RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 PRAMEF22A3QJZ6 481 aa10.19□□□□□ -0.78
CCDC33-209ENST00000560565 KIF3CO14782 793 aa10.19□□□□□ -0.78
CCDC33-209ENST00000560565 SDSP20132 328 aa10.19□□□□□ -0.78
CCDC33-209ENST00000560565 IL6STP40189 918 aaPredicted RBP10.19□□□□□ -0.78
CCDC33-209ENST00000560565 UBE2HP62256 183 aa10.19□□□□□ -0.78
CCDC33-209ENST00000560565 DMTNQ08495 405 aa10.19□□□□□ -0.78
CCDC33-209ENST00000560565 G2E3Q7L622 706 aa10.19□□□□□ -0.78
CCDC33-209ENST00000560565 GPT2Q8TD30 523 aa10.19□□□□□ -0.78
CCDC33-209ENST00000560565 ZNF526Q8TF50 670 aaPredicted RBP10.19□□□□□ -0.78
CCDC33-209ENST00000560565 MYH3P11055 1940 aa10.19□□□□□ -0.78
CCDC33-209ENST00000560565 CD2BP2O95400 341 aaKnown RBP10.18□□□□□ -0.78
CCDC33-209ENST00000560565 YBX3P16989 372 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCDC33-209ENST00000560565 TM4SF1P30408 202 aa10.18□□□□□ -0.78
CCDC33-209ENST00000560565 NEK4P51957 841 aa10.18□□□□□ -0.78
CCDC33-209ENST00000560565 CEP85Q6P2H3 762 aa10.18□□□□□ -0.78
CCDC33-209ENST00000560565 KSR2Q6VAB6 950 aa10.18□□□□□ -0.78
CCDC33-209ENST00000560565 TMX3Q96JJ7 454 aa10.18□□□□□ -0.78
CCDC33-209ENST00000560565 TBC1D2BQ9UPU7 963 aa10.18□□□□□ -0.78
CCDC33-209ENST00000560565 TNRC18O15417 2968 aaPredicted RBP10.17□□□□□ -0.78
CCDC33-209ENST00000560565 GRIN3BO60391 1043 aa10.17□□□□□ -0.78
CCDC33-209ENST00000560565 ALDH1L1O75891 902 aa10.17□□□□□ -0.78
CCDC33-209ENST00000560565 MX1P20591 662 aa10.17□□□□□ -0.78
CCDC33-209ENST00000560565 NOLC1Q14978 699 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC33-209ENST00000560565 DNAAF4Q8WXU2 420 aa10.17□□□□□ -0.78
CCDC33-209ENST00000560565 ZSCAN31Q96LW9 406 aaPredicted RBP10.17□□□□□ -0.78
CCDC33-209ENST00000560565 TMEM63CQ9P1W3 806 aa10.17□□□□□ -0.78
CCDC33-209ENST00000560565 POLRMTO00411 1230 aaKnown RBP10.16□□□□□ -0.78
CCDC33-209ENST00000560565 NEMFO60524 1076 aa10.16□□□□□ -0.78
CCDC33-209ENST00000560565 RAB11FIP3O75154 756 aa10.16□□□□□ -0.78
CCDC33-209ENST00000560565 GNAI2P04899 355 aa10.16□□□□□ -0.78
CCDC33-209ENST00000560565 PIP4K2AP48426 406 aaPredicted RBP10.16□□□□□ -0.78
CCDC33-209ENST00000560565 TGFB2P61812 414 aa10.16□□□□□ -0.78
CCDC33-209ENST00000560565 RBM10P98175 930 aaKnown RBP10.16□□□□□ -0.78
CCDC33-209ENST00000560565 DDR1Q08345 913 aa10.16□□□□□ -0.78
CCDC33-209ENST00000560565 NFIXQ14938 502 aa10.16□□□□□ -0.78
CCDC33-209ENST00000560565 PDIA6Q15084 440 aa10.16□□□□□ -0.78
CCDC33-209ENST00000560565 HSP90AB4PQ58FF6 505 aa10.16□□□□□ -0.78
CCDC33-209ENST00000560565 SIRT2Q8IXJ6 389 aa10.16□□□□□ -0.78
CCDC33-209ENST00000560565 NECTIN2Q92692 538 aa10.16□□□□□ -0.78
CCDC33-209ENST00000560565 PHAXQ9H814 394 aaKnown RBP10.16□□□□□ -0.78
CCDC33-209ENST00000560565 BCL2L12Q9HB09 334 aa10.16□□□□□ -0.78
CCDC33-209ENST00000560565 PAXBP1Q9Y5B6 917 aa10.16□□□□□ -0.78
CCDC33-209ENST00000560565 KIF13BQ9NQT8 1826 aa10.16□□□□□ -0.78
CCDC33-209ENST00000560565 ADCY9O60503 1353 aa10.15□□□□□ -0.78
CCDC33-209ENST00000560565 A0A0G2JLW4 131 aa10.15□□□□□ -0.78
CCDC33-209ENST00000560565 PI4KAP2A4QPH2 592 aa10.15□□□□□ -0.78
CCDC33-209ENST00000560565 TUBB4AP04350 444 aa10.15□□□□□ -0.78
CCDC33-209ENST00000560565 CCDC192P0DO97 292 aa10.15□□□□□ -0.78
CCDC33-209ENST00000560565 PDCP20941 246 aa10.15□□□□□ -0.78
CCDC33-209ENST00000560565 RNF20Q5VTR2 975 aa10.15□□□□□ -0.78
CCDC33-209ENST00000560565 SLC4A10Q6U841 1118 aa10.15□□□□□ -0.78
CCDC33-209ENST00000560565 BICDL1Q6ZP65 573 aa10.15□□□□□ -0.78
CCDC33-209ENST00000560565 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.15□□□□□ -0.78
CCDC33-209ENST00000560565 DZIP3Q86Y13 1208 aaKnown RBP10.15□□□□□ -0.78
CCDC33-209ENST00000560565 PI4KAP1Q8N8J0 262 aa10.15□□□□□ -0.78
CCDC33-209ENST00000560565 RUFY2Q8WXA3 655 aa10.15□□□□□ -0.78
CCDC33-209ENST00000560565 CHMP4CQ96CF2 233 aa10.15□□□□□ -0.78
CCDC33-209ENST00000560565 ESYT1Q9BSJ8 1104 aa10.15□□□□□ -0.78
CCDC33-209ENST00000560565 LRRCC1Q9C099 1032 aa10.15□□□□□ -0.78
CCDC33-209ENST00000560565 SH2B1Q9NRF2 756 aaPredicted RBP10.15□□□□□ -0.78
CCDC33-209ENST00000560565 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.15□□□□□ -0.78
CCDC33-209ENST00000560565 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.15□□□□□ -0.78
CCDC33-209ENST00000560565 BCORQ6W2J9 1755 aa10.14□□□□□ -0.79
CCDC33-209ENST00000560565 CCDC171Q6TFL3 1326 aa10.14□□□□□ -0.79
CCDC33-209ENST00000560565 NBPF26B4DH59 902 aa10.14□□□□□ -0.79
CCDC33-209ENST00000560565 F6X3S4 739 aa10.14□□□□□ -0.79
CCDC33-209ENST00000560565 KIF2AO00139 706 aaPredicted RBP10.14□□□□□ -0.79
CCDC33-209ENST00000560565 KDM4AO75164 1064 aa10.14□□□□□ -0.79
CCDC33-209ENST00000560565 SERPINB2P05120 415 aa10.14□□□□□ -0.79
CCDC33-209ENST00000560565 PDE1AP54750 535 aa10.14□□□□□ -0.79
CCDC33-209ENST00000560565 GABPB1Q06547 395 aaPredicted RBP10.14□□□□□ -0.79
CCDC33-209ENST00000560565 NEXNQ0ZGT2 675 aa10.14□□□□□ -0.79
CCDC33-209ENST00000560565 NBPF10Q6P3W6 841 aaKnown RBP10.14□□□□□ -0.79
CCDC33-209ENST00000560565 LRP10Q7Z4F1 713 aa10.14□□□□□ -0.79
CCDC33-209ENST00000560565 NBPF15Q8N660 670 aa10.14□□□□□ -0.79
CCDC33-209ENST00000560565 LINS1Q8NG48 757 aa10.14□□□□□ -0.79
CCDC33-209ENST00000560565 CGNQ9P2M7 1197 aaKnown RBP10.14□□□□□ -0.79
CCDC33-209ENST00000560565 STAP2Q9UGK3 403 aa10.14□□□□□ -0.79
CCDC33-209ENST00000560565 PRDM4Q9UKN5 801 aa10.14□□□□□ -0.79
CCDC33-209ENST00000560565 C10orf71Q711Q0 1435 aa10.14□□□□□ -0.79
CCDC33-209ENST00000560565 CCDC66A2RUB6 948 aa10.13□□□□□ -0.79
CCDC33-209ENST00000560565 CAMTA2O94983 1202 aa10.13□□□□□ -0.79
CCDC33-209ENST00000560565 DPEP1P16444 411 aa10.13□□□□□ -0.79
CCDC33-209ENST00000560565 BEND3Q5T5X7 828 aa10.13□□□□□ -0.79
CCDC33-209ENST00000560565 TBC1D9BQ66K14 1250 aa10.13□□□□□ -0.79
CCDC33-209ENST00000560565 CLEC4GQ6UXB4 293 aa10.13□□□□□ -0.79
CCDC33-209ENST00000560565 ANKRD13DQ6ZTN6 518 aa10.13□□□□□ -0.79
CCDC33-209ENST00000560565 PLBD2Q8NHP8 589 aa10.13□□□□□ -0.79
CCDC33-209ENST00000560565 SETDB2Q96T68 719 aa10.13□□□□□ -0.79
CCDC33-209ENST00000560565 C1orf115Q9H7X2 142 aa10.13□□□□□ -0.79
CCDC33-209ENST00000560565 ZNF652Q9Y2D9 606 aa10.13□□□□□ -0.79
CCDC33-209ENST00000560565 AK9Q5TCS8 1911 aa10.13□□□□□ -0.79
CCDC33-209ENST00000560565 HIP1O00291 1037 aa10.12□□□□□ -0.79
CCDC33-209ENST00000560565 NRDCO43847 1150 aa10.12□□□□□ -0.79
CCDC33-209ENST00000560565 ADCY5O95622 1261 aa10.12□□□□□ -0.79
CCDC33-209ENST00000560565 UBTFL1P0CB47 393 aaPredicted RBP10.12□□□□□ -0.79
CCDC33-209ENST00000560565 ZSCAN22P10073 491 aaPredicted RBP10.12□□□□□ -0.79
CCDC33-209ENST00000560565 MYL6BP14649 208 aa10.12□□□□□ -0.79
CCDC33-209ENST00000560565 PROSER3Q2NL68 480 aa10.12□□□□□ -0.79
CCDC33-209ENST00000560565 COPS6Q7L5N1 327 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms