RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 GREM2Q9H772 168 aa11.91□□□□□ -0.5
PRKCH-211ENST00000555082 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.91□□□□□ -0.5
PRKCH-211ENST00000555082 RAB11FIP3O75154 756 aa11.91□□□□□ -0.5
PRKCH-211ENST00000555082 RC3H1Q5TC82 1133 aaKnown RBP11.91□□□□□ -0.5
PRKCH-211ENST00000555082 EAF2Q96CJ1 260 aaPredicted RBP11.91□□□□□ -0.5
PRKCH-211ENST00000555082 CWC22Q9HCG8 908 aaKnown RBP11.91□□□□□ -0.5
PRKCH-211ENST00000555082 MX1P20591 662 aa11.9□□□□□ -0.5
PRKCH-211ENST00000555082 TFCP2Q12800 502 aa11.9□□□□□ -0.5
PRKCH-211ENST00000555082 CCDC39Q9UFE4 941 aa11.9□□□□□ -0.5
PRKCH-211ENST00000555082 SALL3Q9BXA9 1300 aa11.9□□□□□ -0.5
PRKCH-211ENST00000555082 TERF1P54274 439 aa11.9□□□□□ -0.5
PRKCH-211ENST00000555082 AACSQ86V21 672 aa11.9□□□□□ -0.5
PRKCH-211ENST00000555082 UTP14AQ9BVJ6 771 aaKnown RBP11.9□□□□□ -0.5
PRKCH-211ENST00000555082 COPRSQ9NQ92 184 aa11.9□□□□□ -0.5
PRKCH-211ENST00000555082 ZPR1O75312 459 aa11.9□□□□□ -0.51
PRKCH-211ENST00000555082 TRAPPC3LQ5T215 181 aa11.9□□□□□ -0.51
PRKCH-211ENST00000555082 C3orf67Q6ZVT6 689 aa11.9□□□□□ -0.51
PRKCH-211ENST00000555082 TTLL11Q8NHH1 800 aa11.9□□□□□ -0.51
PRKCH-211ENST00000555082 NARFQ9UHQ1 456 aa11.9□□□□□ -0.51
PRKCH-211ENST00000555082 ZHX1Q9UKY1 873 aaPredicted RBP11.9□□□□□ -0.51
PRKCH-211ENST00000555082 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.9□□□□□ -0.51
PRKCH-211ENST00000555082 COL5A3P25940 1745 aaPredicted RBP11.89□□□□□ -0.51
PRKCH-211ENST00000555082 NTSR2O95665 410 aa11.89□□□□□ -0.51
PRKCH-211ENST00000555082 RFC4P35249 363 aa11.89□□□□□ -0.51
PRKCH-211ENST00000555082 CASC1Q6TDU7 716 aa11.89□□□□□ -0.51
PRKCH-211ENST00000555082 SASS6Q6UVJ0 657 aa11.89□□□□□ -0.51
PRKCH-211ENST00000555082 TMX3Q96JJ7 454 aa11.89□□□□□ -0.51
PRKCH-211ENST00000555082 SH3TC1Q8TE82 1336 aa11.89□□□□□ -0.51
PRKCH-211ENST00000555082 GADD45BO75293 160 aaPredicted RBP11.89□□□□□ -0.51
PRKCH-211ENST00000555082 CTSWP56202 376 aa11.89□□□□□ -0.51
PRKCH-211ENST00000555082 ZNF827Q17R98 1081 aa11.89□□□□□ -0.51
PRKCH-211ENST00000555082 CSPP1Q1MSJ5 1256 aa11.89□□□□□ -0.51
PRKCH-211ENST00000555082 ERFEQ4G0M1 354 aa11.89□□□□□ -0.51
PRKCH-211ENST00000555082 SEC31BQ9NQW1 1179 aa11.89□□□□□ -0.51
PRKCH-211ENST00000555082 DTNBO60941 627 aa11.88□□□□□ -0.51
PRKCH-211ENST00000555082 CCDC57Q2TAC2 916 aa11.88□□□□□ -0.51
PRKCH-211ENST00000555082 HSP90AB4PQ58FF6 505 aa11.88□□□□□ -0.51
PRKCH-211ENST00000555082 ATG9AQ7Z3C6 839 aa11.88□□□□□ -0.51
PRKCH-211ENST00000555082 CLASRPQ8N2M8 674 aaKnown RBP11.88□□□□□ -0.51
PRKCH-211ENST00000555082 MAP7D2Q96T17 732 aa11.88□□□□□ -0.51
PRKCH-211ENST00000555082 NUP98P52948 1817 aa11.88□□□□□ -0.51
PRKCH-211ENST00000555082 ITGA6P23229 1130 aa11.88□□□□□ -0.51
PRKCH-211ENST00000555082 TSPY26PQ9H489 355 aa11.88□□□□□ -0.51
PRKCH-211ENST00000555082 ZNF652Q9Y2D9 606 aa11.88□□□□□ -0.51
PRKCH-211ENST00000555082 DYNC1I1O14576 645 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 CSF1RP07333 972 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 RILPL2Q969X0 211 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 NDUFB9Q9Y6M9 179 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 CDHR2Q9BYE9 1310 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 TRIM6-TRIM34B2RNG4 842 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 ERC2O15083 957 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 PDE8AO60658 829 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 IFIT2P09913 472 aaKnown RBP11.87□□□□□ -0.51
PRKCH-211ENST00000555082 EN1Q05925 392 aaPredicted RBP11.87□□□□□ -0.51
PRKCH-211ENST00000555082 IFIT5Q13325 482 aaKnown RBP11.87□□□□□ -0.51
PRKCH-211ENST00000555082 TAF7LQ5H9L4 462 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 RREB1Q92766 1687 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 REC8O95072 547 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 GTF2E1P29083 439 aaPredicted RBP11.87□□□□□ -0.51
PRKCH-211ENST00000555082 TIMM10P62072 90 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 PLCB2Q00722 1185 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 PI4K2BQ8TCG2 481 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 PLA2G12BQ9BX93 195 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 PALD1Q9ULE6 856 aa11.87□□□□□ -0.51
PRKCH-211ENST00000555082 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
PRKCH-211ENST00000555082 SNAP23O00161 211 aa11.86□□□□□ -0.51
PRKCH-211ENST00000555082 PARP10Q53GL7 1025 aa11.86□□□□□ -0.51
PRKCH-211ENST00000555082 SLC27A3Q5K4L6 730 aa11.86□□□□□ -0.51
PRKCH-211ENST00000555082 CLEC4GQ6UXB4 293 aa11.86□□□□□ -0.51
PRKCH-211ENST00000555082 UPF3BQ9BZI7 483 aaKnown RBP11.86□□□□□ -0.51
PRKCH-211ENST00000555082 TTC12Q9H892 705 aaPredicted RBP11.86□□□□□ -0.51
PRKCH-211ENST00000555082 TFCP2L1Q9NZI6 479 aa11.86□□□□□ -0.51
PRKCH-211ENST00000555082 EYA2O00167 538 aa11.86□□□□□ -0.51
PRKCH-211ENST00000555082 C4BP0C0L5 1744 aa11.86□□□□□ -0.51
PRKCH-211ENST00000555082 KIAA2012Q0VF49 1180 aa11.86□□□□□ -0.51
PRKCH-211ENST00000555082 EZH2Q15910 746 aaKnown RBP11.86□□□□□ -0.51
PRKCH-211ENST00000555082 ERC1Q8IUD2 1116 aa11.86□□□□□ -0.51
PRKCH-211ENST00000555082 HELBQ8NG08 1087 aaPredicted RBP11.86□□□□□ -0.51
PRKCH-211ENST00000555082 SETDB2Q96T68 719 aa11.86□□□□□ -0.51
PRKCH-211ENST00000555082 DBNDD2Q9BQY9 259 aa11.86□□□□□ -0.51
PRKCH-211ENST00000555082 USP25Q9UHP3 1055 aa11.86□□□□□ -0.51
PRKCH-211ENST00000555082 LY75O60449 1722 aa11.85□□□□□ -0.51
PRKCH-211ENST00000555082 NFIXQ14938 502 aa11.85□□□□□ -0.51
PRKCH-211ENST00000555082 TNNI3KQ59H18 835 aa11.85□□□□□ -0.51
PRKCH-211ENST00000555082 SLC51AQ86UW1 340 aa11.85□□□□□ -0.51
PRKCH-211ENST00000555082 NBPF5PQ86XG9 351 aaPredicted RBP11.85□□□□□ -0.51
PRKCH-211ENST00000555082 NEUROD6Q96NK8 337 aa11.85□□□□□ -0.51
PRKCH-211ENST00000555082 OSBPL3Q9H4L5 887 aa11.85□□□□□ -0.51
PRKCH-211ENST00000555082 DBNLQ9UJU6 430 aaKnown RBP11.85□□□□□ -0.51
PRKCH-211ENST00000555082 FPGT-TNNI3KV9GXZ4 949 aa11.85□□□□□ -0.51
PRKCH-211ENST00000555082 ABCC12Q96J65 1359 aa11.85□□□□□ -0.51
PRKCH-211ENST00000555082 DEFB132Q7Z7B7 95 aa11.85□□□□□ -0.51
PRKCH-211ENST00000555082 EDC3Q96F86 508 aaKnown RBP11.85□□□□□ -0.51
PRKCH-211ENST00000555082 LARP6Q9BRS8 491 aaKnown RBP11.85□□□□□ -0.51
PRKCH-211ENST00000555082 STAP2Q9UGK3 403 aa11.85□□□□□ -0.51
PRKCH-211ENST00000555082 CICQ96RK0 1608 aaPredicted RBP11.85□□□□□ -0.51
PRKCH-211ENST00000555082 MBD3O95983 291 aa11.84□□□□□ -0.51
PRKCH-211ENST00000555082 LDHAL6AQ6ZMR3 332 aa11.84□□□□□ -0.51
PRKCH-211ENST00000555082 BOLA2Q9H3K6 86 aa11.84□□□□□ -0.51
PRKCH-211ENST00000555082 ANKRD18BA2A2Z9 1011 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms