RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 KIF4BQ2VIQ3 1234 aa8.97□□□□□ -0.97
LRRC28-207ENST00000558500 DDX46Q7L014 1031 aaKnown RBP8.97□□□□□ -0.97
LRRC28-207ENST00000558500 TMC4Q7Z404 712 aa8.97□□□□□ -0.97
LRRC28-207ENST00000558500 PNISRQ8TF01 805 aaKnown RBP8.97□□□□□ -0.97
LRRC28-207ENST00000558500 DBNDD1Q9H9R9 158 aa8.97□□□□□ -0.97
LRRC28-207ENST00000558500 ASTN2O75129 1339 aaPredicted RBP8.97□□□□□ -0.97
LRRC28-207ENST00000558500 RTL9Q8NET4 1388 aa8.97□□□□□ -0.97
LRRC28-207ENST00000558500 GPR25O00155 361 aa8.96□□□□□ -0.98
LRRC28-207ENST00000558500 ECM2O94769 699 aaPredicted RBP8.96□□□□□ -0.98
LRRC28-207ENST00000558500 U2AF1L5P0DN76 240 aaPredicted RBP8.96□□□□□ -0.98
LRRC28-207ENST00000558500 U2AF1Q01081 240 aaKnown RBP eCLIP8.96□□□□□ -0.98
LRRC28-207ENST00000558500 CNGB1Q14028 1251 aaPredicted RBP8.96□□□□□ -0.98
LRRC28-207ENST00000558500 NOM1Q5C9Z4 860 aaKnown RBP8.96□□□□□ -0.98
LRRC28-207ENST00000558500 LRP10Q7Z4F1 713 aa8.96□□□□□ -0.98
LRRC28-207ENST00000558500 CFAP53Q96M91 514 aa8.96□□□□□ -0.98
LRRC28-207ENST00000558500 KCNQ5Q9NR82 932 aa8.96□□□□□ -0.98
LRRC28-207ENST00000558500 NUDCQ9Y266 331 aa8.96□□□□□ -0.98
LRRC28-207ENST00000558500 ERBB4Q15303 1308 aa8.96□□□□□ -0.98
LRRC28-207ENST00000558500 DUOX1Q9NRD9 1551 aa8.95□□□□□ -0.98
LRRC28-207ENST00000558500 RIMBP2O15034 1052 aa8.95□□□□□ -0.98
LRRC28-207ENST00000558500 ECE2O60344 883 aa8.95□□□□□ -0.98
LRRC28-207ENST00000558500 FXR1P51114 621 aaKnown RBP eCLIP8.95□□□□□ -0.98
LRRC28-207ENST00000558500 ANGEL2Q5VTE6 544 aaKnown RBP8.95□□□□□ -0.98
LRRC28-207ENST00000558500 NLRP10Q86W26 655 aa8.95□□□□□ -0.98
LRRC28-207ENST00000558500 NSFL1CQ9UNZ2 370 aaKnown RBP8.95□□□□□ -0.98
LRRC28-207ENST00000558500 CLSPNQ9HAW4 1339 aa8.95□□□□□ -0.98
LRRC28-207ENST00000558500 C19orf67A6NJJ6 358 aa8.94□□□□□ -0.98
LRRC28-207ENST00000558500 C6orf229H3BNL8 230 aa8.94□□□□□ -0.98
LRRC28-207ENST00000558500 FKTNO75072 461 aa8.94□□□□□ -0.98
LRRC28-207ENST00000558500 VIL1P09327 827 aaKnown RBP8.94□□□□□ -0.98
LRRC28-207ENST00000558500 TM4SF4P48230 202 aa8.94□□□□□ -0.98
LRRC28-207ENST00000558500 ZNF280AP59817 542 aaPredicted RBP8.94□□□□□ -0.98
LRRC28-207ENST00000558500 SCARF1Q14162 830 aa8.94□□□□□ -0.98
LRRC28-207ENST00000558500 PDIA6Q15084 440 aa8.94□□□□□ -0.98
LRRC28-207ENST00000558500 DOK7Q18PE1 504 aa8.94□□□□□ -0.98
LRRC28-207ENST00000558500 MOB2Q70IA6 237 aa8.94□□□□□ -0.98
LRRC28-207ENST00000558500 THUMPD2Q9BTF0 503 aaKnown RBP8.94□□□□□ -0.98
LRRC28-207ENST00000558500 CFHR5Q9BXR6 569 aa8.94□□□□□ -0.98
LRRC28-207ENST00000558500 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.94□□□□□ -0.98
LRRC28-207ENST00000558500 POLLQ9UGP5 575 aa8.94□□□□□ -0.98
LRRC28-207ENST00000558500 TRMT112Q9UI30 125 aaKnown RBP8.94□□□□□ -0.98
LRRC28-207ENST00000558500 SH3TC1Q8TE82 1336 aa8.94□□□□□ -0.98
LRRC28-207ENST00000558500 POTEFA5A3E0 1075 aa8.93□□□□□ -0.98
LRRC28-207ENST00000558500 UBE2Q2LH0YL09 131 aa8.93□□□□□ -0.98
LRRC28-207ENST00000558500 GPSM2P81274 684 aa8.93□□□□□ -0.98
LRRC28-207ENST00000558500 HSP90AB3PQ58FF7 597 aa8.93□□□□□ -0.98
LRRC28-207ENST00000558500 EYA3Q99504 573 aa8.93□□□□□ -0.98
LRRC28-207ENST00000558500 LAMB4A4D0S4 1761 aa8.92□□□□□ -0.98
LRRC28-207ENST00000558500 PITPNM2Q9BZ72 1349 aa8.92□□□□□ -0.98
LRRC28-207ENST00000558500 PROSER3Q2NL68 480 aa8.92□□□□□ -0.98
LRRC28-207ENST00000558500 INTS3Q68E01 1043 aaKnown RBP8.92□□□□□ -0.98
LRRC28-207ENST00000558500 AGBL3Q8NEM8 1001 aa8.92□□□□□ -0.98
LRRC28-207ENST00000558500 TBC1D16Q8TBP0 767 aa8.92□□□□□ -0.98
LRRC28-207ENST00000558500 CELF1Q92879 486 aaKnown RBP8.92□□□□□ -0.98
LRRC28-207ENST00000558500 R3HDMLQ9H3Y0 253 aa8.92□□□□□ -0.98
LRRC28-207ENST00000558500 NUP98P52948 1817 aa8.91□□□□□ -0.98
LRRC28-207ENST00000558500 ANXA1P04083 346 aa8.91□□□□□ -0.98
LRRC28-207ENST00000558500 SREBF2Q12772 1141 aa8.91□□□□□ -0.98
LRRC28-207ENST00000558500 TCIRG1Q13488 830 aa8.91□□□□□ -0.98
LRRC28-207ENST00000558500 SF3B3Q15393 1217 aaKnown RBP8.91□□□□□ -0.98
LRRC28-207ENST00000558500 RSBN1LQ6PCB5 846 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-207ENST00000558500 ZNF609O15014 1411 aa8.9□□□□□ -0.98
LRRC28-207ENST00000558500 USP17L8P0C7I0 530 aa8.9□□□□□ -0.98
LRRC28-207ENST00000558500 CD44P16070 742 aaKnown RBP8.9□□□□□ -0.98
LRRC28-207ENST00000558500 EIF2S2P20042 333 aaKnown RBP8.9□□□□□ -0.98
LRRC28-207ENST00000558500 MKRN3Q13064 507 aaKnown RBP8.9□□□□□ -0.98
LRRC28-207ENST00000558500 PRAMEF18Q5VWM3 479 aa8.9□□□□□ -0.98
LRRC28-207ENST00000558500 COPS6Q7L5N1 327 aa8.9□□□□□ -0.98
LRRC28-207ENST00000558500 OTOP1Q7RTM1 612 aa8.9□□□□□ -0.98
LRRC28-207ENST00000558500 XAGE3Q8WTP9 111 aa8.9□□□□□ -0.98
LRRC28-207ENST00000558500 NECTIN2Q92692 538 aa8.9□□□□□ -0.98
LRRC28-207ENST00000558500 GMLQ99445 158 aa8.9□□□□□ -0.98
LRRC28-207ENST00000558500 ZC3H12CQ9C0D7 883 aaKnown RBP8.9□□□□□ -0.98
LRRC28-207ENST00000558500 MYOZ2Q9NPC6 264 aa8.9□□□□□ -0.98
LRRC28-207ENST00000558500 SCAF8Q9UPN6 1271 aaKnown RBP8.9□□□□□ -0.98
LRRC28-207ENST00000558500 TRIM17Q9Y577 477 aa8.9□□□□□ -0.98
LRRC28-207ENST00000558500 PAPPA2Q9BXP8 1791 aa8.9□□□□□ -0.98
LRRC28-207ENST00000558500 G3V3G9 751 aa8.89□□□□□ -0.99
LRRC28-207ENST00000558500 ALDH1A1P00352 501 aa8.89□□□□□ -0.99
LRRC28-207ENST00000558500 PPP2R1AP30153 589 aa8.89□□□□□ -0.99
LRRC28-207ENST00000558500 AIMP1Q12904 312 aaKnown RBP8.89□□□□□ -0.99
LRRC28-207ENST00000558500 TTLL12Q14166 644 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-207ENST00000558500 DCAF8Q5TAQ9 597 aa8.89□□□□□ -0.99
LRRC28-207ENST00000558500 ZNF428Q96B54 188 aa8.89□□□□□ -0.99
LRRC28-207ENST00000558500 PODXL2Q9NZ53 605 aa8.89□□□□□ -0.99
LRRC28-207ENST00000558500 COLQQ9Y215 455 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-207ENST00000558500 LRRC37AA6NMS7 1700 aa8.88□□□□□ -0.99
LRRC28-207ENST00000558500 AKAP11Q9UKA4 1901 aa8.88□□□□□ -0.99
LRRC28-207ENST00000558500 UFL1O94874 794 aa8.88□□□□□ -0.99
LRRC28-207ENST00000558500 NEFMP07197 916 aa8.88□□□□□ -0.99
LRRC28-207ENST00000558500 EN2P19622 333 aaPredicted RBP8.88□□□□□ -0.99
LRRC28-207ENST00000558500 RPS8P62241 208 aaKnown RBP8.88□□□□□ -0.99
LRRC28-207ENST00000558500 PTPN12Q05209 780 aaKnown RBP8.88□□□□□ -0.99
LRRC28-207ENST00000558500 NFE2L2Q16236 605 aa8.88□□□□□ -0.99
LRRC28-207ENST00000558500 NBPF9Q3BBW0 867 aa8.88□□□□□ -0.99
LRRC28-207ENST00000558500 ARMC5Q96C12 935 aa8.88□□□□□ -0.99
LRRC28-207ENST00000558500 FAM89AQ96GI7 184 aa8.88□□□□□ -0.99
LRRC28-207ENST00000558500 TSPYL4Q9UJ04 414 aa8.88□□□□□ -0.99
LRRC28-207ENST00000558500 CUL9Q8IWT3 2517 aa8.87□□□□□ -0.99
LRRC28-207ENST00000558500 KDM3BQ7LBC6 1761 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms