RNA–Protein interactions for RNA: ENST00000558941.5

PCAT29-202, prostate cancer associated transcript 29, humanhuman

TSL 4 BASIC

Gene PCAT29, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-202ENST00000558941 GRIPAP1Q4V328 841 aa10.49□□□□□ -0.73
PCAT29-202ENST00000558941 ANGEL2Q5VTE6 544 aaKnown RBP10.49□□□□□ -0.73
PCAT29-202ENST00000558941 P2RX7Q99572 595 aaKnown RBP10.49□□□□□ -0.73
PCAT29-202ENST00000558941 KIF7Q2M1P5 1343 aa10.49□□□□□ -0.73
PCAT29-202ENST00000558941 RTL9Q8NET4 1388 aa10.49□□□□□ -0.73
PCAT29-202ENST00000558941 DNAH12Q6ZR08 3092 aa10.49□□□□□ -0.73
PCAT29-202ENST00000558941 DDX60Q8IY21 1712 aaKnown RBP10.48□□□□□ -0.73
PCAT29-202ENST00000558941 FAM177BA6PVY3 158 aa10.48□□□□□ -0.73
PCAT29-202ENST00000558941 ECM2O94769 699 aaPredicted RBP10.48□□□□□ -0.73
PCAT29-202ENST00000558941 FARP2O94887 1054 aaPredicted RBP10.48□□□□□ -0.73
PCAT29-202ENST00000558941 MAGEA10P43363 369 aaPredicted RBP10.48□□□□□ -0.73
PCAT29-202ENST00000558941 AMOTQ4VCS5 1084 aa10.48□□□□□ -0.73
PCAT29-202ENST00000558941 PLEKHO1Q53GL0 409 aaPredicted RBP10.48□□□□□ -0.73
PCAT29-202ENST00000558941 CNKSR2Q8WXI2 1034 aa10.48□□□□□ -0.73
PCAT29-202ENST00000558941 LGR6Q9HBX8 967 aa10.48□□□□□ -0.73
PCAT29-202ENST00000558941 ZMYND8Q9ULU4 1186 aaPredicted RBP10.48□□□□□ -0.73
PCAT29-202ENST00000558941 PPM1GO15355 546 aaPredicted RBP10.47□□□□□ -0.73
PCAT29-202ENST00000558941 C3orf67Q6ZVT6 689 aa10.47□□□□□ -0.73
PCAT29-202ENST00000558941 MYLIPQ8WY64 445 aa10.47□□□□□ -0.73
PCAT29-202ENST00000558941 LRFN3Q9BTN0 628 aa10.47□□□□□ -0.73
PCAT29-202ENST00000558941 ARHGAP39Q9C0H5 1083 aa10.47□□□□□ -0.73
PCAT29-202ENST00000558941 KCNQ5Q9NR82 932 aa10.47□□□□□ -0.73
PCAT29-202ENST00000558941 LRRC37AA6NMS7 1700 aa10.47□□□□□ -0.73
PCAT29-202ENST00000558941 A1BGP04217 495 aa10.46□□□□□ -0.73
PCAT29-202ENST00000558941 GJB1P08034 283 aa10.46□□□□□ -0.73
PCAT29-202ENST00000558941 MRE11P49959 708 aa10.46□□□□□ -0.73
PCAT29-202ENST00000558941 TPTE2Q6XPS3 522 aa10.46□□□□□ -0.73
PCAT29-202ENST00000558941 DZIP3Q86Y13 1208 aaKnown RBP10.46□□□□□ -0.73
PCAT29-202ENST00000558941 PTPN18Q99952 460 aa10.46□□□□□ -0.73
PCAT29-202ENST00000558941 HCN4Q9Y3Q4 1203 aa10.46□□□□□ -0.73
PCAT29-202ENST00000558941 SIPA1L3O60292 1781 aaPredicted RBP10.46□□□□□ -0.74
PCAT29-202ENST00000558941 LAMB2P55268 1798 aa10.46□□□□□ -0.74
PCAT29-202ENST00000558941 DCHS1Q96JQ0 3298 aa10.45□□□□□ -0.74
PCAT29-202ENST00000558941 PSME4Q14997 1843 aa10.45□□□□□ -0.74
PCAT29-202ENST00000558941 MANSC4A6NHS7 340 aaPredicted RBP10.45□□□□□ -0.74
PCAT29-202ENST00000558941 SYN1P17600 705 aa10.45□□□□□ -0.74
PCAT29-202ENST00000558941 EIF4G2P78344 907 aaKnown RBP eCLIP10.45□□□□□ -0.74
PCAT29-202ENST00000558941 LDLRAD1Q5T700 205 aa10.45□□□□□ -0.74
PCAT29-202ENST00000558941 NUTM1Q86Y26 1132 aa10.45□□□□□ -0.74
PCAT29-202ENST00000558941 AEBP1Q8IUX7 1158 aa10.45□□□□□ -0.74
PCAT29-202ENST00000558941 FZD1Q9UP38 647 aa10.45□□□□□ -0.74
PCAT29-202ENST00000558941 STARD3NLO95772 234 aa10.44□□□□□ -0.74
PCAT29-202ENST00000558941 PIP4K2AP48426 406 aaPredicted RBP10.44□□□□□ -0.74
PCAT29-202ENST00000558941 SCARF1Q14162 830 aa10.44□□□□□ -0.74
PCAT29-202ENST00000558941 C1orf141Q5JVX7 400 aa10.44□□□□□ -0.74
PCAT29-202ENST00000558941 CLEC4GQ6UXB4 293 aa10.44□□□□□ -0.74
PCAT29-202ENST00000558941 PIAS4Q8N2W9 510 aaPredicted RBP10.44□□□□□ -0.74
PCAT29-202ENST00000558941 NKX2-3Q8TAU0 364 aa10.44□□□□□ -0.74
PCAT29-202ENST00000558941 ZNF496Q96IT1 587 aaPredicted RBP10.44□□□□□ -0.74
PCAT29-202ENST00000558941 CRAMP1Q96RY5 1269 aa10.44□□□□□ -0.74
PCAT29-202ENST00000558941 ATP6V0A2Q9Y487 856 aa10.44□□□□□ -0.74
PCAT29-202ENST00000558941 CCL5P13501 91 aa10.43□□□□□ -0.74
PCAT29-202ENST00000558941 GJA5P36382 358 aa10.43□□□□□ -0.74
PCAT29-202ENST00000558941 C7orf61Q8IZ16 206 aa10.43□□□□□ -0.74
PCAT29-202ENST00000558941 ADAMTS19Q8TE59 1207 aa10.43□□□□□ -0.74
PCAT29-202ENST00000558941 U2AF1L4Q8WU68 220 aaKnown RBP10.43□□□□□ -0.74
PCAT29-202ENST00000558941 PANK3Q9H999 370 aa10.43□□□□□ -0.74
PCAT29-202ENST00000558941 NIP7Q9Y221 180 aaKnown RBP eCLIP10.43□□□□□ -0.74
PCAT29-202ENST00000558941 OTOFQ9HC10 1997 aa10.43□□□□□ -0.74
PCAT29-202ENST00000558941 HEG1Q9ULI3 1381 aa10.42□□□□□ -0.74
PCAT29-202ENST00000558941 RPS12P25398 132 aaKnown RBP10.42□□□□□ -0.74
PCAT29-202ENST00000558941 INHBEP58166 350 aa10.42□□□□□ -0.74
PCAT29-202ENST00000558941 C1QTNF1Q9BXJ1 281 aa10.42□□□□□ -0.74
PCAT29-202ENST00000558941 UBE2OQ9C0C9 1292 aaKnown RBP10.42□□□□□ -0.74
PCAT29-202ENST00000558941 TTYH1Q9H313 450 aaPredicted RBP10.42□□□□□ -0.74
PCAT29-202ENST00000558941 SEMA6BQ9H3T3 888 aa10.42□□□□□ -0.74
PCAT29-202ENST00000558941 NUP98P52948 1817 aa10.42□□□□□ -0.74
PCAT29-202ENST00000558941 COL3A1P02461 1466 aaPredicted RBP10.42□□□□□ -0.74
PCAT29-202ENST00000558941 CTGFP29279 349 aa10.41□□□□□ -0.74
PCAT29-202ENST00000558941 TTLL12Q14166 644 aaPredicted RBP10.41□□□□□ -0.74
PCAT29-202ENST00000558941 ZNF697Q5TEC3 545 aa10.41□□□□□ -0.74
PCAT29-202ENST00000558941 SUPT20HQ8NEM7 779 aa10.41□□□□□ -0.74
PCAT29-202ENST00000558941 DIS3LQ8TF46 1054 aaKnown RBP10.41□□□□□ -0.74
PCAT29-202ENST00000558941 RPGRQ92834 1020 aaKnown RBP10.41□□□□□ -0.74
PCAT29-202ENST00000558941 WNK4Q96J92 1243 aa10.41□□□□□ -0.74
PCAT29-202ENST00000558941 CLMNQ96JQ2 1002 aa10.41□□□□□ -0.74
PCAT29-202ENST00000558941 COL4A1P02462 1669 aa10.41□□□□□ -0.74
PCAT29-202ENST00000558941 BAHCC1Q9P281 2608 aa10.4□□□□□ -0.74
PCAT29-202ENST00000558941 TCF20Q9UGU0 1960 aaKnown RBP10.4□□□□□ -0.74
PCAT29-202ENST00000558941 RNMTO43148 476 aaKnown RBP10.4□□□□□ -0.74
PCAT29-202ENST00000558941 ZNF280AP59817 542 aaPredicted RBP10.4□□□□□ -0.74
PCAT29-202ENST00000558941 TCIRG1Q13488 830 aa10.4□□□□□ -0.74
PCAT29-202ENST00000558941 PRKG1Q13976 671 aa10.4□□□□□ -0.74
PCAT29-202ENST00000558941 HLFQ16534 295 aa10.4□□□□□ -0.74
PCAT29-202ENST00000558941 DPP8Q6V1X1 898 aaPredicted RBP10.4□□□□□ -0.74
PCAT29-202ENST00000558941 UHRF1Q96T88 793 aaPredicted RBP10.4□□□□□ -0.74
PCAT29-202ENST00000558941 DBNDD1Q9H9R9 158 aa10.4□□□□□ -0.74
PCAT29-202ENST00000558941 C11orf16Q9NQ32 467 aa10.4□□□□□ -0.74
PCAT29-202ENST00000558941 ABCC4O15439 1325 aa10.39□□□□□ -0.75
PCAT29-202ENST00000558941 TESPA1A2RU30 521 aaPredicted RBP10.39□□□□□ -0.75
PCAT29-202ENST00000558941 ZBTB48P10074 688 aaPredicted RBP10.39□□□□□ -0.75
PCAT29-202ENST00000558941 HSPA5P11021 654 aaKnown RBP10.39□□□□□ -0.75
PCAT29-202ENST00000558941 FOSL2P15408 326 aa10.39□□□□□ -0.75
PCAT29-202ENST00000558941 IL13P35225 146 aa10.39□□□□□ -0.75
PCAT29-202ENST00000558941 TNNT2P45379 298 aaPredicted RBP10.39□□□□□ -0.75
PCAT29-202ENST00000558941 MORC1Q86VD1 984 aa10.39□□□□□ -0.75
PCAT29-202ENST00000558941 NECAB3Q96P71 396 aaPredicted RBP10.39□□□□□ -0.75
PCAT29-202ENST00000558941 RNF208Q9H0X6 261 aa10.39□□□□□ -0.75
PCAT29-202ENST00000558941 ANKRD36CQ5JPF3 1778 aa10.39□□□□□ -0.75
PCAT29-202ENST00000558941 PKD1L2Q7Z442 2459 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms