SETQ01105 290 aaPredicted RBP8.52□□□□□ -1.05
CDH1-203ENST00000561751 SF3B2Q13435 895 aaKnown RBP8.52□□□□□ -1.05
CDH1-203ENST00000561751 NBPF9Q3BBW0 867 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 C11orf91Q3C1V1 193 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 RBM43Q6ZSC3 357 aaKnown RBP8.52□□□□□ -1.05
CDH1-203ENST00000561751 CCDC186Q7Z3E2 898 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 C10orf67Q8IYJ2 551 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 C17orf53Q8N3J3 647 aaPredicted RBP8.52□□□□□ -1.05
CDH1-203ENST00000561751 ZGPATQ8N5A5 531 aaKnown RBP8.52□□□□□ -1.05
CDH1-203ENST00000561751 ANKRD20A12PQ8NF67 263 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 TMX3Q96JJ7 454 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 CFAP53Q96M91 514 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 LNPKQ9C0E8 428 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 IMPACTQ9P2X3 320 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 STRCP1A6NGW2 1772 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 UGGT1Q9NYU2 1555 aa8.52□□□□□ -1.05
CDH1-203ENST00000561751 KIAA1210Q9ULL0 1709 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 USP32Q8NFA0 1604 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 CCDC189A1A4V9 331 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 EFCAB8A8MWE9 144 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 ERC2O15083 957 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 HMGB1P09429 215 aaKnown RBP8.51□□□□□ -1.05
CDH1-203ENST00000561751 NEFHP12036 1026 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 PTGS1P23219 599 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 MAP2K2P36507 400 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 EIF5P55010 431 aaKnown RBP8.51□□□□□ -1.05
CDH1-203ENST00000561751 ANKRD45Q5TZF3 282 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 NBPF11Q86T75 865 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 ANKLE2Q86XL3 938 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 ERC1Q8IUD2 1116 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 ITPRIPQ8IWB1 547 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 C16orf45Q96MC5 204 aaPredicted RBP8.51□□□□□ -1.05
CDH1-203ENST00000561751 SLC6A16Q9GZN6 736 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 OSBPL3Q9H4L5 887 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 DCTPP1Q9H773 170 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 SUFUQ9UMX1 484 aa8.51□□□□□ -1.05
CDH1-203ENST00000561751 NSD2O96028 1365 aa8.5□□□□□ -1.05
CDH1-203ENST00000561751 SHPRHQ149N8 1683 aa8.5□□□□□ -1.05
CDH1-203ENST00000561751 PATL2C9JE40 543 aaKnown RBP8.5□□□□□ -1.05
CDH1-203ENST00000561751 RGS12O14924 1447 aa8.5□□□□□ -1.05
CDH1-203ENST00000561751 NRDCO43847 1150 aa8.5□□□□□ -1.05
CDH1-203ENST00000561751 FAM135BQ49AJ0 1406 aa8.5□□□□□ -1.05
CDH1-203ENST00000561751 NBPF10Q6P3W6 841 aaKnown RBP8.5□□□□□ -1.05
CDH1-203ENST00000561751 ZNF598Q86UK7 904 aaKnown RBP8.5□□□□□ -1.05
CDH1-203ENST00000561751 PLEKHM2Q8IWE5 1019 aa8.5□□□□□ -1.05
CDH1-203ENST00000561751 LRRC8AQ8IWT6 810 aa8.5□□□□□ -1.05
CDH1-203ENST00000561751 TMEM57Q8N5G2 664 aa8.5□□□□□ -1.05
CDH1-203ENST00000561751 GPR161Q8N6U8 529 aaKnown RBP8.5□□□□□ -1.05
CDH1-203ENST00000561751 JMYQ8N9B5 988 aa8.5□□□□□ -1.05
CDH1-203ENST00000561751 HNRNPLLQ8WVV9 542 aaKnown RBP8.5□□□□□ -1.05
CDH1-203ENST00000561751 FAM210AQ96ND0 272 aa8.5□□□□□ -1.05
CDH1-203ENST00000561751 ZSCAN16Q9H4T2 348 aaPredicted RBP8.5□□□□□ -1.05
CDH1-203ENST00000561751 PHLPP2Q6ZVD8 1323 aa8.5□□□□□ -1.05
CDH1-203ENST00000561751 KDM5AP29375 1690 aaKnown RBP8.49□□□□□ -1.05
CDH1-203ENST00000561751 MYOM1P52179 1685 aa8.49□□□□□ -1.05
CDH1-203ENST00000561751 PTCH1Q13635 1447 aa8.49□□□□□ -1.05
CDH1-203ENST00000561751 KLHL33A6NCF5 533 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms