RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 A0A1W2PPC1 479 aa12.74□□□□□ -0.37
NEDD1-211ENST00000557454 GNAT3A8MTJ3 354 aa12.74□□□□□ -0.37
NEDD1-211ENST00000557454 ECE2O60344 883 aa12.74□□□□□ -0.37
NEDD1-211ENST00000557454 BBOX1O75936 387 aa12.74□□□□□ -0.37
NEDD1-211ENST00000557454 PTPN12Q05209 780 aaKnown RBP12.74□□□□□ -0.37
NEDD1-211ENST00000557454 TCIRG1Q13488 830 aa12.74□□□□□ -0.37
NEDD1-211ENST00000557454 Q7L0L9 218 aa12.74□□□□□ -0.37
NEDD1-211ENST00000557454 MORC1Q86VD1 984 aa12.74□□□□□ -0.37
NEDD1-211ENST00000557454 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.74□□□□□ -0.37
NEDD1-211ENST00000557454 NGEFQ8N5V2 710 aa12.74□□□□□ -0.37
NEDD1-211ENST00000557454 DEFB123Q8N688 67 aa12.74□□□□□ -0.37
NEDD1-211ENST00000557454 NLRP3Q96P20 1036 aa12.74□□□□□ -0.37
NEDD1-211ENST00000557454 SPINK5Q9NQ38 1064 aaPredicted RBP12.74□□□□□ -0.37
NEDD1-211ENST00000557454 CEMIPQ8WUJ3 1361 aa12.73□□□□□ -0.37
NEDD1-211ENST00000557454 IGF2BP3O00425 579 aaKnown RBP eCLIP12.73□□□□□ -0.37
NEDD1-211ENST00000557454 RIMBP2O15034 1052 aa12.73□□□□□ -0.37
NEDD1-211ENST00000557454 DOK7Q18PE1 504 aa12.73□□□□□ -0.37
NEDD1-211ENST00000557454 WASHC4Q2M389 1173 aa12.73□□□□□ -0.37
NEDD1-211ENST00000557454 SPRYD7Q5W111 196 aa12.73□□□□□ -0.37
NEDD1-211ENST00000557454 NBPF11Q86T75 865 aa12.73□□□□□ -0.37
NEDD1-211ENST00000557454 SHISA4Q96DD7 197 aa12.73□□□□□ -0.37
NEDD1-211ENST00000557454 POLR3GLQ9BT43 218 aa12.73□□□□□ -0.37
NEDD1-211ENST00000557454 MAP3K15Q6ZN16 1313 aa12.72□□□□□ -0.37
NEDD1-211ENST00000557454 ERVV-1B6SEH8 477 aa12.72□□□□□ -0.37
NEDD1-211ENST00000557454 CRHR2Q13324 411 aa12.72□□□□□ -0.37
NEDD1-211ENST00000557454 MANSC4A6NHS7 340 aaPredicted RBP12.71□□□□□ -0.37
NEDD1-211ENST00000557454 ZNF280AP59817 542 aaPredicted RBP12.71□□□□□ -0.37
NEDD1-211ENST00000557454 PRKG1Q13976 671 aa12.71□□□□□ -0.37
NEDD1-211ENST00000557454 TTLL7Q6ZT98 887 aa12.71□□□□□ -0.37
NEDD1-211ENST00000557454 ZBTB3Q9H5J0 574 aa12.71□□□□□ -0.37
NEDD1-211ENST00000557454 TTC28Q96AY4 2481 aa12.71□□□□□ -0.37
NEDD1-211ENST00000557454 MUC3AQ02505 3323 aa12.7□□□□□ -0.38
NEDD1-211ENST00000557454 ERBB4Q15303 1308 aa12.7□□□□□ -0.38
NEDD1-211ENST00000557454 ZBTB7BO15156 539 aaPredicted RBP12.7□□□□□ -0.38
NEDD1-211ENST00000557454 VIL1P09327 827 aaKnown RBP12.7□□□□□ -0.38
NEDD1-211ENST00000557454 COL9A1P20849 921 aa12.7□□□□□ -0.38
NEDD1-211ENST00000557454 SP3Q02447 781 aa12.7□□□□□ -0.38
NEDD1-211ENST00000557454 GRAPQ13588 217 aa12.7□□□□□ -0.38
NEDD1-211ENST00000557454 KIF6Q6ZMV9 814 aa12.7□□□□□ -0.38
NEDD1-211ENST00000557454 ANKRD13DQ6ZTN6 518 aa12.7□□□□□ -0.38
NEDD1-211ENST00000557454 ZNF34Q8IZ26 560 aa12.7□□□□□ -0.38
NEDD1-211ENST00000557454 GAS2L2Q8NHY3 880 aa12.7□□□□□ -0.38
NEDD1-211ENST00000557454 GRAPLQ8TC17 118 aaPredicted RBP12.7□□□□□ -0.38
NEDD1-211ENST00000557454 SH3TC2Q8TF17 1288 aa12.7□□□□□ -0.38
NEDD1-211ENST00000557454 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.7□□□□□ -0.38
NEDD1-211ENST00000557454 NF2P35240 595 aa12.69□□□□□ -0.38
NEDD1-211ENST00000557454 HTATIP2Q9BUP3 242 aa12.69□□□□□ -0.38
NEDD1-211ENST00000557454 MYOZ2Q9NPC6 264 aa12.69□□□□□ -0.38
NEDD1-211ENST00000557454 NR2E3Q9Y5X4 410 aa12.69□□□□□ -0.38
NEDD1-211ENST00000557454 EYSQ5T1H1 3165 aa12.68□□□□□ -0.38
NEDD1-211ENST00000557454 C6orf229H3BNL8 230 aa12.68□□□□□ -0.38
NEDD1-211ENST00000557454 INHBEP58166 350 aa12.68□□□□□ -0.38
NEDD1-211ENST00000557454 GPR153Q6NV75 609 aa12.68□□□□□ -0.38
NEDD1-211ENST00000557454 DDX46Q7L014 1031 aaKnown RBP12.68□□□□□ -0.38
NEDD1-211ENST00000557454 ARMC9Q7Z3E5 817 aa12.68□□□□□ -0.38
NEDD1-211ENST00000557454 PPP1R42Q7Z4L9 355 aa12.68□□□□□ -0.38
NEDD1-211ENST00000557454 MTMR10Q9NXD2 777 aa12.68□□□□□ -0.38
NEDD1-211ENST00000557454 POLLQ9UGP5 575 aa12.68□□□□□ -0.38
NEDD1-211ENST00000557454 NSFL1CQ9UNZ2 370 aaKnown RBP12.68□□□□□ -0.38
NEDD1-211ENST00000557454 KDM3BQ7LBC6 1761 aa12.68□□□□□ -0.38
NEDD1-211ENST00000557454 NUP98P52948 1817 aa12.67□□□□□ -0.38
NEDD1-211ENST00000557454 HCLS1P14317 486 aaPredicted RBP12.67□□□□□ -0.38
NEDD1-211ENST00000557454 SLC10A5Q5PT55 438 aa12.67□□□□□ -0.38
NEDD1-211ENST00000557454 LDLRAD1Q5T700 205 aa12.67□□□□□ -0.38
NEDD1-211ENST00000557454 STAP2Q9UGK3 403 aa12.67□□□□□ -0.38
NEDD1-211ENST00000557454 RAPGEFL1Q9UHV5 662 aa12.67□□□□□ -0.38
NEDD1-211ENST00000557454 FZD1Q9UP38 647 aa12.67□□□□□ -0.38
NEDD1-211ENST00000557454 LRRC37AA6NMS7 1700 aa12.66□□□□□ -0.38
NEDD1-211ENST00000557454 NBPF9Q3BBW0 867 aa12.66□□□□□ -0.38
NEDD1-211ENST00000557454 PARP10Q53GL7 1025 aa12.66□□□□□ -0.38
NEDD1-211ENST00000557454 RSBN1LQ6PCB5 846 aaPredicted RBP12.66□□□□□ -0.38
NEDD1-211ENST00000557454 UBE2Q1Q7Z7E8 422 aa12.66□□□□□ -0.38
NEDD1-211ENST00000557454 UTP14AQ9BVJ6 771 aaKnown RBP12.66□□□□□ -0.38
NEDD1-211ENST00000557454 PANK3Q9H999 370 aa12.66□□□□□ -0.38
NEDD1-211ENST00000557454 ANGEL1Q9UNK9 670 aaKnown RBP12.66□□□□□ -0.38
NEDD1-211ENST00000557454 SCN9AQ15858 1988 aa12.66□□□□□ -0.38
NEDD1-211ENST00000557454 GPSM2P81274 684 aa12.65□□□□□ -0.38
NEDD1-211ENST00000557454 MTFR1Q15390 333 aa12.65□□□□□ -0.38
NEDD1-211ENST00000557454 TMC4Q7Z404 712 aa12.65□□□□□ -0.38
NEDD1-211ENST00000557454 AGBL3Q8NEM8 1001 aa12.65□□□□□ -0.38
NEDD1-211ENST00000557454 WNK4Q96J92 1243 aa12.65□□□□□ -0.38
NEDD1-211ENST00000557454 DDX60Q8IY21 1712 aaKnown RBP12.65□□□□□ -0.38
NEDD1-211ENST00000557454 USP17L8P0C7I0 530 aa12.64□□□□□ -0.39
NEDD1-211ENST00000557454 ZBTB48P10074 688 aaPredicted RBP12.64□□□□□ -0.39
NEDD1-211ENST00000557454 GIGYF2Q6Y7W6 1299 aaKnown RBP12.64□□□□□ -0.39
NEDD1-211ENST00000557454 SLC10A4Q96EP9 437 aa12.64□□□□□ -0.39
NEDD1-211ENST00000557454 CLMNQ96JQ2 1002 aa12.64□□□□□ -0.39
NEDD1-211ENST00000557454 EYA3Q99504 573 aa12.64□□□□□ -0.39
NEDD1-211ENST00000557454 RRP7AQ9Y3A4 280 aaKnown RBP12.64□□□□□ -0.39
NEDD1-211ENST00000557454 DIAPH1O60610 1272 aaKnown RBP12.63□□□□□ -0.39
NEDD1-211ENST00000557454 MYL6BP14649 208 aa12.63□□□□□ -0.39
NEDD1-211ENST00000557454 OTUD7BQ6GQQ9 843 aa12.63□□□□□ -0.39
NEDD1-211ENST00000557454 NECTIN2Q92692 538 aa12.63□□□□□ -0.39
NEDD1-211ENST00000557454 GMLQ99445 158 aa12.63□□□□□ -0.39
NEDD1-211ENST00000557454 PRUNE2Q8WUY3 3088 aa12.63□□□□□ -0.39
NEDD1-211ENST00000557454 LAMB2P55268 1798 aa12.62□□□□□ -0.39
NEDD1-211ENST00000557454 PLA2G5P39877 138 aa12.62□□□□□ -0.39
NEDD1-211ENST00000557454 ARHGEF6Q15052 776 aa12.62□□□□□ -0.39
NEDD1-211ENST00000557454 TBC1D16Q8TBP0 767 aa12.62□□□□□ -0.39
NEDD1-211ENST00000557454 CELF1Q92879 486 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms