RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 ECE2O60344 883 aa15.26■□□□□ 0.03
KNSTRN-211ENST00000560673 SPRYD7Q5W111 196 aa15.26■□□□□ 0.03
KNSTRN-211ENST00000560673 NUP98P52948 1817 aa15.26■□□□□ 0.03
KNSTRN-211ENST00000560673 MANSC4A6NHS7 340 aaPredicted RBP15.25■□□□□ 0.03
KNSTRN-211ENST00000560673 VIL1P09327 827 aaKnown RBP15.25■□□□□ 0.03
KNSTRN-211ENST00000560673 ZNF280AP59817 542 aaPredicted RBP15.25■□□□□ 0.03
KNSTRN-211ENST00000560673 PRAMEF18Q5VWM3 479 aa15.25■□□□□ 0.03
KNSTRN-211ENST00000560673 DDX46Q7L014 1031 aaKnown RBP15.25■□□□□ 0.03
KNSTRN-211ENST00000560673 TMC4Q7Z404 712 aa15.25■□□□□ 0.03
KNSTRN-211ENST00000560673 ZNF34Q8IZ26 560 aa15.25■□□□□ 0.03
KNSTRN-211ENST00000560673 STXBP5LQ9Y2K9 1186 aa15.25■□□□□ 0.03
KNSTRN-211ENST00000560673 SPTBN5Q9NRC6 3674 aaKnown RBP15.24■□□□□ 0.03
KNSTRN-211ENST00000560673 DUOX1Q9NRD9 1551 aa15.24■□□□□ 0.03
KNSTRN-211ENST00000560673 MYCP01106 439 aaPredicted RBP15.24■□□□□ 0.03
KNSTRN-211ENST00000560673 PTPN12Q05209 780 aaKnown RBP15.24■□□□□ 0.03
KNSTRN-211ENST00000560673 GRAPQ13588 217 aa15.24■□□□□ 0.03
KNSTRN-211ENST00000560673 DOK7Q18PE1 504 aa15.24■□□□□ 0.03
KNSTRN-211ENST00000560673 SLC10A5Q5PT55 438 aa15.24■□□□□ 0.03
KNSTRN-211ENST00000560673 GRAPLQ8TC17 118 aaPredicted RBP15.24■□□□□ 0.03
KNSTRN-211ENST00000560673 NECTIN2Q92692 538 aa15.24■□□□□ 0.03
KNSTRN-211ENST00000560673 PANK3Q9H999 370 aa15.24■□□□□ 0.03
KNSTRN-211ENST00000560673 SCAF8Q9UPN6 1271 aaKnown RBP15.24■□□□□ 0.03
KNSTRN-211ENST00000560673 NR2E3Q9Y5X4 410 aa15.24■□□□□ 0.03
KNSTRN-211ENST00000560673 WTIPA6NIX2 430 aaPredicted RBP15.23■□□□□ 0.03
KNSTRN-211ENST00000560673 C6orf229H3BNL8 230 aa15.23■□□□□ 0.03
KNSTRN-211ENST00000560673 DIAPH1O60610 1272 aaKnown RBP15.23■□□□□ 0.03
KNSTRN-211ENST00000560673 SP3Q02447 781 aa15.23■□□□□ 0.03
KNSTRN-211ENST00000560673 PARP10Q53GL7 1025 aa15.23■□□□□ 0.03
KNSTRN-211ENST00000560673 ARMC9Q7Z3E5 817 aa15.23■□□□□ 0.03
KNSTRN-211ENST00000560673 ZBTB3Q9H5J0 574 aa15.23■□□□□ 0.03
KNSTRN-211ENST00000560673 PRDM6Q9NQX0 595 aa15.23■□□□□ 0.03
KNSTRN-211ENST00000560673 NSFL1CQ9UNZ2 370 aaKnown RBP15.23■□□□□ 0.03
KNSTRN-211ENST00000560673 ARHGEF6Q15052 776 aa15.22■□□□□ 0.03
KNSTRN-211ENST00000560673 TTLL7Q6ZT98 887 aa15.22■□□□□ 0.03
KNSTRN-211ENST00000560673 DEFB123Q8N688 67 aa15.22■□□□□ 0.03
KNSTRN-211ENST00000560673 EYA3Q99504 573 aa15.22■□□□□ 0.03
KNSTRN-211ENST00000560673 HTATIP2Q9BUP3 242 aa15.22■□□□□ 0.03
KNSTRN-211ENST00000560673 UTP14AQ9BVJ6 771 aaKnown RBP15.22■□□□□ 0.03
KNSTRN-211ENST00000560673 MYOZ2Q9NPC6 264 aa15.22■□□□□ 0.03
KNSTRN-211ENST00000560673 PTCH2Q9Y6C5 1203 aa15.22■□□□□ 0.03
KNSTRN-211ENST00000560673 CLSPNQ9HAW4 1339 aa15.21■□□□□ 0.03
KNSTRN-211ENST00000560673 IGF2BP3O00425 579 aaKnown RBP eCLIP15.21■□□□□ 0.03
KNSTRN-211ENST00000560673 CRHR2Q13324 411 aa15.21■□□□□ 0.03
KNSTRN-211ENST00000560673 OTUD7BQ6GQQ9 843 aa15.21■□□□□ 0.03
KNSTRN-211ENST00000560673 GPR153Q6NV75 609 aa15.21■□□□□ 0.03
KNSTRN-211ENST00000560673 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.21■□□□□ 0.03
KNSTRN-211ENST00000560673 AGBL3Q8NEM8 1001 aa15.21■□□□□ 0.03
KNSTRN-211ENST00000560673 GIGYF2Q6Y7W6 1299 aaKnown RBP15.2■□□□□ 0.02
KNSTRN-211ENST00000560673 G3V3G9 751 aa15.19■□□□□ 0.02
KNSTRN-211ENST00000560673 USP17L8P0C7I0 530 aa15.19■□□□□ 0.02
KNSTRN-211ENST00000560673 CAP1Q01518 475 aa15.19■□□□□ 0.02
KNSTRN-211ENST00000560673 PRKG1Q13976 671 aa15.19■□□□□ 0.02
KNSTRN-211ENST00000560673 LDLRAD1Q5T700 205 aa15.19■□□□□ 0.02
KNSTRN-211ENST00000560673 DCAF8Q5TAQ9 597 aa15.19■□□□□ 0.02
KNSTRN-211ENST00000560673 RSBN1LQ6PCB5 846 aaPredicted RBP15.19■□□□□ 0.02
KNSTRN-211ENST00000560673 SLC10A4Q96EP9 437 aa15.19■□□□□ 0.02
KNSTRN-211ENST00000560673 POLLQ9UGP5 575 aa15.19■□□□□ 0.02
KNSTRN-211ENST00000560673 RRP7AQ9Y3A4 280 aaKnown RBP15.19■□□□□ 0.02
KNSTRN-211ENST00000560673 DDX60Q8IY21 1712 aaKnown RBP15.19■□□□□ 0.02
KNSTRN-211ENST00000560673 KDM3BQ7LBC6 1761 aa15.19■□□□□ 0.02
KNSTRN-211ENST00000560673 ZBTB7BO15156 539 aaPredicted RBP15.18■□□□□ 0.02
KNSTRN-211ENST00000560673 ZBTB48P10074 688 aaPredicted RBP15.18■□□□□ 0.02
KNSTRN-211ENST00000560673 HCLS1P14317 486 aaPredicted RBP15.18■□□□□ 0.02
KNSTRN-211ENST00000560673 MYL6BP14649 208 aa15.17■□□□□ 0.02
KNSTRN-211ENST00000560673 SH3TC2Q8TF17 1288 aa15.17■□□□□ 0.02
KNSTRN-211ENST00000560673 ZC3H12CQ9C0D7 883 aaKnown RBP15.17■□□□□ 0.02
KNSTRN-211ENST00000560673 ANGEL1Q9UNK9 670 aaKnown RBP15.17■□□□□ 0.02
KNSTRN-211ENST00000560673 Q7L0L9 218 aa15.16■□□□□ 0.02
KNSTRN-211ENST00000560673 SHISA4Q96DD7 197 aa15.16■□□□□ 0.02
KNSTRN-211ENST00000560673 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.16■□□□□ 0.02
KNSTRN-211ENST00000560673 KNSTRNQ9Y448 316 aa15.16■□□□□ 0.02
KNSTRN-211ENST00000560673 LRRC37AA6NMS7 1700 aa15.16■□□□□ 0.02
KNSTRN-211ENST00000560673 ANKRD36CQ5JPF3 1778 aa15.16■□□□□ 0.02
KNSTRN-211ENST00000560673 SCN9AQ15858 1988 aa15.15■□□□□ 0.02
KNSTRN-211ENST00000560673 U2SURPO15042 1029 aaKnown RBP15.15■□□□□ 0.02
KNSTRN-211ENST00000560673 GPSM2P81274 684 aa15.15■□□□□ 0.02
KNSTRN-211ENST00000560673 NBPF9Q3BBW0 867 aa15.15■□□□□ 0.02
KNSTRN-211ENST00000560673 NKX2-3Q8TAU0 364 aa15.15■□□□□ 0.02
KNSTRN-211ENST00000560673 RTF1Q92541 710 aaKnown RBP15.15■□□□□ 0.02
KNSTRN-211ENST00000560673 WNK4Q96J92 1243 aa15.15■□□□□ 0.02
KNSTRN-211ENST00000560673 TTC28Q96AY4 2481 aa15.15■□□□□ 0.02
KNSTRN-211ENST00000560673 TBC1D16Q8TBP0 767 aa15.14■□□□□ 0.01
KNSTRN-211ENST00000560673 CNKSR2Q8WXI2 1034 aa15.14■□□□□ 0.01
KNSTRN-211ENST00000560673 GMLQ99445 158 aa15.14■□□□□ 0.01
KNSTRN-211ENST00000560673 MTMR10Q9NXD2 777 aa15.14■□□□□ 0.01
KNSTRN-211ENST00000560673 STAP2Q9UGK3 403 aa15.14■□□□□ 0.01
KNSTRN-211ENST00000560673 ERBB4Q15303 1308 aa15.14■□□□□ 0.01
KNSTRN-211ENST00000560673 LAMB2P55268 1798 aa15.13■□□□□ 0.01
KNSTRN-211ENST00000560673 EYSQ5T1H1 3165 aa15.13■□□□□ 0.01
KNSTRN-211ENST00000560673 COL9A1P20849 921 aa15.13■□□□□ 0.01
KNSTRN-211ENST00000560673 MCM10Q7L590 875 aa15.13■□□□□ 0.01
KNSTRN-211ENST00000560673 LAMB4A4D0S4 1761 aa15.13■□□□□ 0.01
KNSTRN-211ENST00000560673 TAF1P21675 1872 aa15.12■□□□□ 0.01
KNSTRN-211ENST00000560673 UBE2Q1Q7Z7E8 422 aa15.12■□□□□ 0.01
KNSTRN-211ENST00000560673 MUC3AQ02505 3323 aa15.12■□□□□ 0.01
KNSTRN-211ENST00000560673 EVI5O60447 810 aa15.11■□□□□ 0.01
KNSTRN-211ENST00000560673 CELF1Q92879 486 aaKnown RBP15.11■□□□□ 0.01
KNSTRN-211ENST00000560673 PHACTR3Q96KR7 559 aa15.11■□□□□ 0.01
KNSTRN-211ENST00000560673 TRMT112Q9UI30 125 aaKnown RBP15.11■□□□□ 0.01
KNSTRN-211ENST00000560673 PRUNE2Q8WUY3 3088 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms