RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 RXRAP19793 462 aa18.06■□□□□ 0.48
AP4E1-202ENST00000558439 JMYQ8N9B5 988 aa18.06■□□□□ 0.48
AP4E1-202ENST00000558439 ERCC4Q92889 916 aaPredicted RBP18.06■□□□□ 0.48
AP4E1-202ENST00000558439 TM6SF1Q9BZW5 370 aa18.06■□□□□ 0.48
AP4E1-202ENST00000558439 HOOK1Q9UJC3 728 aaKnown RBP18.06■□□□□ 0.48
AP4E1-202ENST00000558439 KDRP35968 1356 aa18.06■□□□□ 0.48
AP4E1-202ENST00000558439 CYP2E1P05181 493 aaPredicted RBP18.06■□□□□ 0.48
AP4E1-202ENST00000558439 ZNF771Q7L3S4 317 aaPredicted RBP18.06■□□□□ 0.48
AP4E1-202ENST00000558439 HELBQ8NG08 1087 aaPredicted RBP18.06■□□□□ 0.48
AP4E1-202ENST00000558439 LRP2BPQ9P2M1 347 aa18.06■□□□□ 0.48
AP4E1-202ENST00000558439 ZSCAN25Q6NSZ9 544 aa18.05■□□□□ 0.48
AP4E1-202ENST00000558439 PDCL2Q8N4E4 241 aa18.05■□□□□ 0.48
AP4E1-202ENST00000558439 A0A1B0GUL7 405 aa18.05■□□□□ 0.48
AP4E1-202ENST00000558439 AXIN2Q9Y2T1 843 aa18.05■□□□□ 0.48
AP4E1-202ENST00000558439 LEO1Q8WVC0 666 aaPredicted RBP18.05■□□□□ 0.48
AP4E1-202ENST00000558439 DBNLQ9UJU6 430 aaKnown RBP18.05■□□□□ 0.48
AP4E1-202ENST00000558439 DYNC1I1O14576 645 aa18.05■□□□□ 0.48
AP4E1-202ENST00000558439 MARCKSP29966 332 aaPredicted RBP18.05■□□□□ 0.48
AP4E1-202ENST00000558439 CADPS2Q86UW7 1296 aa18.05■□□□□ 0.48
AP4E1-202ENST00000558439 MAP4K1Q92918 833 aa18.05■□□□□ 0.48
AP4E1-202ENST00000558439 MINDY4BA8MYZ0 360 aa18.04■□□□□ 0.48
AP4E1-202ENST00000558439 TRIM22Q8IYM9 498 aa18.04■□□□□ 0.48
AP4E1-202ENST00000558439 MNS1Q8NEH6 495 aa18.04■□□□□ 0.48
AP4E1-202ENST00000558439 NAPBQ9H115 298 aa18.04■□□□□ 0.48
AP4E1-202ENST00000558439 HSPA2P54652 639 aa18.04■□□□□ 0.48
AP4E1-202ENST00000558439 TTLL7Q6ZT98 887 aa18.04■□□□□ 0.48
AP4E1-202ENST00000558439 ADGRB2O60241 1585 aa18.03■□□□□ 0.48
AP4E1-202ENST00000558439 CFAP100Q494V2 611 aa18.03■□□□□ 0.48
AP4E1-202ENST00000558439 CLEC17AQ6ZS10 378 aa18.03■□□□□ 0.48
AP4E1-202ENST00000558439 EPB41L2O43491 1005 aaKnown RBP18.03■□□□□ 0.48
AP4E1-202ENST00000558439 STX1AQ16623 288 aa18.03■□□□□ 0.48
AP4E1-202ENST00000558439 HSP90AA4PQ58FG1 418 aa18.03■□□□□ 0.48
AP4E1-202ENST00000558439 TTLL5Q6EMB2 1281 aa18.03■□□□□ 0.48
AP4E1-202ENST00000558439 PLBD2Q8NHP8 589 aa18.03■□□□□ 0.48
AP4E1-202ENST00000558439 IQSEC3Q9UPP2 1182 aaPredicted RBP18.03■□□□□ 0.48
AP4E1-202ENST00000558439 ANKRD18BA2A2Z9 1011 aa18.03■□□□□ 0.48
AP4E1-202ENST00000558439 RNF113AO15541 343 aaKnown RBP18.03■□□□□ 0.48
AP4E1-202ENST00000558439 PHKG2P15735 406 aa18.03■□□□□ 0.48
AP4E1-202ENST00000558439 PTPN14Q15678 1187 aa18.03■□□□□ 0.48
AP4E1-202ENST00000558439 ATP2B3Q16720 1220 aa18.03■□□□□ 0.48
AP4E1-202ENST00000558439 EPHA10Q5JZY3 1008 aa18.03■□□□□ 0.48
AP4E1-202ENST00000558439 SLC9C2Q5TAH2 1124 aa18.03■□□□□ 0.48
AP4E1-202ENST00000558439 BICDL1Q6ZP65 573 aa18.03■□□□□ 0.48
AP4E1-202ENST00000558439 PRC1O43663 620 aa18.02■□□□□ 0.48
AP4E1-202ENST00000558439 SLC3A2P08195 630 aaKnown RBP18.02■□□□□ 0.48
AP4E1-202ENST00000558439 KBTBD3Q8NAB2 608 aa18.02■□□□□ 0.48
AP4E1-202ENST00000558439 NCOA7Q8NI08 942 aa18.02■□□□□ 0.48
AP4E1-202ENST00000558439 NACAP1Q9BZK3 213 aa18.02■□□□□ 0.48
AP4E1-202ENST00000558439 CLTCQ00610 1675 aaKnown RBP18.02■□□□□ 0.48
AP4E1-202ENST00000558439 USP31Q70CQ4 1352 aa18.02■□□□□ 0.48
AP4E1-202ENST00000558439 SPDYE4A6NLX3 237 aa18.02■□□□□ 0.48
AP4E1-202ENST00000558439 OVOS2A0A0J9YW53 1432 aa18.02■□□□□ 0.48
AP4E1-202ENST00000558439 OVOS2Q6IE36 1432 aa18.02■□□□□ 0.48
AP4E1-202ENST00000558439 IFIT3O14879 490 aaKnown RBP18.02■□□□□ 0.47
AP4E1-202ENST00000558439 CTAGE5O15320 804 aa18.02■□□□□ 0.47
AP4E1-202ENST00000558439 ATP5JP18859 108 aa18.02■□□□□ 0.47
AP4E1-202ENST00000558439 SLFNL1Q499Z3 407 aa18.02■□□□□ 0.47
AP4E1-202ENST00000558439 RAI14Q9P0K7 980 aa18.02■□□□□ 0.47
AP4E1-202ENST00000558439 A0A1B0GVL5 298 aa18.01■□□□□ 0.47
AP4E1-202ENST00000558439 CDKL5O76039 1030 aa18.01■□□□□ 0.47
AP4E1-202ENST00000558439 TMEM131LA2VDJ0 1609 aa18.01■□□□□ 0.47
AP4E1-202ENST00000558439 EYA2O00167 538 aa18.01■□□□□ 0.47
AP4E1-202ENST00000558439 AOPEPQ8N6M6 819 aa18.01■□□□□ 0.47
AP4E1-202ENST00000558439 TAF5LO75529 589 aa18.01■□□□□ 0.47
AP4E1-202ENST00000558439 CBX8Q9HC52 389 aa18.01■□□□□ 0.47
AP4E1-202ENST00000558439 PREX1Q8TCU6 1659 aa18■□□□□ 0.47
AP4E1-202ENST00000558439 NCOA3Q9Y6Q9 1424 aa18■□□□□ 0.47
AP4E1-202ENST00000558439 IGKV5-2P06315 115 aa18■□□□□ 0.47
AP4E1-202ENST00000558439 NR1I2O75469 434 aa18■□□□□ 0.47
AP4E1-202ENST00000558439 SFPQP23246 707 aaKnown RBP eCLIP18■□□□□ 0.47
AP4E1-202ENST00000558439 NECTIN1Q15223 517 aa18■□□□□ 0.47
AP4E1-202ENST00000558439 TMC6Q7Z403 805 aa18■□□□□ 0.47
AP4E1-202ENST00000558439 UBAC1Q9BSL1 405 aa18■□□□□ 0.47
AP4E1-202ENST00000558439 CDC42BPGQ6DT37 1551 aa18■□□□□ 0.47
AP4E1-202ENST00000558439 GOLGA8AA7E2F4 631 aa18■□□□□ 0.47
AP4E1-202ENST00000558439 LRRC24Q50LG9 513 aa18■□□□□ 0.47
AP4E1-202ENST00000558439 UBE2Q2Q8WVN8 375 aa18■□□□□ 0.47
AP4E1-202ENST00000558439 AK9Q5TCS8 1911 aa18■□□□□ 0.47
AP4E1-202ENST00000558439 METAP2P50579 478 aaKnown RBP eCLIP17.99■□□□□ 0.47
AP4E1-202ENST00000558439 PRIMPOLQ96LW4 560 aa17.99■□□□□ 0.47
AP4E1-202ENST00000558439 DLC1Q96QB1 1528 aa17.99■□□□□ 0.47
AP4E1-202ENST00000558439 TMEM67Q5HYA8 995 aa17.99■□□□□ 0.47
AP4E1-202ENST00000558439 PPP4R3BQ5MIZ7 849 aa17.99■□□□□ 0.47
AP4E1-202ENST00000558439 SLC12A7Q9Y666 1083 aa17.99■□□□□ 0.47
AP4E1-202ENST00000558439 ADAMTS13Q76LX8 1427 aa17.98■□□□□ 0.47
AP4E1-202ENST00000558439 ZNF500O60304 480 aaPredicted RBP17.98■□□□□ 0.47
AP4E1-202ENST00000558439 XBP1P17861 261 aa17.98■□□□□ 0.47
AP4E1-202ENST00000558439 MRPS27Q92552 414 aaKnown RBP17.98■□□□□ 0.47
AP4E1-202ENST00000558439 SKILP12757 684 aa17.98■□□□□ 0.47
AP4E1-202ENST00000558439 IARSP41252 1262 aaKnown RBP17.98■□□□□ 0.47
AP4E1-202ENST00000558439 A0A087WWV3 80 aa17.98■□□□□ 0.47
AP4E1-202ENST00000558439 NUTM2BA6NNL0 878 aaPredicted RBP17.98■□□□□ 0.47
AP4E1-202ENST00000558439 NUTM2EB1AL46 878 aaPredicted RBP17.98■□□□□ 0.47
AP4E1-202ENST00000558439 CYP21A2P08686 494 aa17.98■□□□□ 0.47
AP4E1-202ENST00000558439 NUTM2AQ8IVF1 878 aaPredicted RBP17.98■□□□□ 0.47
AP4E1-202ENST00000558439 SLC26A6Q9BXS9 759 aa17.98■□□□□ 0.47
AP4E1-202ENST00000558439 GTF3C6Q969F1 213 aa17.98■□□□□ 0.47
AP4E1-202ENST00000558439 ALG1Q9BT22 464 aa17.98■□□□□ 0.47
AP4E1-202ENST00000558439 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.98■□□□□ 0.47
AP4E1-202ENST00000558439 V9GYY5 206 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms