RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 DACH1Q9UI36 760 aa9.62□□□□□ -0.87
ATXN3-236ENST00000556220 N4BP2Q86UW6 1770 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-236ENST00000556220 J3QL48 77 aa9.61□□□□□ -0.87
ATXN3-236ENST00000556220 TRIM66O15016 1216 aa9.61□□□□□ -0.87
ATXN3-236ENST00000556220 CCNYL3P0C7X3 344 aa9.61□□□□□ -0.87
ATXN3-236ENST00000556220 MTMR2Q13614 643 aa9.61□□□□□ -0.87
ATXN3-236ENST00000556220 DESI1Q6ICB0 168 aa9.61□□□□□ -0.87
ATXN3-236ENST00000556220 PTCRAQ6ISU1 281 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-236ENST00000556220 SIN3AQ96ST3 1273 aa9.61□□□□□ -0.87
ATXN3-236ENST00000556220 GGNBP2Q9H3C7 697 aa9.61□□□□□ -0.87
ATXN3-236ENST00000556220 MKRN1Q9UHC7 482 aaKnown RBP9.61□□□□□ -0.87
ATXN3-236ENST00000556220 KIAA1551Q9HCM1 1747 aa9.61□□□□□ -0.87
ATXN3-236ENST00000556220 CNTNAP4Q9C0A0 1308 aa9.6□□□□□ -0.87
ATXN3-236ENST00000556220 PHKG2P15735 406 aa9.6□□□□□ -0.87
ATXN3-236ENST00000556220 CTCFP49711 727 aaPredicted RBP9.6□□□□□ -0.87
ATXN3-236ENST00000556220 RASSF7Q02833 373 aa9.6□□□□□ -0.87
ATXN3-236ENST00000556220 PARP9Q8IXQ6 854 aa9.6□□□□□ -0.87
ATXN3-236ENST00000556220 IFNL2Q8IZJ0 200 aa9.6□□□□□ -0.87
ATXN3-236ENST00000556220 EVA1BQ9NVM1 165 aa9.6□□□□□ -0.87
ATXN3-236ENST00000556220 MAP2P11137 1827 aaKnown RBP9.6□□□□□ -0.87
ATXN3-236ENST00000556220 RGPD2P0DJD1 1756 aa9.6□□□□□ -0.87
ATXN3-236ENST00000556220 DDR1Q08345 913 aa9.59□□□□□ -0.87
ATXN3-236ENST00000556220 NEUROD1Q13562 356 aa9.59□□□□□ -0.87
ATXN3-236ENST00000556220 PRR7Q8TB68 274 aa9.59□□□□□ -0.87
ATXN3-236ENST00000556220 TBC1D2Q9BYX2 928 aa9.59□□□□□ -0.87
ATXN3-236ENST00000556220 SRP68Q9UHB9 627 aaKnown RBP9.59□□□□□ -0.87
ATXN3-236ENST00000556220 FLT4P35916 1363 aa9.59□□□□□ -0.87
ATXN3-236ENST00000556220 KIF24Q5T7B8 1368 aa9.59□□□□□ -0.87
ATXN3-236ENST00000556220 KDM6AO15550 1401 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-236ENST00000556220 POLRMTO00411 1230 aaKnown RBP9.58□□□□□ -0.88
ATXN3-236ENST00000556220 TM4SF1P30408 202 aa9.58□□□□□ -0.88
ATXN3-236ENST00000556220 AIDAQ96BJ3 306 aa9.58□□□□□ -0.88
ATXN3-236ENST00000556220 GMPR2Q9P2T1 348 aaKnown RBP9.58□□□□□ -0.88
ATXN3-236ENST00000556220 KDRP35968 1356 aa9.58□□□□□ -0.88
ATXN3-236ENST00000556220 ERVV-2B6SEH9 535 aa9.57□□□□□ -0.88
ATXN3-236ENST00000556220 RSBN1LQ6PCB5 846 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-236ENST00000556220 ABHD8Q96I13 439 aa9.57□□□□□ -0.88
ATXN3-236ENST00000556220 CNTNAP1P78357 1384 aa9.57□□□□□ -0.88
ATXN3-236ENST00000556220 TONSLQ96HA7 1378 aa9.57□□□□□ -0.88
ATXN3-236ENST00000556220 USP42Q9H9J4 1324 aaKnown RBP9.56□□□□□ -0.88
ATXN3-236ENST00000556220 C4AP0C0L4 1744 aa9.56□□□□□ -0.88
ATXN3-236ENST00000556220 ITGB4P16144 1822 aa9.56□□□□□ -0.88
ATXN3-236ENST00000556220 ARFGEF1Q9Y6D6 1849 aa9.56□□□□□ -0.88
ATXN3-236ENST00000556220 TNRC6CQ9HCJ0 1690 aaKnown RBP9.56□□□□□ -0.88
ATXN3-236ENST00000556220 SIAH2O43255 324 aa9.56□□□□□ -0.88
ATXN3-236ENST00000556220 RGS19P49795 217 aa9.56□□□□□ -0.88
ATXN3-236ENST00000556220 LBX1P52954 281 aa9.56□□□□□ -0.88
ATXN3-236ENST00000556220 KCNH2Q12809 1159 aa9.56□□□□□ -0.88
ATXN3-236ENST00000556220 TTLL6Q8N841 843 aa9.56□□□□□ -0.88
ATXN3-236ENST00000556220 EHBP1Q8NDI1 1231 aa9.56□□□□□ -0.88
ATXN3-236ENST00000556220 HPS1Q92902 700 aa9.56□□□□□ -0.88
ATXN3-236ENST00000556220 TESK2Q96S53 571 aa9.56□□□□□ -0.88
ATXN3-236ENST00000556220 EMILIN1Q9Y6C2 1016 aa9.56□□□□□ -0.88
ATXN3-236ENST00000556220 NCAPD2Q15021 1401 aa9.56□□□□□ -0.88
ATXN3-236ENST00000556220 BRCA1P38398 1863 aaKnown RBP9.55□□□□□ -0.88
ATXN3-236ENST00000556220 NFKBIEO00221 500 aa9.55□□□□□ -0.88
ATXN3-236ENST00000556220 SPTLC1O15269 473 aa9.55□□□□□ -0.88
ATXN3-236ENST00000556220 ALDH1A1P00352 501 aa9.55□□□□□ -0.88
ATXN3-236ENST00000556220 CRKLP46109 303 aaKnown RBP9.55□□□□□ -0.88
ATXN3-236ENST00000556220 VEGFBP49765 207 aa9.55□□□□□ -0.88
ATXN3-236ENST00000556220 SH3BP2P78314 561 aa9.55□□□□□ -0.88
ATXN3-236ENST00000556220 MLLT1Q03111 559 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-236ENST00000556220 UNC93B1Q9H1C4 597 aa9.55□□□□□ -0.88
ATXN3-236ENST00000556220 ATP13A2Q9NQ11 1180 aa9.55□□□□□ -0.88
ATXN3-236ENST00000556220 SBF1O95248 1867 aa9.55□□□□□ -0.88
ATXN3-236ENST00000556220 PKD1L3Q7Z443 1732 aa9.54□□□□□ -0.88
ATXN3-236ENST00000556220 ST20-MTHFSA0A0A6YYL1 179 aa9.54□□□□□ -0.88
ATXN3-236ENST00000556220 HSP90AB1P08238 724 aaKnown RBP9.54□□□□□ -0.88
ATXN3-236ENST00000556220 TREML4Q6UXN2 200 aa9.54□□□□□ -0.88
ATXN3-236ENST00000556220 SENP2Q9HC62 589 aa9.54□□□□□ -0.88
ATXN3-236ENST00000556220 WASHC2AQ641Q2 1341 aa9.54□□□□□ -0.88
ATXN3-236ENST00000556220 PASKQ96RG2 1323 aa9.54□□□□□ -0.88
ATXN3-236ENST00000556220 TMEM88BA6NKF7 163 aa9.53□□□□□ -0.88
ATXN3-236ENST00000556220 PPM1GO15355 546 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-236ENST00000556220 PTCD1O75127 700 aaKnown RBP9.53□□□□□ -0.88
ATXN3-236ENST00000556220 HSPA8P11142 646 aaKnown RBP9.53□□□□□ -0.88
ATXN3-236ENST00000556220 ERFEQ4G0M1 354 aa9.53□□□□□ -0.88
ATXN3-236ENST00000556220 PRPF38BQ5VTL8 546 aaKnown RBP9.53□□□□□ -0.88
ATXN3-236ENST00000556220 USPL1Q5W0Q7 1092 aa9.53□□□□□ -0.88
ATXN3-236ENST00000556220 INTS5Q6P9B9 1019 aaKnown RBP9.53□□□□□ -0.88
ATXN3-236ENST00000556220 PCDHB15Q9Y5E8 787 aa9.53□□□□□ -0.88
ATXN3-236ENST00000556220 CABP4P57796 275 aa9.52□□□□□ -0.89
ATXN3-236ENST00000556220 NFIXQ14938 502 aa9.52□□□□□ -0.89
ATXN3-236ENST00000556220 LYPD8Q6UX82 237 aa9.52□□□□□ -0.89
ATXN3-236ENST00000556220 RIC3Q7Z5B4 369 aa9.52□□□□□ -0.89
ATXN3-236ENST00000556220 C2CD5Q86YS7 1000 aa9.52□□□□□ -0.89
ATXN3-236ENST00000556220 ZBTB3Q9H5J0 574 aa9.52□□□□□ -0.89
ATXN3-236ENST00000556220 CCDC85CA6NKD9 419 aa9.51□□□□□ -0.89
ATXN3-236ENST00000556220 H0YIN7 160 aa9.51□□□□□ -0.89
ATXN3-236ENST00000556220 DDNO94850 711 aaPredicted RBP9.51□□□□□ -0.89
ATXN3-236ENST00000556220 SERPINB2P05120 415 aa9.51□□□□□ -0.89
ATXN3-236ENST00000556220 MAP2K1Q02750 393 aaPredicted RBP9.51□□□□□ -0.89
ATXN3-236ENST00000556220 PDE4DQ08499 809 aa9.51□□□□□ -0.89
ATXN3-236ENST00000556220 LDHDQ86WU2 507 aa9.51□□□□□ -0.89
ATXN3-236ENST00000556220 BAP1Q92560 729 aa9.51□□□□□ -0.89
ATXN3-236ENST00000556220 DEFB115Q30KQ5 88 aa9.5□□□□□ -0.89
ATXN3-236ENST00000556220 PLEKHO1Q53GL0 409 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-236ENST00000556220 LCE2AQ5TA79 106 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-236ENST00000556220 TRIM47Q96LD4 638 aa9.5□□□□□ -0.89
ATXN3-236ENST00000556220 WASF2Q9Y6W5 498 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms