RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 ARHGAP24Q8N264 748 aa13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 MED4Q9NPJ6 270 aa13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 LZTFL1Q9NQ48 299 aa13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 CAPN7Q9Y6W3 813 aa13.36□□□□□ -0.27
CSPG4P12-201ENST00000558282 GOLGA8BA8MQT2 603 aa13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 ATP2A1O14983 1001 aa13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 RPGRIP1Q96KN7 1286 aa13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 TRIM47Q96LD4 638 aa13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 NEK1Q96PY6 1258 aa13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 ORC3Q9UBD5 711 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 IL16Q14005 1332 aa13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 RTL1A6NKG5 1358 aa13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 TMEM266Q2M3C6 531 aa13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 GBP5Q96PP8 586 aa13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 CASQ2O14958 399 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 FKBP4Q02790 459 aaKnown RBP eCLIP13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 CEP128Q6ZU80 1094 aa13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 CCDC42Q96M95 316 aa13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 PNMA8AQ86V59 439 aaPredicted RBP13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 RAB11FIP4Q86YS3 637 aa13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 RNF10Q8N5U6 811 aaKnown RBP13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 CNNM1Q9NRU3 951 aa13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 RRP15Q9Y3B9 282 aaKnown RBP13.35□□□□□ -0.27
CSPG4P12-201ENST00000558282 TBC1D31Q96DN5 1066 aa13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 ECHDC1Q9NTX5 307 aa13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 CWC25Q9NXE8 425 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 NKIRAS1Q9NYS0 192 aa13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 AKR1B15C9JRZ8 316 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 SDSP20132 328 aa13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 CTNNA2P26232 953 aa13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 TRIM14Q14142 442 aa13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 GUCA1BQ9UMX6 200 aa13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 ARHGAP6O43182 974 aa13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 KIAA1524Q8TCG1 905 aa13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 ESYT1Q9BSJ8 1104 aa13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 SLC12A7Q9Y666 1083 aa13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 A0A087WUV0 522 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 IARSP41252 1262 aaKnown RBP13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 MYL5Q02045 173 aa13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 TMEM132AQ24JP5 1023 aa13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 RABGAP1Q9Y3P9 1069 aa13.34□□□□□ -0.27
CSPG4P12-201ENST00000558282 KIF21AQ7Z4S6 1674 aa13.33□□□□□ -0.27
CSPG4P12-201ENST00000558282 PRG4Q92954 1404 aaPredicted RBP13.33□□□□□ -0.27
CSPG4P12-201ENST00000558282 VIMP08670 466 aaKnown RBP13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 SEC62Q99442 399 aaKnown RBP13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 TCP11L1Q9NUJ3 509 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 BAIAP2L1Q9UHR4 511 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 USP16Q9Y5T5 823 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 DAPK1P53355 1430 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 IFT20Q8IY31 132 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 IFT81Q8WYA0 676 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 URB2Q14146 1524 aaKnown RBP13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 SULT6B1Q6IMI4 303 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 NUTM2AQ8IVF1 878 aaPredicted RBP13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 CAPZA3Q96KX2 299 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 TSNARE1Q96NA8 513 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 A0A087WZG4 1122 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 GOLGA8AA7E2F4 631 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 DBN1Q16643 649 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 ISM2Q6H9L7 571 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 FAM71BQ8TC56 605 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 AIDAQ96BJ3 306 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 SLC12A5Q9H2X9 1139 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 PCDHB15Q9Y5E8 787 aa13.33□□□□□ -0.28
CSPG4P12-201ENST00000558282 GRIN2AQ12879 1464 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 ZNF644Q9H582 1327 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 EFCAB8A8MWE9 144 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 RRAGBQ5VZM2 374 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 JAKMIP2Q96AA8 810 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 ARHGAP5Q13017 1502 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 MACROD2A1Z1Q3 448 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 PSMA7O14818 248 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 RASSF2P50749 326 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 SF3B2Q13435 895 aaKnown RBP13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 ZKSCAN8Q15776 578 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 ICE2Q659A1 982 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 CCDC26Q8TAB7 109 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 CALML4Q96GE6 196 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 DDX23Q9BUQ8 820 aaKnown RBP13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 FAM114A2Q9NRY5 505 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 LARSQ9P2J5 1176 aaKnown RBP13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 KIF1CO43896 1103 aaKnown RBP13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 RFC1P35251 1148 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 SNCBQ16143 134 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 CFAP70Q5T0N1 1121 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 NEK11Q8NG66 645 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 RAB3IL1Q8TBN0 382 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 STRN4Q9NRL3 753 aa13.32□□□□□ -0.28
CSPG4P12-201ENST00000558282 ACTN2P35609 894 aa13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 CCT2P78371 535 aaKnown RBP13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 RNF41Q9H4P4 317 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 SPG7Q9UQ90 795 aa13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 CTTNBP2Q8WZ74 1663 aa13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 LRRD1A4D1F6 860 aa13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 ZNF213O14771 459 aa13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 HIP1RO75146 1068 aa13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 RPUSD2Q8IZ73 545 aaKnown RBP13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 PAF1Q8N7H5 531 aa13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 TRIM4Q9C037 500 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms