RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 LMOD1P29536 600 aaPredicted RBP6.81□□□□□ -1.32
SRP54-212ENST00000556992 IGF2-ASQ6U949 168 aa6.81□□□□□ -1.32
SRP54-212ENST00000556992 PROSER2Q86WR7 435 aaPredicted RBP6.81□□□□□ -1.32
SRP54-212ENST00000556992 CMTR1Q8N1G2 835 aaKnown RBP6.81□□□□□ -1.32
SRP54-212ENST00000556992 FNBP4Q8N3X1 1017 aaPredicted RBP6.81□□□□□ -1.32
SRP54-212ENST00000556992 ARXQ96QS3 562 aa6.81□□□□□ -1.32
SRP54-212ENST00000556992 RTCBQ9Y3I0 505 aaKnown RBP6.81□□□□□ -1.32
SRP54-212ENST00000556992 DLL1O00548 723 aa6.8□□□□□ -1.32
SRP54-212ENST00000556992 SSTR4P31391 388 aa6.8□□□□□ -1.32
SRP54-212ENST00000556992 PCSK7Q16549 785 aa6.8□□□□□ -1.32
SRP54-212ENST00000556992 CDCA8Q53HL2 280 aa6.8□□□□□ -1.32
SRP54-212ENST00000556992 PLD4Q96BZ4 506 aa6.8□□□□□ -1.32
SRP54-212ENST00000556992 RNF112Q9ULX5 631 aa6.8□□□□□ -1.32
SRP54-212ENST00000556992 LAMC3Q9Y6N6 1575 aa6.8□□□□□ -1.32
SRP54-212ENST00000556992 CARMIL1Q5VZK9 1371 aa6.8□□□□□ -1.32
SRP54-212ENST00000556992 CLIP1P30622 1438 aa6.79□□□□□ -1.32
SRP54-212ENST00000556992 XYLBO75191 536 aa6.79□□□□□ -1.32
SRP54-212ENST00000556992 C11orf91Q3C1V1 193 aa6.79□□□□□ -1.32
SRP54-212ENST00000556992 KRTAP19-1Q8IUB9 90 aa6.79□□□□□ -1.32
SRP54-212ENST00000556992 IL22RA1Q8N6P7 574 aa6.79□□□□□ -1.32
SRP54-212ENST00000556992 VTI1AQ96AJ9 217 aa6.79□□□□□ -1.32
SRP54-212ENST00000556992 CALR3Q96L12 384 aaKnown RBP6.79□□□□□ -1.32
SRP54-212ENST00000556992 AKTIPQ9H8T0 292 aa6.79□□□□□ -1.32
SRP54-212ENST00000556992 TLR7Q9NYK1 1049 aaKnown RBP6.79□□□□□ -1.32
SRP54-212ENST00000556992 BIVM-ERCC5R4GMW8 1640 aa6.79□□□□□ -1.32
SRP54-212ENST00000556992 RAPGEF2Q9Y4G8 1499 aa6.79□□□□□ -1.32
SRP54-212ENST00000556992 FAM196BA6NMK8 535 aa6.78□□□□□ -1.32
SRP54-212ENST00000556992 MMP20O60882 483 aa6.78□□□□□ -1.32
SRP54-212ENST00000556992 FSTP19883 344 aa6.78□□□□□ -1.32
SRP54-212ENST00000556992 WEE1P30291 646 aa6.78□□□□□ -1.32
SRP54-212ENST00000556992 NRLP54845 237 aa6.78□□□□□ -1.32
SRP54-212ENST00000556992 TREML1Q86YW5 311 aa6.78□□□□□ -1.32
SRP54-212ENST00000556992 VRTNQ9H8Y1 702 aa6.78□□□□□ -1.32
SRP54-212ENST00000556992 PCMTD2Q9NV79 361 aa6.78□□□□□ -1.32
SRP54-212ENST00000556992 TRIM33Q9UPN9 1127 aa6.78□□□□□ -1.32
SRP54-212ENST00000556992 FGD5Q6ZNL6 1462 aa6.78□□□□□ -1.32
SRP54-212ENST00000556992 LOC102724428A0A0B4J2F2 783 aa6.77□□□□□ -1.33
SRP54-212ENST00000556992 F8W735 103 aaPredicted RBP6.77□□□□□ -1.33
SRP54-212ENST00000556992 RANGAP1P46060 587 aaPredicted RBP6.77□□□□□ -1.33
SRP54-212ENST00000556992 SIK1P57059 783 aa6.77□□□□□ -1.33
SRP54-212ENST00000556992 TXNDC11Q6PKC3 985 aa6.77□□□□□ -1.33
SRP54-212ENST00000556992 DZIP1LQ8IYY4 767 aaKnown RBP6.77□□□□□ -1.33
SRP54-212ENST00000556992 TTC9Q92623 222 aa6.77□□□□□ -1.33
SRP54-212ENST00000556992 KCNMB2Q9Y691 235 aa6.77□□□□□ -1.33
SRP54-212ENST00000556992 TOPBP1Q92547 1522 aa6.76□□□□□ -1.33
SRP54-212ENST00000556992 KIF21BO75037 1637 aa6.76□□□□□ -1.33
SRP54-212ENST00000556992 FOXO3O43524 673 aa6.76□□□□□ -1.33
SRP54-212ENST00000556992 FKBP5Q13451 457 aaPredicted RBP6.76□□□□□ -1.33
SRP54-212ENST00000556992 SETDB1Q15047 1291 aa6.76□□□□□ -1.33
SRP54-212ENST00000556992 FAM26DQ5JW98 314 aa6.76□□□□□ -1.33
SRP54-212ENST00000556992 MYO19Q96H55 970 aa6.76□□□□□ -1.33
SRP54-212ENST00000556992 PRIMPOLQ96LW4 560 aa6.76□□□□□ -1.33
SRP54-212ENST00000556992 ERICH3Q5RHP9 1530 aa6.76□□□□□ -1.33
SRP54-212ENST00000556992 DNMBPQ6XZF7 1577 aa6.75□□□□□ -1.33
SRP54-212ENST00000556992 GHRHP01286 108 aa6.75□□□□□ -1.33
SRP54-212ENST00000556992 PSAPP07602 524 aa6.75□□□□□ -1.33
SRP54-212ENST00000556992 GLB1P16278 677 aa6.75□□□□□ -1.33
SRP54-212ENST00000556992 CDC25BP30305 580 aa6.75□□□□□ -1.33
SRP54-212ENST00000556992 TRIP4Q15650 581 aaPredicted RBP6.75□□□□□ -1.33
SRP54-212ENST00000556992 COX20Q5RI15 118 aa6.75□□□□□ -1.33
SRP54-212ENST00000556992 MCTP1Q6DN14 999 aa6.75□□□□□ -1.33
SRP54-212ENST00000556992 KRTAP9-9Q9BYP9 154 aa6.75□□□□□ -1.33
SRP54-212ENST00000556992 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
SRP54-212ENST00000556992 SAP130Q9H0E3 1048 aa6.75□□□□□ -1.33
SRP54-212ENST00000556992 ABCA10Q8WWZ4 1543 aa6.75□□□□□ -1.33
SRP54-212ENST00000556992 POLA1P09884 1462 aaPredicted RBP6.74□□□□□ -1.33
SRP54-212ENST00000556992 RAD54L2Q9Y4B4 1467 aa6.74□□□□□ -1.33
SRP54-212ENST00000556992 TDRD9Q8NDG6 1382 aaKnown RBP6.74□□□□□ -1.33
SRP54-212ENST00000556992 WISP1O95388 367 aa6.74□□□□□ -1.33
SRP54-212ENST00000556992 MED26O95402 600 aa6.74□□□□□ -1.33
SRP54-212ENST00000556992 COL13A1Q5TAT6 717 aaPredicted RBP6.74□□□□□ -1.33
SRP54-212ENST00000556992 ADAMTSL4Q6UY14 1074 aa6.74□□□□□ -1.33
SRP54-212ENST00000556992 ETFBKMTQ8IXQ9 262 aa6.74□□□□□ -1.33
SRP54-212ENST00000556992 GALNT11Q8NCW6 608 aa6.74□□□□□ -1.33
SRP54-212ENST00000556992 MRPL18Q9H0U6 180 aaKnown RBP6.74□□□□□ -1.33
SRP54-212ENST00000556992 WDR62O43379 1518 aa6.74□□□□□ -1.33
SRP54-212ENST00000556992 MRC2Q9UBG0 1479 aa6.73□□□□□ -1.33
SRP54-212ENST00000556992 URB2Q14146 1524 aaKnown RBP6.73□□□□□ -1.33
SRP54-212ENST00000556992 LINC01387J3KSC0 135 aa6.73□□□□□ -1.33
SRP54-212ENST00000556992 EGFRP00533 1210 aa6.73□□□□□ -1.33
SRP54-212ENST00000556992 TGFB1P01137 390 aa6.73□□□□□ -1.33
SRP54-212ENST00000556992 ZEB1P37275 1124 aaPredicted RBP6.73□□□□□ -1.33
SRP54-212ENST00000556992 ATP11AP98196 1134 aa6.73□□□□□ -1.33
SRP54-212ENST00000556992 UBL7Q96S82 380 aaPredicted RBP6.73□□□□□ -1.33
SRP54-212ENST00000556992 LACRTQ9GZZ8 138 aa6.73□□□□□ -1.33
SRP54-212ENST00000556992 PRMT3O60678 531 aa6.72□□□□□ -1.33
SRP54-212ENST00000556992 ARID4AP29374 1257 aaPredicted RBP6.72□□□□□ -1.33
SRP54-212ENST00000556992 CFAP70Q5T0N1 1121 aa6.72□□□□□ -1.33
SRP54-212ENST00000556992 CAPN12Q6ZSI9 719 aa6.72□□□□□ -1.33
SRP54-212ENST00000556992 FAM200AQ8TCP9 573 aa6.72□□□□□ -1.33
SRP54-212ENST00000556992 CARD10Q9BWT7 1032 aa6.72□□□□□ -1.33
SRP54-212ENST00000556992 KCNK4Q9NYG8 393 aa6.72□□□□□ -1.33
SRP54-212ENST00000556992 VPS8Q8N3P4 1428 aa6.72□□□□□ -1.33
SRP54-212ENST00000556992 RFX1P22670 979 aa6.71□□□□□ -1.34
SRP54-212ENST00000556992 CD97P48960 835 aa6.71□□□□□ -1.34
SRP54-212ENST00000556992 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.71□□□□□ -1.34
SRP54-212ENST00000556992 TMEM130Q8N3G9 435 aa6.71□□□□□ -1.34
SRP54-212ENST00000556992 MKNK1Q9BUB5 465 aa6.71□□□□□ -1.34
SRP54-212ENST00000556992 ARHGEF11O15085 1522 aa6.71□□□□□ -1.34
SRP54-212ENST00000556992 RIMBP3CA6NJZ7 1639 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms