RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 KIF20BQ96Q89 1820 aa8.24□□□□□ -1.09
CLPX-206ENST00000560166 SLIT2O94813 1529 aa8.24□□□□□ -1.09
CLPX-206ENST00000560166 SBNO1A3KN83 1393 aa8.24□□□□□ -1.09
CLPX-206ENST00000560166 POM121CA8CG34 1229 aa8.24□□□□□ -1.09
CLPX-206ENST00000560166 VPS72Q15906 364 aa8.24□□□□□ -1.09
CLPX-206ENST00000560166 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
CLPX-206ENST00000560166 SV2AQ7L0J3 742 aa8.24□□□□□ -1.09
CLPX-206ENST00000560166 NME9Q86XW9 330 aa8.24□□□□□ -1.09
CLPX-206ENST00000560166 NGEFQ8N5V2 710 aa8.24□□□□□ -1.09
CLPX-206ENST00000560166 DCAF5Q96JK2 942 aa8.24□□□□□ -1.09
CLPX-206ENST00000560166 CALR3Q96L12 384 aaKnown RBP8.24□□□□□ -1.09
CLPX-206ENST00000560166 FIGNL2A6NMB9 653 aa8.23□□□□□ -1.09
CLPX-206ENST00000560166 PROCP04070 461 aa8.23□□□□□ -1.09
CLPX-206ENST00000560166 ITGA6P23229 1130 aa8.23□□□□□ -1.09
CLPX-206ENST00000560166 MTHFSP49914 203 aa8.23□□□□□ -1.09
CLPX-206ENST00000560166 PSME1Q06323 249 aa8.23□□□□□ -1.09
CLPX-206ENST00000560166 LYPD8Q6UX82 237 aa8.23□□□□□ -1.09
CLPX-206ENST00000560166 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.23□□□□□ -1.09
CLPX-206ENST00000560166 ZNF784Q8NCA9 323 aaPredicted RBP8.23□□□□□ -1.09
CLPX-206ENST00000560166 PMFBP1Q8TBY8 1022 aa8.23□□□□□ -1.09
CLPX-206ENST00000560166 COL3A1P02461 1466 aaPredicted RBP8.22□□□□□ -1.09
CLPX-206ENST00000560166 ZBTB7CA1YPR0 619 aa8.22□□□□□ -1.09
CLPX-206ENST00000560166 C1QTNF8P60827 252 aa8.22□□□□□ -1.09
CLPX-206ENST00000560166 WDR43Q15061 677 aaKnown RBP eCLIP8.22□□□□□ -1.09
CLPX-206ENST00000560166 TSC1Q92574 1164 aa8.22□□□□□ -1.09
CLPX-206ENST00000560166 GLMNQ92990 594 aa8.22□□□□□ -1.09
CLPX-206ENST00000560166 RGPD1P0DJD0 1748 aa8.22□□□□□ -1.09
CLPX-206ENST00000560166 USP19O94966 1318 aa8.22□□□□□ -1.09
CLPX-206ENST00000560166 RTL1A6NKG5 1358 aa8.22□□□□□ -1.09
CLPX-206ENST00000560166 ARHGEF10O15013 1369 aa8.22□□□□□ -1.09
CLPX-206ENST00000560166 PXDNQ92626 1479 aa8.21□□□□□ -1.09
CLPX-206ENST00000560166 CTHP32929 405 aa8.21□□□□□ -1.1
CLPX-206ENST00000560166 CTDSPL2Q05D32 466 aa8.21□□□□□ -1.1
CLPX-206ENST00000560166 FAM9BQ8IZU0 186 aa8.21□□□□□ -1.1
CLPX-206ENST00000560166 KCNH5Q8NCM2 988 aa8.21□□□□□ -1.1
CLPX-206ENST00000560166 SPON1Q9HCB6 807 aa8.21□□□□□ -1.1
CLPX-206ENST00000560166 HMX1Q9NP08 348 aaPredicted RBP8.21□□□□□ -1.1
CLPX-206ENST00000560166 POLKQ9UBT6 870 aa8.21□□□□□ -1.1
CLPX-206ENST00000560166 NUDCQ9Y266 331 aa8.21□□□□□ -1.1
CLPX-206ENST00000560166 NDUFB9Q9Y6M9 179 aa8.21□□□□□ -1.1
CLPX-206ENST00000560166 ZBED9Q6R2W3 1325 aa8.21□□□□□ -1.1
CLPX-206ENST00000560166 PIK3C2AO00443 1686 aa8.21□□□□□ -1.1
CLPX-206ENST00000560166 SLIT3O75094 1523 aa8.2□□□□□ -1.1
CLPX-206ENST00000560166 CELA2BP08218 269 aaPredicted RBP8.2□□□□□ -1.1
CLPX-206ENST00000560166 MAP3K10Q02779 954 aa8.2□□□□□ -1.1
CLPX-206ENST00000560166 SRSF11Q05519 484 aaKnown RBP8.2□□□□□ -1.1
CLPX-206ENST00000560166 MTMR2Q13614 643 aa8.2□□□□□ -1.1
CLPX-206ENST00000560166 CNGB1Q14028 1251 aaPredicted RBP8.2□□□□□ -1.1
CLPX-206ENST00000560166 NBPF14Q5TI25 921 aa8.2□□□□□ -1.1
CLPX-206ENST00000560166 KRT28Q7Z3Y7 464 aa8.2□□□□□ -1.1
CLPX-206ENST00000560166 BPHLQ86WA6 291 aaPredicted RBP8.2□□□□□ -1.1
CLPX-206ENST00000560166 Q8N3U1 123 aa8.2□□□□□ -1.1
CLPX-206ENST00000560166 EMILIN1Q9Y6C2 1016 aa8.2□□□□□ -1.1
CLPX-206ENST00000560166 TNS3Q68CZ2 1445 aa8.2□□□□□ -1.1
CLPX-206ENST00000560166 CAMTA1Q9Y6Y1 1673 aa8.19□□□□□ -1.1
CLPX-206ENST00000560166 PHF20L1A8MW92 1017 aa8.19□□□□□ -1.1
CLPX-206ENST00000560166 SPINT1O43278 529 aa8.19□□□□□ -1.1
CLPX-206ENST00000560166 KCNQ2O43526 872 aa8.19□□□□□ -1.1
CLPX-206ENST00000560166 TRIM37O94972 964 aa8.19□□□□□ -1.1
CLPX-206ENST00000560166 APBA3O96018 575 aa8.19□□□□□ -1.1
CLPX-206ENST00000560166 F12P00748 615 aaPredicted RBP8.19□□□□□ -1.1
CLPX-206ENST00000560166 TNNT2P45379 298 aaPredicted RBP8.19□□□□□ -1.1
CLPX-206ENST00000560166 ABTB2Q8N961 1025 aa8.19□□□□□ -1.1
CLPX-206ENST00000560166 PNNQ9H307 717 aaKnown RBP8.19□□□□□ -1.1
CLPX-206ENST00000560166 MAP4K5Q9Y4K4 846 aa8.19□□□□□ -1.1
CLPX-206ENST00000560166 TRPM3Q9HCF6 1732 aaPredicted RBP8.19□□□□□ -1.1
CLPX-206ENST00000560166 FLT4P35916 1363 aa8.19□□□□□ -1.1
CLPX-206ENST00000560166 ABCC6O95255 1503 aa8.19□□□□□ -1.1
CLPX-206ENST00000560166 PLCH1Q4KWH8 1693 aa8.18□□□□□ -1.1
CLPX-206ENST00000560166 RGPD8O14715 1765 aaPredicted RBP8.18□□□□□ -1.1
CLPX-206ENST00000560166 CDC14CA4D256 554 aa8.18□□□□□ -1.1
CLPX-206ENST00000560166 K7ELQ4 463 aaPredicted RBP8.18□□□□□ -1.1
CLPX-206ENST00000560166 DIAPH1O60610 1272 aaKnown RBP8.18□□□□□ -1.1
CLPX-206ENST00000560166 HNRNPUQ00839 825 aaKnown RBP eCLIP8.18□□□□□ -1.1
CLPX-206ENST00000560166 IRF5Q13568 498 aa8.18□□□□□ -1.1
CLPX-206ENST00000560166 RETREG2Q8NC44 543 aa8.18□□□□□ -1.1
CLPX-206ENST00000560166 HELBQ8NG08 1087 aaPredicted RBP8.18□□□□□ -1.1
CLPX-206ENST00000560166 YTHDC1Q96MU7 727 aaKnown RBP8.18□□□□□ -1.1
CLPX-206ENST00000560166 CAMKK2Q96RR4 588 aa8.18□□□□□ -1.1
CLPX-206ENST00000560166 TRAIPQ9BWF2 469 aa8.18□□□□□ -1.1
CLPX-206ENST00000560166 C1QTNF2Q9BXJ5 285 aa8.18□□□□□ -1.1
CLPX-206ENST00000560166 ENAMQ9NRM1 1142 aa8.18□□□□□ -1.1
CLPX-206ENST00000560166 SPATA31A3Q5VYP0 1347 aa8.18□□□□□ -1.1
CLPX-206ENST00000560166 NFAT5O94916 1531 aa8.18□□□□□ -1.1
CLPX-206ENST00000560166 PHRF1Q9P1Y6 1649 aaKnown RBP8.18□□□□□ -1.1
CLPX-206ENST00000560166 CFAP99D6REC4 459 aa8.17□□□□□ -1.1
CLPX-206ENST00000560166 PDE3BQ13370 1112 aa8.17□□□□□ -1.1
CLPX-206ENST00000560166 Q6ZVU0 165 aa8.17□□□□□ -1.1
CLPX-206ENST00000560166 LRRN4Q8WUT4 740 aa8.17□□□□□ -1.1
CLPX-206ENST00000560166 TRIM34Q9BYJ4 488 aa8.17□□□□□ -1.1
CLPX-206ENST00000560166 CNTNAP5Q8WYK1 1306 aa8.17□□□□□ -1.1
CLPX-206ENST00000560166 DISP2A7MBM2 1401 aa8.17□□□□□ -1.1
CLPX-206ENST00000560166 ALS2Q96Q42 1657 aa8.17□□□□□ -1.1
CLPX-206ENST00000560166 GIGYF1O75420 1035 aaPredicted RBP8.16□□□□□ -1.1
CLPX-206ENST00000560166 IL13P35225 146 aa8.16□□□□□ -1.1
CLPX-206ENST00000560166 AGERQ15109 404 aa8.16□□□□□ -1.1
CLPX-206ENST00000560166 MAP3K19Q56UN5 1328 aa8.16□□□□□ -1.1
CLPX-206ENST00000560166 HDGFL1Q5TGJ6 251 aa8.16□□□□□ -1.1
CLPX-206ENST00000560166 BEND7Q8N7W2 519 aaPredicted RBP8.16□□□□□ -1.1
CLPX-206ENST00000560166 TNS1Q9HBL0 1735 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms