RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 CAMTA1Q9Y6Y1 1673 aa8.84□□□□□ -0.99
PCNX1-211ENST00000556272 STRCQ7RTU9 1775 aa8.84□□□□□ -0.99
PCNX1-211ENST00000556272 WDHD1O75717 1129 aaPredicted RBP8.84□□□□□ -0.99
PCNX1-211ENST00000556272 NGDNQ8NEJ9 315 aaKnown RBP8.84□□□□□ -0.99
PCNX1-211ENST00000556272 OTUD7AQ8TE49 926 aaPredicted RBP8.84□□□□□ -0.99
PCNX1-211ENST00000556272 LMBRD1Q9NUN5 540 aa8.84□□□□□ -0.99
PCNX1-211ENST00000556272 NFAT5O94916 1531 aa8.83□□□□□ -1
PCNX1-211ENST00000556272 SCAMP3O14828 347 aaKnown RBP8.83□□□□□ -1
PCNX1-211ENST00000556272 CAPN15O75808 1086 aa8.83□□□□□ -1
PCNX1-211ENST00000556272 MBD3O95983 291 aa8.83□□□□□ -1
PCNX1-211ENST00000556272 HOXC9P31274 260 aa8.83□□□□□ -1
PCNX1-211ENST00000556272 PPP4CP60510 307 aa8.83□□□□□ -1
PCNX1-211ENST00000556272 MYBPC2Q14324 1141 aa8.83□□□□□ -1
PCNX1-211ENST00000556272 TAF7Q15545 349 aaPredicted RBP8.83□□□□□ -1
PCNX1-211ENST00000556272 KCNA6P17658 529 aa8.83□□□□□ -1
PCNX1-211ENST00000556272 GAS2L3Q86XJ1 694 aa8.83□□□□□ -1
PCNX1-211ENST00000556272 SSH3Q8TE77 659 aa8.83□□□□□ -1
PCNX1-211ENST00000556272 NASPP49321 788 aaPredicted RBP8.82□□□□□ -1
PCNX1-211ENST00000556272 BIRC2Q13490 618 aa8.82□□□□□ -1
PCNX1-211ENST00000556272 QPCTQ16769 361 aa8.82□□□□□ -1
PCNX1-211ENST00000556272 G2E3Q7L622 706 aa8.82□□□□□ -1
PCNX1-211ENST00000556272 FILIP1Q7Z7B0 1213 aa8.82□□□□□ -1
PCNX1-211ENST00000556272 TMC2Q8TDI7 906 aa8.82□□□□□ -1
PCNX1-211ENST00000556272 PPP1R18Q6NYC8 613 aa8.82□□□□□ -1
PCNX1-211ENST00000556272 CHMLP26374 656 aa8.81□□□□□ -1
PCNX1-211ENST00000556272 FKBP5Q13451 457 aaPredicted RBP8.81□□□□□ -1
PCNX1-211ENST00000556272 SLC4A10Q6U841 1118 aa8.81□□□□□ -1
PCNX1-211ENST00000556272 ACBD3Q9H3P7 528 aa8.81□□□□□ -1
PCNX1-211ENST00000556272 CAPN10Q9HC96 672 aa8.81□□□□□ -1
PCNX1-211ENST00000556272 DDX56Q9NY93 547 aaKnown RBP8.81□□□□□ -1
PCNX1-211ENST00000556272 HDAC5Q9UQL6 1122 aa8.81□□□□□ -1
PCNX1-211ENST00000556272 ADAMTS7Q9UKP4 1686 aa8.81□□□□□ -1
PCNX1-211ENST00000556272 USP42Q9H9J4 1324 aaKnown RBP8.81□□□□□ -1
PCNX1-211ENST00000556272 FOXO3O43524 673 aa8.81□□□□□ -1
PCNX1-211ENST00000556272 MCTP1Q6DN14 999 aa8.81□□□□□ -1
PCNX1-211ENST00000556272 NAP1L2Q9ULW6 460 aaPredicted RBP8.81□□□□□ -1
PCNX1-211ENST00000556272 AP1G2O75843 785 aa8.81□□□□□ -1
PCNX1-211ENST00000556272 UBTFL1P0CB47 393 aaPredicted RBP8.81□□□□□ -1
PCNX1-211ENST00000556272 BRINP2Q9C0B6 783 aa8.81□□□□□ -1
PCNX1-211ENST00000556272 PLEKHG2Q9H7P9 1386 aa8.8□□□□□ -1
PCNX1-211ENST00000556272 STRCP1A6NGW2 1772 aa8.8□□□□□ -1
PCNX1-211ENST00000556272 PPP1R3GB7ZBB8 358 aa8.8□□□□□ -1
PCNX1-211ENST00000556272 F6X3S4 739 aa8.8□□□□□ -1
PCNX1-211ENST00000556272 RINLQ6ZS11 566 aa8.8□□□□□ -1
PCNX1-211ENST00000556272 SIPA1L3O60292 1781 aaPredicted RBP8.8□□□□□ -1
PCNX1-211ENST00000556272 HMGB1P1B2RPK0 211 aaPredicted RBP8.8□□□□□ -1
PCNX1-211ENST00000556272 USP17L8P0C7I0 530 aa8.8□□□□□ -1
PCNX1-211ENST00000556272 DNAJA1P31689 397 aaKnown RBP8.8□□□□□ -1
PCNX1-211ENST00000556272 ZSCAN23Q3MJ62 389 aa8.8□□□□□ -1
PCNX1-211ENST00000556272 TMX3Q96JJ7 454 aa8.8□□□□□ -1
PCNX1-211ENST00000556272 SLIT3O75094 1523 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 EXOC5O00471 708 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 TERF1P54274 439 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 ZSCAN30Q86W11 494 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 IL17REQ8NFR9 667 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 SYAP1Q96A49 352 aaPredicted RBP8.79□□□□□ -1
PCNX1-211ENST00000556272 PDLIM2Q96JY6 352 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 USP44Q9H0E7 712 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 HMX1Q9NP08 348 aaPredicted RBP8.79□□□□□ -1
PCNX1-211ENST00000556272 NOVA2Q9UNW9 492 aaKnown RBP8.79□□□□□ -1
PCNX1-211ENST00000556272 EXOC6BQ9Y2D4 811 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 ZDHHC9Q9Y397 364 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 TTC41PQ6P2S7 1318 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 ABCC6O95255 1503 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 PNMA6EA0A0J9YXQ4 647 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 MCM5P33992 734 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 NEK4P51957 841 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 MTX1Q13505 466 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 ELOAQ14241 798 aaKnown RBP8.79□□□□□ -1
PCNX1-211ENST00000556272 CSPP1Q1MSJ5 1256 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 ZNF710Q8N1W2 664 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 IP6K1Q92551 441 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 KIF1BPQ96EK5 621 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 FAM161BQ96MY7 647 aa8.79□□□□□ -1
PCNX1-211ENST00000556272 HSPA4P34932 840 aa8.78□□□□□ -1
PCNX1-211ENST00000556272 RBL2Q08999 1139 aa8.78□□□□□ -1
PCNX1-211ENST00000556272 LRSAM1Q6UWE0 723 aa8.78□□□□□ -1
PCNX1-211ENST00000556272 PRM3Q9NNZ6 103 aa8.78□□□□□ -1
PCNX1-211ENST00000556272 MIS18AQ9NYP9 233 aa8.78□□□□□ -1
PCNX1-211ENST00000556272 LRRFIP2Q9Y608 721 aaKnown RBP8.78□□□□□ -1
PCNX1-211ENST00000556272 S100BP04271 92 aaPredicted RBP8.78□□□□□ -1
PCNX1-211ENST00000556272 PTMAP06454 111 aaKnown RBP8.78□□□□□ -1
PCNX1-211ENST00000556272 ZGPATQ8N5A5 531 aaKnown RBP8.78□□□□□ -1
PCNX1-211ENST00000556272 KCNH5Q8NCM2 988 aa8.78□□□□□ -1
PCNX1-211ENST00000556272 JDP2Q8WYK2 163 aa8.78□□□□□ -1
PCNX1-211ENST00000556272 COMMD10Q9Y6G5 202 aa8.78□□□□□ -1
PCNX1-211ENST00000556272 RAD50Q92878 1312 aa8.77□□□□□ -1
PCNX1-211ENST00000556272 WDR33Q9C0J8 1336 aaKnown RBP8.77□□□□□ -1
PCNX1-211ENST00000556272 PHF14O94880 888 aa8.77□□□□□ -1
PCNX1-211ENST00000556272 TPM2P07951 284 aa8.77□□□□□ -1
PCNX1-211ENST00000556272 TMEM87AQ8NBN3 555 aa8.77□□□□□ -1
PCNX1-211ENST00000556272 NDUFB9Q9Y6M9 179 aa8.77□□□□□ -1
PCNX1-211ENST00000556272 MST1RQ04912 1400 aa8.77□□□□□ -1.01
PCNX1-211ENST00000556272 HSD3B2P26439 372 aa8.77□□□□□ -1.01
PCNX1-211ENST00000556272 MAP9Q49MG5 647 aa8.77□□□□□ -1.01
PCNX1-211ENST00000556272 CAVIN1Q6NZI2 390 aaKnown RBP8.77□□□□□ -1.01
PCNX1-211ENST00000556272 CNTROBQ8N137 903 aa8.77□□□□□ -1.01
PCNX1-211ENST00000556272 RBM33Q96EV2 1170 aaKnown RBP8.77□□□□□ -1.01
PCNX1-211ENST00000556272 TMX4Q9H1E5 349 aaPredicted RBP8.77□□□□□ -1.01
PCNX1-211ENST00000556272 NRBP1Q9UHY1 535 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms