RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 ATAD2BQ9ULI0 1458 aa6.91□□□□□ -1.3
CHD8-212ENST00000557329 KIF21AQ7Z4S6 1674 aa6.9□□□□□ -1.3
CHD8-212ENST00000557329 LILRB5O75023 590 aa6.9□□□□□ -1.3
CHD8-212ENST00000557329 MPSTP25325 297 aa6.9□□□□□ -1.3
CHD8-212ENST00000557329 TARSP26639 723 aaKnown RBP6.9□□□□□ -1.3
CHD8-212ENST00000557329 PDE3BQ13370 1112 aa6.9□□□□□ -1.3
CHD8-212ENST00000557329 SPACA7Q96KW9 195 aa6.9□□□□□ -1.3
CHD8-212ENST00000557329 BAZ1AQ9NRL2 1556 aaPredicted RBP6.9□□□□□ -1.31
CHD8-212ENST00000557329 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
CHD8-212ENST00000557329 NDUFB5O43674 189 aa6.89□□□□□ -1.31
CHD8-212ENST00000557329 GHRHP01286 108 aa6.89□□□□□ -1.31
CHD8-212ENST00000557329 GRNP28799 593 aaKnown RBP6.89□□□□□ -1.31
CHD8-212ENST00000557329 ZNF438Q7Z4V0 828 aa6.89□□□□□ -1.31
CHD8-212ENST00000557329 RAB44Q7Z6P3 723 aaPredicted RBP6.89□□□□□ -1.31
CHD8-212ENST00000557329 OR13H1Q8NG92 308 aa6.89□□□□□ -1.31
CHD8-212ENST00000557329 NUDT16Q96DE0 195 aaKnown RBP6.89□□□□□ -1.31
CHD8-212ENST00000557329 SEMA6BQ9H3T3 888 aa6.89□□□□□ -1.31
CHD8-212ENST00000557329 IGFLR1Q9H665 355 aa6.89□□□□□ -1.31
CHD8-212ENST00000557329 ABI2Q9NYB9 513 aaPredicted RBP6.89□□□□□ -1.31
CHD8-212ENST00000557329 M0R082 166 aa6.88□□□□□ -1.31
CHD8-212ENST00000557329 RGS9O75916 674 aaPredicted RBP6.88□□□□□ -1.31
CHD8-212ENST00000557329 PDGFAP04085 211 aa6.88□□□□□ -1.31
CHD8-212ENST00000557329 DNM1Q05193 864 aaKnown RBP6.88□□□□□ -1.31
CHD8-212ENST00000557329 TBC1D8BQ0IIM8 1120 aa6.88□□□□□ -1.31
CHD8-212ENST00000557329 HYAL2Q12891 473 aa6.88□□□□□ -1.31
CHD8-212ENST00000557329 ELMSAN1Q6PJG2 1045 aa6.88□□□□□ -1.31
CHD8-212ENST00000557329 KRT25Q7Z3Z0 450 aa6.88□□□□□ -1.31
CHD8-212ENST00000557329 FAM35AQ86V20 835 aa6.88□□□□□ -1.31
CHD8-212ENST00000557329 MICALL1Q8N3F8 863 aa6.88□□□□□ -1.31
CHD8-212ENST00000557329 ZNF417Q8TAU3 575 aa6.88□□□□□ -1.31
CHD8-212ENST00000557329 EDEM1Q92611 657 aa6.88□□□□□ -1.31
CHD8-212ENST00000557329 ZNF587Q96SQ5 575 aaPredicted RBP6.88□□□□□ -1.31
CHD8-212ENST00000557329 BRPF3Q9ULD4 1205 aa6.88□□□□□ -1.31
CHD8-212ENST00000557329 BAZ1BQ9UIG0 1483 aaKnown RBP6.87□□□□□ -1.31
CHD8-212ENST00000557329 LOC102724428A0A0B4J2F2 783 aa6.87□□□□□ -1.31
CHD8-212ENST00000557329 H3BRB1 525 aa6.87□□□□□ -1.31
CHD8-212ENST00000557329 ZBTB39O15060 712 aa6.87□□□□□ -1.31
CHD8-212ENST00000557329 PDIA4P13667 645 aaKnown RBP6.87□□□□□ -1.31
CHD8-212ENST00000557329 SIK1P57059 783 aa6.87□□□□□ -1.31
CHD8-212ENST00000557329 PRRT3Q5FWE3 981 aa6.87□□□□□ -1.31
CHD8-212ENST00000557329 C20orf204Q6ZNR8 217 aa6.87□□□□□ -1.31
CHD8-212ENST00000557329 MUC3BQ9H195 1237 aa6.87□□□□□ -1.31
CHD8-212ENST00000557329 TUT1Q9H6E5 874 aaKnown RBP6.87□□□□□ -1.31
CHD8-212ENST00000557329 ELP3Q9H9T3 547 aa6.87□□□□□ -1.31
CHD8-212ENST00000557329 SRA1Q9HD15 236 aaKnown RBP6.87□□□□□ -1.31
CHD8-212ENST00000557329 ZFATQ9P243 1243 aa6.87□□□□□ -1.31
CHD8-212ENST00000557329 FAM177BA6PVY3 158 aa6.86□□□□□ -1.31
CHD8-212ENST00000557329 MMP20O60882 483 aa6.86□□□□□ -1.31
CHD8-212ENST00000557329 DOC2BQ14184 412 aa6.86□□□□□ -1.31
CHD8-212ENST00000557329 ZMYM1Q5SVZ6 1142 aa6.86□□□□□ -1.31
CHD8-212ENST00000557329 PSAPL1Q6NUJ1 521 aa6.86□□□□□ -1.31
CHD8-212ENST00000557329 DTWD1Q8N5C7 304 aa6.86□□□□□ -1.31
CHD8-212ENST00000557329 CARNS1A5YM72 827 aa6.85□□□□□ -1.31
CHD8-212ENST00000557329 EIF4EBP3O60516 100 aaPredicted RBP6.85□□□□□ -1.31
CHD8-212ENST00000557329 SPATA31C1P0DKV0 1188 aa6.85□□□□□ -1.31
CHD8-212ENST00000557329 SCNN1AP37088 669 aa6.85□□□□□ -1.31
CHD8-212ENST00000557329 GATA4P43694 442 aa6.85□□□□□ -1.31
CHD8-212ENST00000557329 TRIP4Q15650 581 aaPredicted RBP6.85□□□□□ -1.31
CHD8-212ENST00000557329 C8orf34Q49A92 452 aa6.85□□□□□ -1.31
CHD8-212ENST00000557329 SNX29Q8TEQ0 813 aa6.85□□□□□ -1.31
CHD8-212ENST00000557329 NACC1Q96RE7 527 aa6.85□□□□□ -1.31
CHD8-212ENST00000557329 JPH1Q9HDC5 661 aaPredicted RBP6.85□□□□□ -1.31
CHD8-212ENST00000557329 RIMBP3CA6NJZ7 1639 aa6.85□□□□□ -1.31
CHD8-212ENST00000557329 RIMBP3BA6NNM3 1639 aa6.85□□□□□ -1.31
CHD8-212ENST00000557329 RIMBP3Q9UFD9 1639 aa6.85□□□□□ -1.31
CHD8-212ENST00000557329 LAMC3Q9Y6N6 1575 aa6.85□□□□□ -1.31
CHD8-212ENST00000557329 SMNDC1O75940 238 aaKnown RBP eCLIP6.84□□□□□ -1.31
CHD8-212ENST00000557329 KIF4AO95239 1232 aa6.84□□□□□ -1.31
CHD8-212ENST00000557329 EIF2AK2P19525 551 aaKnown RBP6.84□□□□□ -1.31
CHD8-212ENST00000557329 RAC1P63000 192 aa6.84□□□□□ -1.31
CHD8-212ENST00000557329 TRIM28Q13263 835 aaKnown RBP6.84□□□□□ -1.31
CHD8-212ENST00000557329 ZNF211Q13398 564 aaPredicted RBP6.84□□□□□ -1.31
CHD8-212ENST00000557329 FAM26DQ5JW98 314 aa6.84□□□□□ -1.31
CHD8-212ENST00000557329 MAP4K3Q8IVH8 894 aa6.84□□□□□ -1.31
CHD8-212ENST00000557329 GJD3Q8N144 294 aa6.84□□□□□ -1.31
CHD8-212ENST00000557329 DMRTB1Q96MA1 342 aa6.84□□□□□ -1.31
CHD8-212ENST00000557329 POLIQ9UNA4 740 aa6.84□□□□□ -1.31
CHD8-212ENST00000557329 USP20Q9Y2K6 914 aa6.84□□□□□ -1.31
CHD8-212ENST00000557329 STARD13Q9Y3M8 1113 aa6.84□□□□□ -1.31
CHD8-212ENST00000557329 MRC2Q9UBG0 1479 aa6.84□□□□□ -1.31
CHD8-212ENST00000557329 SOWAHDA6NJG2 315 aa6.83□□□□□ -1.32
CHD8-212ENST00000557329 FZD6O60353 706 aa6.83□□□□□ -1.32
CHD8-212ENST00000557329 ALBP02768 609 aa6.83□□□□□ -1.32
CHD8-212ENST00000557329 CPB1P15086 417 aa6.83□□□□□ -1.32
CHD8-212ENST00000557329 CES1P23141 567 aa6.83□□□□□ -1.32
CHD8-212ENST00000557329 SERPINB4P48594 390 aa6.83□□□□□ -1.32
CHD8-212ENST00000557329 ATCAYQ86WG3 371 aa6.83□□□□□ -1.32
CHD8-212ENST00000557329 TRIM11Q96F44 468 aa6.83□□□□□ -1.32
CHD8-212ENST00000557329 ZBTB42B2RXF5 422 aa6.82□□□□□ -1.32
CHD8-212ENST00000557329 APBA3O96018 575 aa6.82□□□□□ -1.32
CHD8-212ENST00000557329 EDN3P14138 238 aa6.82□□□□□ -1.32
CHD8-212ENST00000557329 MTMR3Q13615 1198 aa6.82□□□□□ -1.32
CHD8-212ENST00000557329 PERM1Q5SV97 790 aa6.82□□□□□ -1.32
CHD8-212ENST00000557329 NCAPG2Q86XI2 1143 aa6.82□□□□□ -1.32
CHD8-212ENST00000557329 PLD4Q96BZ4 506 aa6.82□□□□□ -1.32
CHD8-212ENST00000557329 LPIN3Q9BQK8 851 aa6.82□□□□□ -1.32
CHD8-212ENST00000557329 PLVAPQ9BX97 442 aa6.82□□□□□ -1.32
CHD8-212ENST00000557329 HMGXB3Q12766 1538 aa6.81□□□□□ -1.32
CHD8-212ENST00000557329 PHACTR2O75167 634 aa6.81□□□□□ -1.32
CHD8-212ENST00000557329 NID1P14543 1247 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms