RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 SCARF1Q14162 830 aa17.7■□□□□ 0.42
XRCC3-211ENST00000555055 SMIM5Q71RC9 77 aa17.7■□□□□ 0.42
XRCC3-211ENST00000555055 PAG1Q9NWQ8 432 aa17.7■□□□□ 0.42
XRCC3-211ENST00000555055 SMC3Q9UQE7 1217 aa17.7■□□□□ 0.42
XRCC3-211ENST00000555055 TCHHQ07283 1943 aa17.7■□□□□ 0.42
XRCC3-211ENST00000555055 EP400Q96L91 3159 aa17.69■□□□□ 0.42
XRCC3-211ENST00000555055 IL15P40933 162 aaPredicted RBP17.69■□□□□ 0.42
XRCC3-211ENST00000555055 TMEM63CQ9P1W3 806 aa17.69■□□□□ 0.42
XRCC3-211ENST00000555055 SNAP23O00161 211 aa17.69■□□□□ 0.42
XRCC3-211ENST00000555055 EPB41L2O43491 1005 aaKnown RBP17.69■□□□□ 0.42
XRCC3-211ENST00000555055 IFIT1P09914 478 aaKnown RBP17.69■□□□□ 0.42
XRCC3-211ENST00000555055 ZKSCAN5Q9Y2L8 839 aa17.69■□□□□ 0.42
XRCC3-211ENST00000555055 MAP3K15Q6ZN16 1313 aa17.69■□□□□ 0.42
XRCC3-211ENST00000555055 BCL9O00512 1426 aa17.69■□□□□ 0.42
XRCC3-211ENST00000555055 CNPY2Q9Y2B0 182 aa17.68■□□□□ 0.42
XRCC3-211ENST00000555055 CYP21A2P08686 494 aa17.68■□□□□ 0.42
XRCC3-211ENST00000555055 BLOC1S2Q6QNY1 142 aa17.68■□□□□ 0.42
XRCC3-211ENST00000555055 GIGYF2Q6Y7W6 1299 aaKnown RBP17.68■□□□□ 0.42
XRCC3-211ENST00000555055 NLRP10Q86W26 655 aa17.68■□□□□ 0.42
XRCC3-211ENST00000555055 CEP126Q9P2H0 1117 aa17.68■□□□□ 0.42
XRCC3-211ENST00000555055 GORABQ5T7V8 394 aa17.67■□□□□ 0.42
XRCC3-211ENST00000555055 KBTBD3Q8NAB2 608 aa17.67■□□□□ 0.42
XRCC3-211ENST00000555055 HELBQ8NG08 1087 aaPredicted RBP17.67■□□□□ 0.42
XRCC3-211ENST00000555055 RBSNQ9H1K0 784 aa17.67■□□□□ 0.42
XRCC3-211ENST00000555055 TRMT112Q9UI30 125 aaKnown RBP17.67■□□□□ 0.42
XRCC3-211ENST00000555055 DISP2A7MBM2 1401 aa17.67■□□□□ 0.42
XRCC3-211ENST00000555055 SYCE3A1L190 88 aa17.67■□□□□ 0.42
XRCC3-211ENST00000555055 VPS37CA5D8V6 355 aaPredicted RBP17.67■□□□□ 0.42
XRCC3-211ENST00000555055 KCNQ2O43526 872 aa17.67■□□□□ 0.42
XRCC3-211ENST00000555055 FAM173BQ6P4H8 233 aa17.67■□□□□ 0.42
XRCC3-211ENST00000555055 CHST3Q7LGC8 479 aa17.67■□□□□ 0.42
XRCC3-211ENST00000555055 FERMT3Q86UX7 667 aa17.67■□□□□ 0.42
XRCC3-211ENST00000555055 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.67■□□□□ 0.42
XRCC3-211ENST00000555055 ITGA6P23229 1130 aa17.66■□□□□ 0.42
XRCC3-211ENST00000555055 IFIT5Q13325 482 aaKnown RBP17.66■□□□□ 0.42
XRCC3-211ENST00000555055 MCMDC2Q4G0Z9 681 aa17.66■□□□□ 0.42
XRCC3-211ENST00000555055 DZIP3Q86Y13 1208 aaKnown RBP17.66■□□□□ 0.42
XRCC3-211ENST00000555055 ZBTB38Q8NAP3 1195 aaPredicted RBP17.66■□□□□ 0.42
XRCC3-211ENST00000555055 KCNB2Q92953 911 aa17.66■□□□□ 0.42
XRCC3-211ENST00000555055 XAGE2Q96GT9 111 aa17.66■□□□□ 0.42
XRCC3-211ENST00000555055 UBN2Q6ZU65 1347 aa17.66■□□□□ 0.42
XRCC3-211ENST00000555055 DYNC1I1O14576 645 aa17.66■□□□□ 0.42
XRCC3-211ENST00000555055 STX6O43752 255 aa17.66■□□□□ 0.42
XRCC3-211ENST00000555055 TOB2Q14106 344 aaPredicted RBP17.66■□□□□ 0.42
XRCC3-211ENST00000555055 DDB1Q16531 1140 aa17.66■□□□□ 0.42
XRCC3-211ENST00000555055 LRSAM1Q6UWE0 723 aa17.66■□□□□ 0.42
XRCC3-211ENST00000555055 USP48Q86UV5 1035 aa17.66■□□□□ 0.42
XRCC3-211ENST00000555055 CCDC39Q9UFE4 941 aa17.66■□□□□ 0.42
XRCC3-211ENST00000555055 COL16A1Q07092 1604 aaPredicted RBP17.65■□□□□ 0.42
XRCC3-211ENST00000555055 MBD3O95983 291 aa17.65■□□□□ 0.42
XRCC3-211ENST00000555055 PCCAP05165 728 aaPredicted RBP17.65■□□□□ 0.42
XRCC3-211ENST00000555055 HCLS1P14317 486 aaPredicted RBP17.65■□□□□ 0.42
XRCC3-211ENST00000555055 TTLL5Q6EMB2 1281 aa17.65■□□□□ 0.42
XRCC3-211ENST00000555055 STOX1Q6ZVD7 989 aa17.65■□□□□ 0.42
XRCC3-211ENST00000555055 PODXL2Q9NZ53 605 aa17.65■□□□□ 0.42
XRCC3-211ENST00000555055 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.65■□□□□ 0.42
XRCC3-211ENST00000555055 IRS4O14654 1257 aaPredicted RBP17.65■□□□□ 0.42
XRCC3-211ENST00000555055 FIBPO43427 364 aa17.65■□□□□ 0.42
XRCC3-211ENST00000555055 MARCH10Q8NA82 808 aaPredicted RBP17.65■□□□□ 0.42
XRCC3-211ENST00000555055 WDR33Q9C0J8 1336 aaKnown RBP17.64■□□□□ 0.41
XRCC3-211ENST00000555055 RPS6KB1P23443 525 aa17.64■□□□□ 0.41
XRCC3-211ENST00000555055 LDHAL6AQ6ZMR3 332 aa17.64■□□□□ 0.41
XRCC3-211ENST00000555055 TTLL11Q8NHH1 800 aa17.64■□□□□ 0.41
XRCC3-211ENST00000555055 M0R2C6 588 aa17.64■□□□□ 0.41
XRCC3-211ENST00000555055 ATP6V1AP38606 617 aa17.64■□□□□ 0.41
XRCC3-211ENST00000555055 FOSBP53539 338 aa17.64■□□□□ 0.41
XRCC3-211ENST00000555055 RNF20Q5VTR2 975 aa17.64■□□□□ 0.41
XRCC3-211ENST00000555055 TEX13AQ9BXU3 409 aaPredicted RBP17.64■□□□□ 0.41
XRCC3-211ENST00000555055 TM6SF1Q9BZW5 370 aa17.64■□□□□ 0.41
XRCC3-211ENST00000555055 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.64■□□□□ 0.41
XRCC3-211ENST00000555055 ZSCAN22P10073 491 aaPredicted RBP17.63■□□□□ 0.41
XRCC3-211ENST00000555055 ZAP70P43403 619 aa17.63■□□□□ 0.41
XRCC3-211ENST00000555055 METTL24Q5JXM2 366 aa17.63■□□□□ 0.41
XRCC3-211ENST00000555055 TTC39AQ5SRH9 613 aa17.63■□□□□ 0.41
XRCC3-211ENST00000555055 HAND2P61296 217 aa17.63■□□□□ 0.41
XRCC3-211ENST00000555055 JAK2O60674 1132 aa17.62■□□□□ 0.41
XRCC3-211ENST00000555055 FAM182BQ5T319 152 aa17.62■□□□□ 0.41
XRCC3-211ENST00000555055 PTF1AQ7RTS3 328 aa17.62■□□□□ 0.41
XRCC3-211ENST00000555055 OSBP2Q969R2 916 aa17.62■□□□□ 0.41
XRCC3-211ENST00000555055 CNNM1Q9NRU3 951 aa17.62■□□□□ 0.41
XRCC3-211ENST00000555055 MAST3O60307 1309 aa17.62■□□□□ 0.41
XRCC3-211ENST00000555055 PSMA5P28066 241 aa17.62■□□□□ 0.41
XRCC3-211ENST00000555055 DNM1Q05193 864 aaKnown RBP17.62■□□□□ 0.41
XRCC3-211ENST00000555055 WASHC4Q2M389 1173 aa17.62■□□□□ 0.41
XRCC3-211ENST00000555055 Q6ZUG5 572 aa17.62■□□□□ 0.41
XRCC3-211ENST00000555055 RNF214Q8ND24 703 aa17.62■□□□□ 0.41
XRCC3-211ENST00000555055 R3HCC1Q9Y3T6 440 aaKnown RBP17.62■□□□□ 0.41
XRCC3-211ENST00000555055 SPATA31A1Q5TZJ5 1347 aa17.61■□□□□ 0.41
XRCC3-211ENST00000555055 ITPK1Q13572 414 aa17.61■□□□□ 0.41
XRCC3-211ENST00000555055 NEK1Q96PY6 1258 aa17.61■□□□□ 0.41
XRCC3-211ENST00000555055 NAP1L2Q9ULW6 460 aaPredicted RBP17.61■□□□□ 0.41
XRCC3-211ENST00000555055 F13A1P00488 732 aa17.61■□□□□ 0.41
XRCC3-211ENST00000555055 CSF1RP07333 972 aa17.61■□□□□ 0.41
XRCC3-211ENST00000555055 HSP90B1P14625 803 aaKnown RBP17.61■□□□□ 0.41
XRCC3-211ENST00000555055 CTSWP56202 376 aa17.61■□□□□ 0.41
XRCC3-211ENST00000555055 CDC37L1Q7L3B6 337 aa17.61■□□□□ 0.41
XRCC3-211ENST00000555055 DDX11Q96FC9 970 aa17.61■□□□□ 0.41
XRCC3-211ENST00000555055 MTMR6Q9Y217 621 aa17.61■□□□□ 0.41
XRCC3-211ENST00000555055 COL14A1Q05707 1796 aaKnown RBP17.61■□□□□ 0.41
XRCC3-211ENST00000555055 CIAO1O76071 339 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms