RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 GOLGA6L7A0A1B0GV03 622 aa15.44■□□□□ 0.06
TRAF3-208ENST00000560371 CA8P35219 290 aa15.44■□□□□ 0.06
TRAF3-208ENST00000560371 MAGEB6Q8N7X4 407 aa15.44■□□□□ 0.06
TRAF3-208ENST00000560371 BRF1Q92994 677 aa15.44■□□□□ 0.06
TRAF3-208ENST00000560371 EYA1Q99502 592 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 EXOC1Q9NV70 894 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 KIAA0754O94854 1291 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 YEATS4O95619 227 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 PTPN14Q15678 1187 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 CNBD1Q8NA66 436 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 LRRC2Q9BYS8 371 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 TNNI2P48788 182 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 NUCB1Q02818 461 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 PAFAH1B1P43034 410 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 LUZP1Q86V48 1076 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 ANKRD44Q8N8A2 993 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 C6orf50Q9HD87 102 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 KIF2AO00139 706 aaPredicted RBP15.43■□□□□ 0.06
TRAF3-208ENST00000560371 DNA2P51530 1060 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 NAPAP54920 295 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 KIF4BQ2VIQ3 1234 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 SKAP1Q86WV1 359 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 CPLX3Q8WVH0 158 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 GDPD2Q9HCC8 539 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 BMP15O95972 392 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 ATP8B2P98198 1209 aa15.43■□□□□ 0.06
TRAF3-208ENST00000560371 CCNL1Q9UK58 526 aaPredicted RBP15.43■□□□□ 0.06
TRAF3-208ENST00000560371 PDE1AP54750 535 aa15.42■□□□□ 0.06
TRAF3-208ENST00000560371 MAP3K9P80192 1104 aa15.42■□□□□ 0.06
TRAF3-208ENST00000560371 ISM2Q6H9L7 571 aa15.42■□□□□ 0.06
TRAF3-208ENST00000560371 RBM8AQ9Y5S9 174 aaKnown RBP15.42■□□□□ 0.06
TRAF3-208ENST00000560371 SMARCC2Q8TAQ2 1214 aa15.42■□□□□ 0.06
TRAF3-208ENST00000560371 CWF19L2Q2TBE0 894 aaKnown RBP15.42■□□□□ 0.06
TRAF3-208ENST00000560371 PA2G4Q9UQ80 394 aaKnown RBP15.42■□□□□ 0.06
TRAF3-208ENST00000560371 USP37Q86T82 979 aa15.42■□□□□ 0.06
TRAF3-208ENST00000560371 CRACR2AQ9BSW2 395 aa15.42■□□□□ 0.06
TRAF3-208ENST00000560371 STK32BQ9NY57 414 aa15.42■□□□□ 0.06
TRAF3-208ENST00000560371 STAT6P42226 847 aa15.42■□□□□ 0.06
TRAF3-208ENST00000560371 HDAC1Q13547 482 aaPredicted RBP15.42■□□□□ 0.06
TRAF3-208ENST00000560371 TNNT1P13805 278 aa15.42■□□□□ 0.06
TRAF3-208ENST00000560371 NCBP1Q09161 790 aaKnown RBP15.42■□□□□ 0.06
TRAF3-208ENST00000560371 PUS7Q96PZ0 661 aaKnown RBP15.42■□□□□ 0.06
TRAF3-208ENST00000560371 HOXC9P31274 260 aa15.41■□□□□ 0.06
TRAF3-208ENST00000560371 NOP2P46087 812 aaKnown RBP15.41■□□□□ 0.06
TRAF3-208ENST00000560371 RNMTO43148 476 aaKnown RBP15.41■□□□□ 0.06
TRAF3-208ENST00000560371 STX1AQ16623 288 aa15.41■□□□□ 0.06
TRAF3-208ENST00000560371 RBM17Q96I25 401 aaKnown RBP15.41■□□□□ 0.06
TRAF3-208ENST00000560371 YTHDC2Q9H6S0 1430 aaKnown RBP15.41■□□□□ 0.06
TRAF3-208ENST00000560371 MAP3K19Q56UN5 1328 aa15.41■□□□□ 0.06
TRAF3-208ENST00000560371 SYKP43405 635 aa15.41■□□□□ 0.06
TRAF3-208ENST00000560371 KIF18AQ8NI77 898 aa15.41■□□□□ 0.06
TRAF3-208ENST00000560371 CASQ1P31415 396 aa15.41■□□□□ 0.06
TRAF3-208ENST00000560371 CLIP2Q9UDT6 1046 aa15.41■□□□□ 0.06
TRAF3-208ENST00000560371 GJA3Q9Y6H8 435 aa15.41■□□□□ 0.06
TRAF3-208ENST00000560371 IL27Q8NEV9 243 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 ZFYVE9O95405 1425 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 CALML3P27482 149 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 JAG2Q9Y219 1238 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 MIGA1Q8NAN2 632 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 CCDC102AQ96A19 550 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 TBC1D2Q9BYX2 928 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 SSFA2P28290 1259 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 FERMT1Q9BQL6 677 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 ECM2O94769 699 aaPredicted RBP15.4■□□□□ 0.06
TRAF3-208ENST00000560371 CALM1P0DP23 149 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 CALM2P0DP24 149 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 CALM3P0DP25 149 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 DYDC1Q8WWB3 177 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 TCHPQ9BT92 498 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 RMND1Q9NWS8 449 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 CCDC91Q7Z6B0 441 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 MRPL50Q8N5N7 158 aaKnown RBP15.4■□□□□ 0.06
TRAF3-208ENST00000560371 CCDC113Q9H0I3 377 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 MMRN2Q9H8L6 949 aa15.4■□□□□ 0.06
TRAF3-208ENST00000560371 CFAP43Q8NDM7 1665 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 UBE2HP62256 183 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 NECAB1Q8N987 351 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 ABCC2Q92887 1545 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 TRIM47Q96LD4 638 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 RBM27Q9P2N5 1060 aaKnown RBP15.39■□□□□ 0.05
TRAF3-208ENST00000560371 BRPF3Q9ULD4 1205 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 TMCO5BA8MYB1 307 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 PHACTR2O75167 634 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 MAP9Q49MG5 647 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 ZNF790Q6PG37 636 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 Q6ZUG5 572 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 TCEANC2Q96MN5 208 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 RRP36Q96EU6 259 aaKnown RBP15.39■□□□□ 0.05
TRAF3-208ENST00000560371 TAOK3Q9H2K8 898 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 SYNCQ9H7C4 482 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 CCDC172P0C7W6 258 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 GBP3Q9H0R5 595 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 GOPCQ9HD26 462 aa15.39■□□□□ 0.05
TRAF3-208ENST00000560371 IGHDP01880 384 aa15.38■□□□□ 0.05
TRAF3-208ENST00000560371 FAM98CQ17RN3 349 aaKnown RBP15.38■□□□□ 0.05
TRAF3-208ENST00000560371 CCDC66A2RUB6 948 aa15.38■□□□□ 0.05
TRAF3-208ENST00000560371 DDX21Q9NR30 783 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRAF3-208ENST00000560371 FAM89AQ96GI7 184 aa15.38■□□□□ 0.05
TRAF3-208ENST00000560371 ORAI2Q96SN7 254 aa15.38■□□□□ 0.05
TRAF3-208ENST00000560371 BICC1Q9H694 974 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms