RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 NPAS4Q8IUM7 802 aa4.81□□□□□ -1.64
HMGB1P14-201ENST00000557424 SVOPQ8N4V2 548 aa4.81□□□□□ -1.64
HMGB1P14-201ENST00000557424 OR13H1Q8NG92 308 aa4.81□□□□□ -1.64
HMGB1P14-201ENST00000557424 TRPM4Q8TD43 1214 aa4.81□□□□□ -1.64
HMGB1P14-201ENST00000557424 DDX54Q8TDD1 881 aaKnown RBP4.81□□□□□ -1.64
HMGB1P14-201ENST00000557424 KLRG1Q96E93 195 aa4.81□□□□□ -1.64
HMGB1P14-201ENST00000557424 KRTAP4-8Q9BYQ9 185 aa4.81□□□□□ -1.64
HMGB1P14-201ENST00000557424 SRCIN1Q9C0H9 1055 aa4.81□□□□□ -1.64
HMGB1P14-201ENST00000557424 SRA1Q9HD15 236 aaKnown RBP4.81□□□□□ -1.64
HMGB1P14-201ENST00000557424 NOP53Q9NZM5 478 aaKnown RBP4.81□□□□□ -1.64
HMGB1P14-201ENST00000557424 TRAK1Q9UPV9 953 aa4.81□□□□□ -1.64
HMGB1P14-201ENST00000557424 SPG7Q9UQ90 795 aa4.81□□□□□ -1.64
HMGB1P14-201ENST00000557424 KCNMB2Q9Y691 235 aa4.81□□□□□ -1.64
HMGB1P14-201ENST00000557424 ANKRD33BA6NCL7 494 aa4.8□□□□□ -1.64
HMGB1P14-201ENST00000557424 SMARCA5O60264 1052 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P14-201ENST00000557424 TNFRSF21O75509 655 aa4.8□□□□□ -1.64
HMGB1P14-201ENST00000557424 THBS1P07996 1170 aa4.8□□□□□ -1.64
HMGB1P14-201ENST00000557424 EIF2AK2P19525 551 aaKnown RBP4.8□□□□□ -1.64
HMGB1P14-201ENST00000557424 CABP4P57796 275 aa4.8□□□□□ -1.64
HMGB1P14-201ENST00000557424 TBC1D8BQ0IIM8 1120 aa4.8□□□□□ -1.64
HMGB1P14-201ENST00000557424 GAS6Q14393 721 aa4.8□□□□□ -1.64
HMGB1P14-201ENST00000557424 EAPPQ56P03 285 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P14-201ENST00000557424 ATCAYQ86WG3 371 aa4.8□□□□□ -1.64
HMGB1P14-201ENST00000557424 NEDD1Q8NHV4 660 aa4.8□□□□□ -1.64
HMGB1P14-201ENST00000557424 GGA1Q9UJY5 639 aa4.8□□□□□ -1.64
HMGB1P14-201ENST00000557424 ERBB4Q15303 1308 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 NEURL1BA8MQ27 555 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 ZBTB39O15060 712 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 TREHO43280 583 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 OIP5O43482 229 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 EIF5BO60841 1220 aaKnown RBP4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 SASH3O75995 380 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 EPXP11678 715 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 XRCC5P13010 732 aaKnown RBP4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 GMPRP36959 345 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 CTBSQ01459 385 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 FAM117BQ6P1L5 589 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 ELMSAN1Q6PJG2 1045 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 KRT25Q7Z3Z0 450 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 TMC7Q7Z402 723 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 FAM35AQ86V20 835 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 MAP4K3Q8IVH8 894 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 SLC6A14Q9UN76 642 aa4.79□□□□□ -1.64
HMGB1P14-201ENST00000557424 LILRB5O75023 590 aa4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 PRPF40AO75400 957 aaKnown RBP4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 RGS9O75916 674 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 RECKO95980 971 aa4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 PCBP4P57723 403 aaKnown RBP4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 TRIP4Q15650 581 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 HP1BP3Q5SSJ5 553 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 ZSCAN1Q8NBB4 408 aa4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 EDARADDQ8WWZ3 215 aa4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 TTC9Q92623 222 aa4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 SCARF2Q96GP6 870 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 CSRNP1Q96S65 589 aa4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 SLC30A3Q99726 388 aa4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 IGFLR1Q9H665 355 aa4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 MRS2Q9HD23 443 aa4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 STRN4Q9NRL3 753 aa4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 CCDC87Q9NVE4 849 aa4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 DNAJB12Q9NXW2 375 aaKnown RBP4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 MKL2Q9ULH7 1088 aa4.78□□□□□ -1.64
HMGB1P14-201ENST00000557424 PPM1GO15355 546 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P14-201ENST00000557424 MMP20O60882 483 aa4.77□□□□□ -1.65
HMGB1P14-201ENST00000557424 KIF4AO95239 1232 aa4.77□□□□□ -1.65
HMGB1P14-201ENST00000557424 PTPRAP18433 802 aa4.77□□□□□ -1.65
HMGB1P14-201ENST00000557424 TARSP26639 723 aaKnown RBP4.77□□□□□ -1.65
HMGB1P14-201ENST00000557424 MAPK8P45983 427 aa4.77□□□□□ -1.65
HMGB1P14-201ENST00000557424 FMR1Q06787 632 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB1P14-201ENST00000557424 GALNT6Q8NCL4 622 aa4.77□□□□□ -1.65
HMGB1P14-201ENST00000557424 SREK1Q8WXA9 508 aaKnown RBP4.77□□□□□ -1.65
HMGB1P14-201ENST00000557424 DRC1Q96MC2 740 aa4.77□□□□□ -1.65
HMGB1P14-201ENST00000557424 RRAGCQ9HB90 399 aa4.77□□□□□ -1.65
HMGB1P14-201ENST00000557424 PRDM6Q9NQX0 595 aa4.77□□□□□ -1.65
HMGB1P14-201ENST00000557424 PPP1R1BQ9UD71 204 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P14-201ENST00000557424 LOC102724428A0A0B4J2F2 783 aa4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 EIF1AYO14602 144 aaKnown RBP4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 ARL4DP49703 201 aa4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 SIK1P57059 783 aa4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 RAC1P63000 192 aa4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 XPCQ01831 940 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 ENOX2Q16206 610 aaKnown RBP4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 PRRT3Q5FWE3 981 aa4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 RNFT1Q5M7Z0 435 aa4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 XP32Q5T750 250 aa4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 CHSY3Q70JA7 882 aa4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 FBXO33Q7Z6M2 555 aa4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 RAB44Q7Z6P3 723 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 GALNT12Q8IXK2 581 aa4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 DTWD1Q8N5C7 304 aa4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 GPR161Q8N6U8 529 aaKnown RBP4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 BEND7Q8N7W2 519 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 NIF3L1Q9GZT8 377 aa4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 ZFYVE28Q9HCC9 887 aa4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 TMEM63CQ9P1W3 806 aa4.76□□□□□ -1.65
HMGB1P14-201ENST00000557424 PNMA6FA0A0J9YX94 578 aa4.75□□□□□ -1.65
HMGB1P14-201ENST00000557424 GNB5O14775 395 aa4.75□□□□□ -1.65
HMGB1P14-201ENST00000557424 GPR182O15218 404 aa4.75□□□□□ -1.65
HMGB1P14-201ENST00000557424 GADD45BO75293 160 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P14-201ENST00000557424 LDHBP07195 334 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms