RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 FAM109BQ6ICB4 259 aaPredicted RBP9.09□□□□□ -0.95
HERC1-208ENST00000560462 UBE2Q1Q7Z7E8 422 aa9.09□□□□□ -0.95
HERC1-208ENST00000560462 FAM161BQ96MY7 647 aa9.09□□□□□ -0.95
HERC1-208ENST00000560462 C1QTNF1Q9BXJ1 281 aa9.09□□□□□ -0.95
HERC1-208ENST00000560462 SLC12A5Q9H2X9 1139 aa9.09□□□□□ -0.95
HERC1-208ENST00000560462 PTCH2Q9Y6C5 1203 aa9.09□□□□□ -0.95
HERC1-208ENST00000560462 AOC3Q16853 763 aa9.08□□□□□ -0.96
HERC1-208ENST00000560462 TDHQ8IZJ6 230 aa9.08□□□□□ -0.96
HERC1-208ENST00000560462 EFCAB3Q8N7B9 438 aa9.08□□□□□ -0.96
HERC1-208ENST00000560462 NFATC2IPQ8NCF5 419 aa9.08□□□□□ -0.96
HERC1-208ENST00000560462 NKX2-3Q8TAU0 364 aa9.08□□□□□ -0.96
HERC1-208ENST00000560462 POTEB2H3BUK9 544 aa9.07□□□□□ -0.96
HERC1-208ENST00000560462 RAD17O75943 681 aa9.07□□□□□ -0.96
HERC1-208ENST00000560462 TBC1D10BQ4KMP7 808 aaPredicted RBP9.07□□□□□ -0.96
HERC1-208ENST00000560462 NBPF5PQ86XG9 351 aaPredicted RBP9.07□□□□□ -0.96
HERC1-208ENST00000560462 PIP4P2Q8N4L2 257 aa9.07□□□□□ -0.96
HERC1-208ENST00000560462 BDP1A6H8Y1 2624 aa9.06□□□□□ -0.96
HERC1-208ENST00000560462 UBE2Q2LH0YL09 131 aa9.06□□□□□ -0.96
HERC1-208ENST00000560462 EIF5P55010 431 aaKnown RBP9.06□□□□□ -0.96
HERC1-208ENST00000560462 MOB2Q70IA6 237 aa9.06□□□□□ -0.96
HERC1-208ENST00000560462 SH3TC2Q8TF17 1288 aa9.06□□□□□ -0.96
HERC1-208ENST00000560462 VPS33BQ9H267 617 aa9.06□□□□□ -0.96
HERC1-208ENST00000560462 TBC1D2BQ9UPU7 963 aa9.06□□□□□ -0.96
HERC1-208ENST00000560462 KIF24Q5T7B8 1368 aa9.06□□□□□ -0.96
HERC1-208ENST00000560462 SCN7AQ01118 1682 aa9.06□□□□□ -0.96
HERC1-208ENST00000560462 EGFRP00533 1210 aa9.05□□□□□ -0.96
HERC1-208ENST00000560462 FXR2P51116 673 aaKnown RBP eCLIP9.05□□□□□ -0.962e-10■■■□□ 16.1
HERC1-208ENST00000560462 SP3Q02447 781 aa9.05□□□□□ -0.96
HERC1-208ENST00000560462 ARHGEF6Q15052 776 aa9.05□□□□□ -0.96
HERC1-208ENST00000560462 IFNL1Q8IU54 200 aa9.05□□□□□ -0.96
HERC1-208ENST00000560462 CDX2Q99626 313 aaPredicted RBP9.05□□□□□ -0.96
HERC1-208ENST00000560462 GGA3Q9NZ52 723 aa9.05□□□□□ -0.96
HERC1-208ENST00000560462 ST20-MTHFSA0A0A6YYL1 179 aa9.04□□□□□ -0.96
HERC1-208ENST00000560462 PRAMEF22A3QJZ6 481 aa9.04□□□□□ -0.96
HERC1-208ENST00000560462 MTHFSP49914 203 aa9.04□□□□□ -0.96
HERC1-208ENST00000560462 MRE11P49959 708 aa9.04□□□□□ -0.96
HERC1-208ENST00000560462 INHBEP58166 350 aa9.04□□□□□ -0.96
HERC1-208ENST00000560462 CAP1Q01518 475 aa9.04□□□□□ -0.96
HERC1-208ENST00000560462 TCIRG1Q13488 830 aa9.04□□□□□ -0.96
HERC1-208ENST00000560462 RBM26Q5T8P6 1007 aaKnown RBP9.04□□□□□ -0.96
HERC1-208ENST00000560462 LARP6Q9BRS8 491 aaKnown RBP9.04□□□□□ -0.96
HERC1-208ENST00000560462 ZNF330Q9Y3S2 320 aaPredicted RBP9.04□□□□□ -0.96
HERC1-208ENST00000560462 FARP2O94887 1054 aaPredicted RBP9.03□□□□□ -0.96
HERC1-208ENST00000560462 GJA8P48165 433 aa9.03□□□□□ -0.96
HERC1-208ENST00000560462 CAMK2BQ13554 666 aa9.03□□□□□ -0.96
HERC1-208ENST00000560462 ZNF697Q5TEC3 545 aa9.03□□□□□ -0.96
HERC1-208ENST00000560462 DPF2Q92785 391 aa9.03□□□□□ -0.96
HERC1-208ENST00000560462 EYA1Q99502 592 aa9.03□□□□□ -0.96
HERC1-208ENST00000560462 CRISPLD2Q9H0B8 497 aa9.03□□□□□ -0.96
HERC1-208ENST00000560462 KDM3BQ7LBC6 1761 aa9.03□□□□□ -0.96
HERC1-208ENST00000560462 MUC6Q6W4X9 2439 aa9.02□□□□□ -0.97
HERC1-208ENST00000560462 CRHR2Q13324 411 aa9.02□□□□□ -0.97
HERC1-208ENST00000560462 TTLL12Q14166 644 aaPredicted RBP9.02□□□□□ -0.97
HERC1-208ENST00000560462 ZNF530Q6P9A1 599 aaPredicted RBP9.02□□□□□ -0.97
HERC1-208ENST00000560462 TPTE2Q6XPS3 522 aa9.02□□□□□ -0.97
HERC1-208ENST00000560462 DDX27Q96GQ7 796 aaKnown RBP9.02□□□□□ -0.97
HERC1-208ENST00000560462 RAB3GAP2Q9H2M9 1393 aa9.01□□□□□ -0.97
HERC1-208ENST00000560462 MANSC4A6NHS7 340 aaPredicted RBP9.01□□□□□ -0.97
HERC1-208ENST00000560462 CAMTA2O94983 1202 aa9.01□□□□□ -0.97
HERC1-208ENST00000560462 FOXK2Q01167 660 aa9.01□□□□□ -0.97
HERC1-208ENST00000560462 MTFR1Q15390 333 aa9.01□□□□□ -0.97
HERC1-208ENST00000560462 PPARGC1BQ86YN6 1023 aaKnown RBP9.01□□□□□ -0.97
HERC1-208ENST00000560462 UBE2OQ9C0C9 1292 aaKnown RBP9.01□□□□□ -0.97
HERC1-208ENST00000560462 IGF2BP3O00425 579 aaKnown RBP eCLIP9□□□□□ -0.97
HERC1-208ENST00000560462 TCERG1O14776 1098 aaKnown RBP9□□□□□ -0.97
HERC1-208ENST00000560462 STARD3NLO95772 234 aa9□□□□□ -0.97
HERC1-208ENST00000560462 GJB1P08034 283 aa9□□□□□ -0.97
HERC1-208ENST00000560462 MAGEA10P43363 369 aaPredicted RBP9□□□□□ -0.97
HERC1-208ENST00000560462 KIF4BQ2VIQ3 1234 aa9□□□□□ -0.97
HERC1-208ENST00000560462 SPRYD7Q5W111 196 aa9□□□□□ -0.97
HERC1-208ENST00000560462 NPM2Q86SE8 214 aaKnown RBP9□□□□□ -0.97
HERC1-208ENST00000560462 SLC51AQ86UW1 340 aa9□□□□□ -0.97
HERC1-208ENST00000560462 SUPT20HQ8NEM7 779 aa9□□□□□ -0.97
HERC1-208ENST00000560462 ADAMTS19Q8TE59 1207 aa9□□□□□ -0.97
HERC1-208ENST00000560462 LRFN3Q9BTN0 628 aa9□□□□□ -0.97
HERC1-208ENST00000560462 TMX4Q9H1E5 349 aaPredicted RBP9□□□□□ -0.97
HERC1-208ENST00000560462 ZMYND8Q9ULU4 1186 aaPredicted RBP9□□□□□ -0.97
HERC1-208ENST00000560462 POLR2AP24928 1970 aaKnown RBP9□□□□□ -0.97
HERC1-208ENST00000560462 ASTN2O75129 1339 aaPredicted RBP9□□□□□ -0.97
HERC1-208ENST00000560462 PKD1L2Q7Z442 2459 aa8.99□□□□□ -0.97
HERC1-208ENST00000560462 CRY2Q49AN0 593 aa8.99□□□□□ -0.97
HERC1-208ENST00000560462 PLEKHO1Q53GL0 409 aaPredicted RBP8.99□□□□□ -0.97
HERC1-208ENST00000560462 C1orf141Q5JVX7 400 aa8.99□□□□□ -0.97
HERC1-208ENST00000560462 ANGEL2Q5VTE6 544 aaKnown RBP8.99□□□□□ -0.97
HERC1-208ENST00000560462 OTUD7BQ6GQQ9 843 aa8.99□□□□□ -0.97
HERC1-208ENST00000560462 MYLIPQ8WY64 445 aa8.99□□□□□ -0.97
HERC1-208ENST00000560462 RPGRQ92834 1020 aaKnown RBP8.99□□□□□ -0.97
HERC1-208ENST00000560462 KIF12Q96FN5 646 aa8.99□□□□□ -0.97
HERC1-208ENST00000560462 UHRF1Q96T88 793 aaPredicted RBP8.99□□□□□ -0.97
HERC1-208ENST00000560462 GGNBP2Q9H3C7 697 aa8.99□□□□□ -0.97
HERC1-208ENST00000560462 PPM1GO15355 546 aaPredicted RBP8.98□□□□□ -0.97
HERC1-208ENST00000560462 FOSL2P15408 326 aa8.98□□□□□ -0.97
HERC1-208ENST00000560462 KIAA2012Q0VF49 1180 aa8.98□□□□□ -0.97
HERC1-208ENST00000560462 NUTM1Q86Y26 1132 aa8.98□□□□□ -0.97
HERC1-208ENST00000560462 C7orf61Q8IZ16 206 aa8.98□□□□□ -0.97
HERC1-208ENST00000560462 EMILIN1Q9Y6C2 1016 aa8.98□□□□□ -0.97
HERC1-208ENST00000560462 ZNF646O15015 1829 aaPredicted RBP8.97□□□□□ -0.97
HERC1-208ENST00000560462 YDJCA8MPS7 323 aa8.97□□□□□ -0.97
HERC1-208ENST00000560462 MAP3K13O43283 966 aa8.97□□□□□ -0.97
HERC1-208ENST00000560462 CCL5P13501 91 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms