RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
AC010542.3-202ENST00000561728 NF2P35240 595 aa13.12□□□□□ -0.31
AC010542.3-202ENST00000561728 GJA8P48165 433 aa13.12□□□□□ -0.31
AC010542.3-202ENST00000561728 EIF4A2Q14240 407 aaKnown RBP13.12□□□□□ -0.31
AC010542.3-202ENST00000561728 DPP8Q6V1X1 898 aaPredicted RBP13.12□□□□□ -0.31
AC010542.3-202ENST00000561728 NUTM1Q86Y26 1132 aa13.12□□□□□ -0.31
AC010542.3-202ENST00000561728 TTC5Q8N0Z6 440 aa13.12□□□□□ -0.31
AC010542.3-202ENST00000561728 RTFDC1Q9BY42 306 aaPredicted RBP13.12□□□□□ -0.31
AC010542.3-202ENST00000561728 IGF2BP3O00425 579 aaKnown RBP eCLIP13.11□□□□□ -0.31
AC010542.3-202ENST00000561728 ECM2O94769 699 aaPredicted RBP13.11□□□□□ -0.31
AC010542.3-202ENST00000561728 MTFR1Q15390 333 aa13.11□□□□□ -0.31
AC010542.3-202ENST00000561728 CRAMP1Q96RY5 1269 aa13.11□□□□□ -0.31
AC010542.3-202ENST00000561728 P2RX7Q99572 595 aaKnown RBP13.11□□□□□ -0.31
AC010542.3-202ENST00000561728 TEX13AQ9BXU3 409 aaPredicted RBP13.11□□□□□ -0.31
AC010542.3-202ENST00000561728 NCOR1O75376 2440 aa13.11□□□□□ -0.31
AC010542.3-202ENST00000561728 KIF20BQ96Q89 1820 aa13.11□□□□□ -0.31
AC010542.3-202ENST00000561728 POTEB2H3BUK9 544 aa13.1□□□□□ -0.31
AC010542.3-202ENST00000561728 ZNF697Q5TEC3 545 aa13.1□□□□□ -0.31
AC010542.3-202ENST00000561728 C1QTNF1Q9BXJ1 281 aa13.1□□□□□ -0.31
AC010542.3-202ENST00000561728 PTPN12Q05209 780 aaKnown RBP13.09□□□□□ -0.31
AC010542.3-202ENST00000561728 SCARF1Q14162 830 aa13.09□□□□□ -0.31
AC010542.3-202ENST00000561728 RIC1Q4ADV7 1423 aa13.09□□□□□ -0.31
AC010542.3-202ENST00000561728 ARMC9Q7Z3E5 817 aa13.09□□□□□ -0.31
AC010542.3-202ENST00000561728 ZNF496Q96IT1 587 aaPredicted RBP13.09□□□□□ -0.31
AC010542.3-202ENST00000561728 UBE2OQ9C0C9 1292 aaKnown RBP13.09□□□□□ -0.31
AC010542.3-202ENST00000561728 ATP6V0A2Q9Y487 856 aa13.09□□□□□ -0.31
AC010542.3-202ENST00000561728 ZNF646O15015 1829 aaPredicted RBP13.09□□□□□ -0.31
AC010542.3-202ENST00000561728 ABCC12Q96J65 1359 aa13.08□□□□□ -0.31
AC010542.3-202ENST00000561728 MUC6Q6W4X9 2439 aa13.08□□□□□ -0.32
AC010542.3-202ENST00000561728 A1BGP04217 495 aa13.08□□□□□ -0.32
AC010542.3-202ENST00000561728 GJB1P08034 283 aa13.08□□□□□ -0.32
AC010542.3-202ENST00000561728 CDX2Q99626 313 aaPredicted RBP13.08□□□□□ -0.32
AC010542.3-202ENST00000561728 SPINK5Q9NQ38 1064 aaPredicted RBP13.08□□□□□ -0.32
AC010542.3-202ENST00000561728 ZMYND8Q9ULU4 1186 aaPredicted RBP13.08□□□□□ -0.32
AC010542.3-202ENST00000561728 PRAMEF18Q5VWM3 479 aa13.07□□□□□ -0.32
AC010542.3-202ENST00000561728 NYXQ9GZU5 481 aa13.07□□□□□ -0.32
AC010542.3-202ENST00000561728 LGR6Q9HBX8 967 aa13.07□□□□□ -0.32
AC010542.3-202ENST00000561728 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.07□□□□□ -0.32
AC010542.3-202ENST00000561728 MAGEA10P43363 369 aaPredicted RBP13.06□□□□□ -0.32
AC010542.3-202ENST00000561728 RNF208Q9H0X6 261 aa13.06□□□□□ -0.32
AC010542.3-202ENST00000561728 UBR2Q8IWV8 1755 aa13.05□□□□□ -0.32
AC010542.3-202ENST00000561728 RNMTO43148 476 aaKnown RBP13.05□□□□□ -0.32
AC010542.3-202ENST00000561728 ZBTB48P10074 688 aaPredicted RBP13.05□□□□□ -0.32
AC010542.3-202ENST00000561728 PRKG1Q13976 671 aa13.05□□□□□ -0.32
AC010542.3-202ENST00000561728 C7orf61Q8IZ16 206 aa13.05□□□□□ -0.32
AC010542.3-202ENST00000561728 SCAF8Q9UPN6 1271 aaKnown RBP13.05□□□□□ -0.32
AC010542.3-202ENST00000561728 HEG1Q9ULI3 1381 aa13.05□□□□□ -0.32
AC010542.3-202ENST00000561728 CCL5P13501 91 aa13.04□□□□□ -0.32
AC010542.3-202ENST00000561728 KIF22Q14807 665 aa13.04□□□□□ -0.32
AC010542.3-202ENST00000561728 U2AF1L4Q8WU68 220 aaKnown RBP13.04□□□□□ -0.32
AC010542.3-202ENST00000561728 SLC10A4Q96EP9 437 aa13.04□□□□□ -0.32
AC010542.3-202ENST00000561728 DBNDD1Q9H9R9 158 aa13.04□□□□□ -0.32
AC010542.3-202ENST00000561728 PRMT2P55345 433 aa13.03□□□□□ -0.32
AC010542.3-202ENST00000561728 POLKQ9UBT6 870 aa13.03□□□□□ -0.32
AC010542.3-202ENST00000561728 RGL2O15211 777 aa13.02□□□□□ -0.33
AC010542.3-202ENST00000561728 FOSL2P15408 326 aa13.02□□□□□ -0.33
AC010542.3-202ENST00000561728 SYN1P17600 705 aa13.02□□□□□ -0.33
AC010542.3-202ENST00000561728 MYLIPQ8WY64 445 aa13.02□□□□□ -0.33
AC010542.3-202ENST00000561728 BDP1A6H8Y1 2624 aa13.02□□□□□ -0.33
AC010542.3-202ENST00000561728 GNRH1P01148 92 aa13.01□□□□□ -0.33
AC010542.3-202ENST00000561728 UBXN2AP68543 259 aa13.01□□□□□ -0.33
AC010542.3-202ENST00000561728 LDLRAD1Q5T700 205 aa13.01□□□□□ -0.33
AC010542.3-202ENST00000561728 AEBP1Q8IUX7 1158 aa13.01□□□□□ -0.33
AC010542.3-202ENST00000561728 L3MBTL2Q969R5 705 aa13.01□□□□□ -0.33
AC010542.3-202ENST00000561728 WNK4Q96J92 1243 aa13.01□□□□□ -0.33
AC010542.3-202ENST00000561728 CARD11Q9BXL7 1154 aa13.01□□□□□ -0.33
AC010542.3-202ENST00000561728 BIN2Q9UBW5 565 aaPredicted RBP13.01□□□□□ -0.33
AC010542.3-202ENST00000561728 ANGEL1Q9UNK9 670 aaKnown RBP13.01□□□□□ -0.33
AC010542.3-202ENST00000561728 TAF1P21675 1872 aa13□□□□□ -0.33
AC010542.3-202ENST00000561728 GRK4P32298 578 aa13□□□□□ -0.33
AC010542.3-202ENST00000561728 PIP4K2AP48426 406 aaPredicted RBP13□□□□□ -0.33
AC010542.3-202ENST00000561728 MRE11P49959 708 aa13□□□□□ -0.33
AC010542.3-202ENST00000561728 SP8Q8IXZ3 490 aa13□□□□□ -0.33
AC010542.3-202ENST00000561728 ADAMTS19Q8TE59 1207 aa13□□□□□ -0.33
AC010542.3-202ENST00000561728 UHRF1Q96T88 793 aaPredicted RBP13□□□□□ -0.33
AC010542.3-202ENST00000561728 ZFYVE28Q9HCC9 887 aa13□□□□□ -0.33
AC010542.3-202ENST00000561728 RTL9Q8NET4 1388 aa12.99□□□□□ -0.33
AC010542.3-202ENST00000561728 WASHC4Q2M389 1173 aa12.99□□□□□ -0.33
AC010542.3-202ENST00000561728 NECTIN2Q92692 538 aa12.99□□□□□ -0.33
AC010542.3-202ENST00000561728 ALPK3Q96L96 1907 aa12.98□□□□□ -0.33
AC010542.3-202ENST00000561728 ABCC4O15439 1325 aa12.98□□□□□ -0.33
AC010542.3-202ENST00000561728 ECE2O60344 883 aa12.98□□□□□ -0.33
AC010542.3-202ENST00000561728 SGPL1O95470 568 aa12.98□□□□□ -0.33
AC010542.3-202ENST00000561728 TFRCP02786 760 aaKnown RBP12.98□□□□□ -0.33
AC010542.3-202ENST00000561728 ZNF280AP59817 542 aaPredicted RBP12.98□□□□□ -0.33
AC010542.3-202ENST00000561728 POLA2Q14181 598 aa12.98□□□□□ -0.33
AC010542.3-202ENST00000561728 TAF1CQ15572 869 aaPredicted RBP12.98□□□□□ -0.33
AC010542.3-202ENST00000561728 RAET1EQ8TD07 263 aa12.98□□□□□ -0.33
AC010542.3-202ENST00000561728 LRFN3Q9BTN0 628 aa12.98□□□□□ -0.33
AC010542.3-202ENST00000561728 ARHGAP39Q9C0H5 1083 aa12.98□□□□□ -0.33
AC010542.3-202ENST00000561728 FAM205AQ6ZU69 1335 aa12.97□□□□□ -0.33
AC010542.3-202ENST00000561728 BBOX1O75936 387 aa12.97□□□□□ -0.33
AC010542.3-202ENST00000561728 CAPN2P17655 700 aa12.97□□□□□ -0.33
AC010542.3-202ENST00000561728 ZNF790Q6PG37 636 aa12.97□□□□□ -0.33
AC010542.3-202ENST00000561728 IL27Q8NEV9 243 aa12.97□□□□□ -0.33
AC010542.3-202ENST00000561728 TRIM47Q96LD4 638 aa12.97□□□□□ -0.33
AC010542.3-202ENST00000561728 FMNL2Q96PY5 1086 aa12.97□□□□□ -0.33
AC010542.3-202ENST00000561728 SEMA6BQ9H3T3 888 aa12.97□□□□□ -0.33
AC010542.3-202ENST00000561728 MYOZ2Q9NPC6 264 aa12.97□□□□□ -0.33
AC010542.3-202ENST00000561728 KCNQ5Q9NR82 932 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms