RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 USP17L22D6RA61 530 aa9.25□□□□□ -0.93
CRNDE-208ENST00000560029 USP17L17D6RBQ6 530 aa9.25□□□□□ -0.93
CRNDE-208ENST00000560029 USP17L19D6RCP7 530 aa9.25□□□□□ -0.93
CRNDE-208ENST00000560029 USP17L20D6RJB6 530 aa9.25□□□□□ -0.93
CRNDE-208ENST00000560029 GLB1P16278 677 aa9.25□□□□□ -0.93
CRNDE-208ENST00000560029 USP17L24Q0WX57 530 aa9.25□□□□□ -0.93
CRNDE-208ENST00000560029 LRFN2Q9ULH4 789 aa9.25□□□□□ -0.93
CRNDE-208ENST00000560029 FAM196BA6NMK8 535 aa9.24□□□□□ -0.93
CRNDE-208ENST00000560029 MMP20O60882 483 aa9.24□□□□□ -0.93
CRNDE-208ENST00000560029 ARID4AP29374 1257 aaPredicted RBP9.24□□□□□ -0.93
CRNDE-208ENST00000560029 SETDB1Q15047 1291 aa9.24□□□□□ -0.93
CRNDE-208ENST00000560029 TMEM130Q8N3G9 435 aa9.24□□□□□ -0.93
CRNDE-208ENST00000560029 VTI1AQ96AJ9 217 aa9.24□□□□□ -0.93
CRNDE-208ENST00000560029 NOVA2Q9UNW9 492 aaKnown RBP9.24□□□□□ -0.93
CRNDE-208ENST00000560029 TRIM33Q9UPN9 1127 aa9.24□□□□□ -0.93
CRNDE-208ENST00000560029 GHRHP01286 108 aa9.23□□□□□ -0.93
CRNDE-208ENST00000560029 TREML1Q86YW5 311 aa9.23□□□□□ -0.93
CRNDE-208ENST00000560029 ZMIZ1Q9ULJ6 1067 aa9.23□□□□□ -0.93
CRNDE-208ENST00000560029 COL17A1Q9UMD9 1497 aaPredicted RBP9.22□□□□□ -0.93
CRNDE-208ENST00000560029 CARNS1A5YM72 827 aa9.22□□□□□ -0.93
CRNDE-208ENST00000560029 PSAPP07602 524 aa9.22□□□□□ -0.93
CRNDE-208ENST00000560029 WEE1P30291 646 aa9.22□□□□□ -0.93
CRNDE-208ENST00000560029 CD97P48960 835 aa9.22□□□□□ -0.93
CRNDE-208ENST00000560029 UBL7Q96S82 380 aaPredicted RBP9.22□□□□□ -0.93
CRNDE-208ENST00000560029 TGFB1P01137 390 aa9.21□□□□□ -0.94
CRNDE-208ENST00000560029 STK32AQ8WU08 396 aa9.21□□□□□ -0.94
CRNDE-208ENST00000560029 C11orf16Q9NQ32 467 aa9.21□□□□□ -0.94
CRNDE-208ENST00000560029 KCNMB2Q9Y691 235 aa9.21□□□□□ -0.94
CRNDE-208ENST00000560029 EGFRP00533 1210 aa9.2□□□□□ -0.94
CRNDE-208ENST00000560029 ELOAQ14241 798 aaKnown RBP9.2□□□□□ -0.94
CRNDE-208ENST00000560029 TMEM164Q5U3C3 297 aa9.2□□□□□ -0.94
CRNDE-208ENST00000560029 MYO19Q96H55 970 aa9.2□□□□□ -0.94
CRNDE-208ENST00000560029 RAXQ9Y2V3 346 aa9.2□□□□□ -0.94
CRNDE-208ENST00000560029 PAX4O43316 350 aa9.19□□□□□ -0.94
CRNDE-208ENST00000560029 FOXO3O43524 673 aa9.19□□□□□ -0.94
CRNDE-208ENST00000560029 PTCD1O75127 700 aaKnown RBP9.19□□□□□ -0.94
CRNDE-208ENST00000560029 CDC25BP30305 580 aa9.19□□□□□ -0.94
CRNDE-208ENST00000560029 TXNDC11Q6PKC3 985 aa9.19□□□□□ -0.94
CRNDE-208ENST00000560029 GALNT11Q8NCW6 608 aa9.19□□□□□ -0.94
CRNDE-208ENST00000560029 FAM200AQ8TCP9 573 aa9.19□□□□□ -0.94
CRNDE-208ENST00000560029 STOML1Q9UBI4 398 aa9.19□□□□□ -0.94
CRNDE-208ENST00000560029 OAS3Q9Y6K5 1087 aaKnown RBP9.19□□□□□ -0.94
CRNDE-208ENST00000560029 LINC01387J3KSC0 135 aa9.18□□□□□ -0.94
CRNDE-208ENST00000560029 WISP1O95388 367 aa9.18□□□□□ -0.94
CRNDE-208ENST00000560029 IGLV1-40P01703 118 aa9.18□□□□□ -0.94
CRNDE-208ENST00000560029 IRAK1P51617 712 aa9.18□□□□□ -0.94
CRNDE-208ENST00000560029 KRTAP4-8A0A0G2JLE6 195 aa9.17□□□□□ -0.94
CRNDE-208ENST00000560029 COX20Q5RI15 118 aa9.17□□□□□ -0.94
CRNDE-208ENST00000560029 Q6ZS46 218 aa9.17□□□□□ -0.94
CRNDE-208ENST00000560029 SLC51AQ86UW1 340 aa9.17□□□□□ -0.94
CRNDE-208ENST00000560029 RBSNQ9H1K0 784 aa9.17□□□□□ -0.94
CRNDE-208ENST00000560029 KCNK4Q9NYG8 393 aa9.17□□□□□ -0.94
CRNDE-208ENST00000560029 TMEM88BA6NKF7 163 aa9.16□□□□□ -0.94
CRNDE-208ENST00000560029 ADAMTS4O75173 837 aa9.16□□□□□ -0.94
CRNDE-208ENST00000560029 PDIA4P13667 645 aaKnown RBP9.16□□□□□ -0.94
CRNDE-208ENST00000560029 TAL1P17542 331 aaPredicted RBP9.16□□□□□ -0.94
CRNDE-208ENST00000560029 COL13A1Q5TAT6 717 aaPredicted RBP9.16□□□□□ -0.94
CRNDE-208ENST00000560029 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.16□□□□□ -0.94
CRNDE-208ENST00000560029 LACRTQ9GZZ8 138 aa9.16□□□□□ -0.94
CRNDE-208ENST00000560029 PPME1Q9Y570 386 aa9.16□□□□□ -0.94
CRNDE-208ENST00000560029 COBLO75128 1261 aa9.15□□□□□ -0.94
CRNDE-208ENST00000560029 GP2P55259 537 aaKnown RBP9.15□□□□□ -0.94
CRNDE-208ENST00000560029 ATP11AP98196 1134 aa9.15□□□□□ -0.94
CRNDE-208ENST00000560029 TRIP4Q15650 581 aaPredicted RBP9.15□□□□□ -0.94
CRNDE-208ENST00000560029 ARMC10Q8N2F6 343 aa9.15□□□□□ -0.94
CRNDE-208ENST00000560029 PRIMPOLQ96LW4 560 aa9.15□□□□□ -0.94
CRNDE-208ENST00000560029 USTQ9Y2C2 406 aa9.15□□□□□ -0.94
CRNDE-208ENST00000560029 FKBP5Q13451 457 aaPredicted RBP9.14□□□□□ -0.95
CRNDE-208ENST00000560029 FAM26DQ5JW98 314 aa9.14□□□□□ -0.95
CRNDE-208ENST00000560029 ADAMTSL4Q6UY14 1074 aa9.14□□□□□ -0.95
CRNDE-208ENST00000560029 ACAD11Q709F0 780 aa9.14□□□□□ -0.95
CRNDE-208ENST00000560029 ETFBKMTQ8IXQ9 262 aa9.14□□□□□ -0.95
CRNDE-208ENST00000560029 CARD10Q9BWT7 1032 aa9.14□□□□□ -0.95
CRNDE-208ENST00000560029 SAP130Q9H0E3 1048 aa9.14□□□□□ -0.95
CRNDE-208ENST00000560029 SRA1Q9HD15 236 aaKnown RBP9.14□□□□□ -0.95
CRNDE-208ENST00000560029 DHX15O43143 795 aaKnown RBP9.13□□□□□ -0.95
CRNDE-208ENST00000560029 NLRP13Q86W25 1043 aa9.13□□□□□ -0.95
CRNDE-208ENST00000560029 MAP4K3Q8IVH8 894 aa9.13□□□□□ -0.95
CRNDE-208ENST00000560029 CD68P34810 354 aaPredicted RBP9.12□□□□□ -0.95
CRNDE-208ENST00000560029 SOX18P35713 384 aa9.12□□□□□ -0.95
CRNDE-208ENST00000560029 TXKP42681 527 aa9.12□□□□□ -0.95
CRNDE-208ENST00000560029 FAM69CQ0P6D2 419 aa9.12□□□□□ -0.95
CRNDE-208ENST00000560029 CEP135Q66GS9 1140 aa9.12□□□□□ -0.95
CRNDE-208ENST00000560029 ZDHHC13Q8IUH4 622 aa9.12□□□□□ -0.95
CRNDE-208ENST00000560029 TRIM42Q8IWZ5 723 aa9.12□□□□□ -0.95
CRNDE-208ENST00000560029 TRAIPQ9BWF2 469 aa9.12□□□□□ -0.95
CRNDE-208ENST00000560029 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.12□□□□□ -0.95
CRNDE-208ENST00000560029 HMX2A2RU54 273 aa9.11□□□□□ -0.95
CRNDE-208ENST00000560029 KIAA1324LA8MWY0 1029 aaPredicted RBP9.11□□□□□ -0.95
CRNDE-208ENST00000560029 DDX3YO15523 660 aaKnown RBP9.11□□□□□ -0.95
CRNDE-208ENST00000560029 HOXD8P13378 290 aaPredicted RBP9.11□□□□□ -0.95
CRNDE-208ENST00000560029 PDE4CQ08493 712 aa9.11□□□□□ -0.95
CRNDE-208ENST00000560029 FMNL2Q96PY5 1086 aa9.11□□□□□ -0.95
CRNDE-208ENST00000560029 C7orf69Q9H7B7 122 aa9.11□□□□□ -0.95
CRNDE-208ENST00000560029 UBAP1LF5GYI3 381 aa9.1□□□□□ -0.95
CRNDE-208ENST00000560029 GSC2O15499 205 aa9.1□□□□□ -0.95
CRNDE-208ENST00000560029 NFIAQ12857 509 aa9.1□□□□□ -0.95
CRNDE-208ENST00000560029 UTP4Q969X6 686 aaKnown RBP9.1□□□□□ -0.95
CRNDE-208ENST00000560029 SLAIN2Q9P270 581 aa9.1□□□□□ -0.95
CRNDE-208ENST00000560029 PRMT3O60678 531 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms