RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 FPGT-TNNI3KV9GXZ4 949 aa20.72■□□□□ 0.91
SNX1-203ENST00000558040 C10orf71Q711Q0 1435 aa20.71■□□□□ 0.91
SNX1-203ENST00000558040 MX1P20591 662 aa20.71■□□□□ 0.91
SNX1-203ENST00000558040 PLEKHM2Q8IWE5 1019 aa20.71■□□□□ 0.91
SNX1-203ENST00000558040 ATF5Q9Y2D1 282 aaPredicted RBP20.71■□□□□ 0.91
SNX1-203ENST00000558040 H0YIN7 160 aa20.7■□□□□ 0.9
SNX1-203ENST00000558040 SRGNP10124 158 aa20.7■□□□□ 0.9
SNX1-203ENST00000558040 TMC4Q7Z404 712 aa20.7■□□□□ 0.9
SNX1-203ENST00000558040 EAF2Q96CJ1 260 aaPredicted RBP20.7■□□□□ 0.9
SNX1-203ENST00000558040 MASTLQ96GX5 879 aa20.7■□□□□ 0.9
SNX1-203ENST00000558040 AOX1Q06278 1338 aa20.7■□□□□ 0.9
SNX1-203ENST00000558040 ZNF609O15014 1411 aa20.7■□□□□ 0.9
SNX1-203ENST00000558040 BBOX1O75936 387 aa20.69■□□□□ 0.9
SNX1-203ENST00000558040 PDE8BO95263 885 aa20.69■□□□□ 0.9
SNX1-203ENST00000558040 ALDH1B1P30837 517 aa20.69■□□□□ 0.9
SNX1-203ENST00000558040 C2CD5Q86YS7 1000 aa20.69■□□□□ 0.9
SNX1-203ENST00000558040 OTUD7AQ8TE49 926 aaPredicted RBP20.69■□□□□ 0.9
SNX1-203ENST00000558040 OSBPL3Q9H4L5 887 aa20.69■□□□□ 0.9
SNX1-203ENST00000558040 SALL3Q9BXA9 1300 aa20.69■□□□□ 0.9
SNX1-203ENST00000558040 PDE1AP54750 535 aa20.68■□□□□ 0.9
SNX1-203ENST00000558040 CHRNDQ07001 517 aa20.68■□□□□ 0.9
SNX1-203ENST00000558040 PUM3Q15397 648 aaKnown RBP20.68■□□□□ 0.9
SNX1-203ENST00000558040 STYK1Q6J9G0 422 aa20.68■□□□□ 0.9
SNX1-203ENST00000558040 VGLL2Q8N8G2 317 aa20.68■□□□□ 0.9
SNX1-203ENST00000558040 ANKRD2Q9GZV1 360 aa20.68■□□□□ 0.9
SNX1-203ENST00000558040 STAP2Q9UGK3 403 aa20.68■□□□□ 0.9
SNX1-203ENST00000558040 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.68■□□□□ 0.9
SNX1-203ENST00000558040 TTC41PQ6P2S7 1318 aa20.68■□□□□ 0.9
SNX1-203ENST00000558040 COL4A1P02462 1669 aa20.67■□□□□ 0.9
SNX1-203ENST00000558040 COL11A2P13942 1736 aaPredicted RBP20.67■□□□□ 0.9
SNX1-203ENST00000558040 TAF1P21675 1872 aa20.67■□□□□ 0.9
SNX1-203ENST00000558040 A0A1B0GUL7 405 aa20.67■□□□□ 0.9
SNX1-203ENST00000558040 ATP2B3Q16720 1220 aa20.67■□□□□ 0.9
SNX1-203ENST00000558040 MINPP1Q9UNW1 487 aa20.67■□□□□ 0.9
SNX1-203ENST00000558040 ERC2O15083 957 aa20.66■□□□□ 0.9
SNX1-203ENST00000558040 NEUROD6Q96NK8 337 aa20.66■□□□□ 0.9
SNX1-203ENST00000558040 CCDC8Q9H0W5 538 aaPredicted RBP20.66■□□□□ 0.9
SNX1-203ENST00000558040 ECHDC1Q9NTX5 307 aa20.66■□□□□ 0.9
SNX1-203ENST00000558040 PPEF1O14829 653 aaPredicted RBP20.65■□□□□ 0.9
SNX1-203ENST00000558040 SLC5A1P13866 664 aa20.65■□□□□ 0.9
SNX1-203ENST00000558040 LPIN2Q92539 896 aa20.65■□□□□ 0.9
SNX1-203ENST00000558040 ZNF622Q969S3 477 aaKnown RBP eCLIP20.65■□□□□ 0.95e-7■■■■□ 20.8
SNX1-203ENST00000558040 TTC22Q5TAA0 569 aa20.64■□□□□ 0.89
SNX1-203ENST00000558040 HELBQ8NG08 1087 aaPredicted RBP20.64■□□□□ 0.89
SNX1-203ENST00000558040 CNKSR1Q969H4 720 aa20.64■□□□□ 0.89
SNX1-203ENST00000558040 TMX4Q9H1E5 349 aaPredicted RBP20.64■□□□□ 0.89
SNX1-203ENST00000558040 DBNLQ9UJU6 430 aaKnown RBP20.64■□□□□ 0.89
SNX1-203ENST00000558040 KIF13BQ9NQT8 1826 aa20.64■□□□□ 0.89
SNX1-203ENST00000558040 GLRX3O76003 335 aaKnown RBP20.63■□□□□ 0.89
SNX1-203ENST00000558040 IFIT1P09914 478 aaKnown RBP20.63■□□□□ 0.89
SNX1-203ENST00000558040 TIMM10P62072 90 aa20.63■□□□□ 0.89
SNX1-203ENST00000558040 BMP2KLQ5H9B9 411 aa20.63■□□□□ 0.89
SNX1-203ENST00000558040 GORABQ5T7V8 394 aa20.63■□□□□ 0.89
SNX1-203ENST00000558040 SGIP1Q9BQI5 828 aa20.63■□□□□ 0.89
SNX1-203ENST00000558040 DBNDD2Q9BQY9 259 aa20.63■□□□□ 0.89
SNX1-203ENST00000558040 TLR7Q9NYK1 1049 aaKnown RBP20.63■□□□□ 0.89
SNX1-203ENST00000558040 A0A1B0GUL6 1792 aa20.62■□□□□ 0.89
SNX1-203ENST00000558040 TAF5LO75529 589 aa20.62■□□□□ 0.89
SNX1-203ENST00000558040 FGFR2P21802 821 aa20.62■□□□□ 0.89
SNX1-203ENST00000558040 KCNJ4P48050 445 aa20.62■□□□□ 0.89
SNX1-203ENST00000558040 TGFB2P61812 414 aa20.62■□□□□ 0.89
SNX1-203ENST00000558040 UBE4AQ14139 1066 aa20.62■□□□□ 0.89
SNX1-203ENST00000558040 XAGE2Q96GT9 111 aa20.62■□□□□ 0.89
SNX1-203ENST00000558040 SPON1Q9HCB6 807 aa20.62■□□□□ 0.89
SNX1-203ENST00000558040 XDHP47989 1333 aa20.61■□□□□ 0.89
SNX1-203ENST00000558040 CHRNA5P30532 468 aa20.61■□□□□ 0.89
SNX1-203ENST00000558040 PTGER2P43116 358 aa20.61■□□□□ 0.89
SNX1-203ENST00000558040 CCDC158Q5M9N0 1113 aa20.61■□□□□ 0.89
SNX1-203ENST00000558040 SP8Q8IXZ3 490 aa20.61■□□□□ 0.89
SNX1-203ENST00000558040 ANKIB1Q9P2G1 1089 aa20.61■□□□□ 0.89
SNX1-203ENST00000558040 ATP6V0A2Q9Y487 856 aa20.61■□□□□ 0.89
SNX1-203ENST00000558040 ARAP2Q8WZ64 1704 aa20.61■□□□□ 0.89
SNX1-203ENST00000558040 DLEC1Q9Y238 1755 aa20.6■□□□□ 0.89
SNX1-203ENST00000558040 TSHZ3Q63HK5 1081 aa20.6■□□□□ 0.89
SNX1-203ENST00000558040 PI4K2BQ8TCG2 481 aa20.6■□□□□ 0.89
SNX1-203ENST00000558040 LRRC37AA6NMS7 1700 aa20.6■□□□□ 0.89
SNX1-203ENST00000558040 ATP5JP18859 108 aa20.59■□□□□ 0.89
SNX1-203ENST00000558040 LEMD3Q9Y2U8 911 aa20.59■□□□□ 0.89
SNX1-203ENST00000558040 CD2APQ9Y5K6 639 aa20.59■□□□□ 0.89
SNX1-203ENST00000558040 GSPT1P15170 499 aaKnown RBP20.58■□□□□ 0.89
SNX1-203ENST00000558040 ADORA1P30542 326 aa20.58■□□□□ 0.89
SNX1-203ENST00000558040 TTC39AQ5SRH9 613 aa20.58■□□□□ 0.89
SNX1-203ENST00000558040 PRPF40BQ6NWY9 871 aaKnown RBP20.58■□□□□ 0.89
SNX1-203ENST00000558040 ZNF804BA4D1E1 1349 aa20.57■□□□□ 0.88
SNX1-203ENST00000558040 DPEP1P16444 411 aa20.57■□□□□ 0.88
SNX1-203ENST00000558040 ATP2B4P23634 1241 aa20.57■□□□□ 0.88
SNX1-203ENST00000558040 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.57■□□□□ 0.88
SNX1-203ENST00000558040 PODXL2Q9NZ53 605 aa20.57■□□□□ 0.88
SNX1-203ENST00000558040 GPSM2P81274 684 aa20.56■□□□□ 0.88
SNX1-203ENST00000558040 CAVIN4Q5BKX8 364 aa20.56■□□□□ 0.88
SNX1-203ENST00000558040 TTLL6Q8N841 843 aa20.56■□□□□ 0.88
SNX1-203ENST00000558040 ZNF512BQ96KM6 892 aaPredicted RBP20.56■□□□□ 0.88
SNX1-203ENST00000558040 PPP1R1BQ9UD71 204 aaPredicted RBP20.56■□□□□ 0.88
SNX1-203ENST00000558040 GGA1Q9UJY5 639 aa20.56■□□□□ 0.88
SNX1-203ENST00000558040 NSFL1CQ9UNZ2 370 aaKnown RBP20.56■□□□□ 0.88
SNX1-203ENST00000558040 A0A0G2JLW4 131 aa20.55■□□□□ 0.88
SNX1-203ENST00000558040 TRIM6-TRIM34B2RNG4 842 aa20.55■□□□□ 0.88
SNX1-203ENST00000558040 UQCRFS1P1P0C7P4 283 aa20.55■□□□□ 0.88
SNX1-203ENST00000558040 CC2D2BQ6DHV5 1058 aa20.55■□□□□ 0.88
SNX1-203ENST00000558040 CNTROBQ8N137 903 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms