RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 SASH3O75995 380 aa8.3□□□□□ -1.08
PSEN1-211ENST00000554995 KCNQ4P56696 695 aa8.3□□□□□ -1.08
PSEN1-211ENST00000554995 KIAA0319Q5VV43 1072 aa8.3□□□□□ -1.08
PSEN1-211ENST00000554995 ERMP1Q7Z2K6 904 aa8.3□□□□□ -1.08
PSEN1-211ENST00000554995 GLIS3Q8NEA6 775 aa8.3□□□□□ -1.08
PSEN1-211ENST00000554995 DNAJC2Q99543 621 aaKnown RBP8.3□□□□□ -1.08
PSEN1-211ENST00000554995 KANSL3Q9P2N6 904 aa8.3□□□□□ -1.08
PSEN1-211ENST00000554995 DNMT3LQ9UJW3 386 aa8.3□□□□□ -1.08
PSEN1-211ENST00000554995 KCNH4Q9UQ05 1017 aa8.3□□□□□ -1.08
PSEN1-211ENST00000554995 ERBB4Q15303 1308 aa8.29□□□□□ -1.08
PSEN1-211ENST00000554995 A0A1W2PP55 124 aa8.29□□□□□ -1.08
PSEN1-211ENST00000554995 H3BM21 787 aa8.29□□□□□ -1.08
PSEN1-211ENST00000554995 GSTT1P30711 240 aa8.29□□□□□ -1.08
PSEN1-211ENST00000554995 GTF2F1P35269 517 aaKnown RBP eCLIP8.29□□□□□ -1.08
PSEN1-211ENST00000554995 ARID5AQ03989 594 aa8.29□□□□□ -1.08
PSEN1-211ENST00000554995 EFHC2Q5JST6 749 aa8.29□□□□□ -1.08
PSEN1-211ENST00000554995 ZFP42Q96MM3 310 aa8.29□□□□□ -1.08
PSEN1-211ENST00000554995 COPRSQ9NQ92 184 aa8.29□□□□□ -1.08
PSEN1-211ENST00000554995 LATS2Q9NRM7 1088 aa8.29□□□□□ -1.08
PSEN1-211ENST00000554995 TTF2Q9UNY4 1162 aaKnown RBP8.29□□□□□ -1.08
PSEN1-211ENST00000554995 EDN3P14138 238 aa8.28□□□□□ -1.08
PSEN1-211ENST00000554995 TARSP26639 723 aaKnown RBP8.28□□□□□ -1.08
PSEN1-211ENST00000554995 SFSWAPQ12872 951 aaKnown RBP8.28□□□□□ -1.08
PSEN1-211ENST00000554995 DPH6Q7L8W6 267 aa8.28□□□□□ -1.08
PSEN1-211ENST00000554995 KRT25Q7Z3Z0 450 aa8.28□□□□□ -1.08
PSEN1-211ENST00000554995 ARMC5Q96C12 935 aa8.28□□□□□ -1.08
PSEN1-211ENST00000554995 GSX2Q9BZM3 304 aa8.28□□□□□ -1.08
PSEN1-211ENST00000554995 EHD4Q9H223 541 aa8.28□□□□□ -1.08
PSEN1-211ENST00000554995 TRAK1Q9UPV9 953 aa8.28□□□□□ -1.08
PSEN1-211ENST00000554995 SMARCA5O60264 1052 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-211ENST00000554995 MMP20O60882 483 aa8.27□□□□□ -1.09
PSEN1-211ENST00000554995 FAM157BP0CG42 384 aa8.27□□□□□ -1.09
PSEN1-211ENST00000554995 CCINQ13939 588 aa8.27□□□□□ -1.09
PSEN1-211ENST00000554995 PEAR1Q5VY43 1037 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-211ENST00000554995 C3orf58Q8NDZ4 430 aa8.27□□□□□ -1.09
PSEN1-211ENST00000554995 OR13H1Q8NG92 308 aa8.27□□□□□ -1.09
PSEN1-211ENST00000554995 SENP3-EIF4A1A0A087X0R7 540 aa8.26□□□□□ -1.09
PSEN1-211ENST00000554995 PHF20L1A8MW92 1017 aa8.26□□□□□ -1.09
PSEN1-211ENST00000554995 ATXN7O15265 892 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-211ENST00000554995 EFSO43281 561 aa8.26□□□□□ -1.09
PSEN1-211ENST00000554995 THBS1P07996 1170 aa8.26□□□□□ -1.09
PSEN1-211ENST00000554995 GJA8P48165 433 aa8.26□□□□□ -1.09
PSEN1-211ENST00000554995 PAK2Q13177 524 aa8.26□□□□□ -1.09
PSEN1-211ENST00000554995 LBRQ14739 615 aaKnown RBP8.26□□□□□ -1.09
PSEN1-211ENST00000554995 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.26□□□□□ -1.09
PSEN1-211ENST00000554995 FIGNL1Q6PIW4 674 aa8.26□□□□□ -1.09
PSEN1-211ENST00000554995 VPS37DQ86XT2 251 aa8.26□□□□□ -1.09
PSEN1-211ENST00000554995 NOC4LQ9BVI4 516 aaKnown RBP8.26□□□□□ -1.09
PSEN1-211ENST00000554995 LNPKQ9C0E8 428 aa8.26□□□□□ -1.09
PSEN1-211ENST00000554995 KBTBD4Q9NVX7 518 aa8.26□□□□□ -1.09
PSEN1-211ENST00000554995 CUEDC1Q9NWM3 386 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-211ENST00000554995 PPP4R2Q9NY27 417 aa8.26□□□□□ -1.09
PSEN1-211ENST00000554995 SALL4Q9UJQ4 1053 aa8.26□□□□□ -1.09
PSEN1-211ENST00000554995 DCDC2BA2VCK2 349 aa8.25□□□□□ -1.09
PSEN1-211ENST00000554995 RARAP10276 462 aa8.25□□□□□ -1.09
PSEN1-211ENST00000554995 FCGRTP55899 365 aa8.25□□□□□ -1.09
PSEN1-211ENST00000554995 PRPF40BQ6NWY9 871 aaKnown RBP8.25□□□□□ -1.09
PSEN1-211ENST00000554995 MCF2L2Q86YR7 1114 aa8.25□□□□□ -1.09
PSEN1-211ENST00000554995 SPATA32Q96LK8 384 aa8.25□□□□□ -1.09
PSEN1-211ENST00000554995 ZFATQ9P243 1243 aa8.25□□□□□ -1.09
PSEN1-211ENST00000554995 PCDHGC4Q9Y5F7 938 aa8.25□□□□□ -1.09
PSEN1-211ENST00000554995 KHNYNO15037 678 aaKnown RBP8.24□□□□□ -1.09
PSEN1-211ENST00000554995 RIPOR1Q6ZS17 1223 aa8.24□□□□□ -1.09
PSEN1-211ENST00000554995 RSRP1Q9BUV0 290 aa8.24□□□□□ -1.09
PSEN1-211ENST00000554995 OXCT2Q9BYC2 517 aaPredicted RBP8.24□□□□□ -1.09
PSEN1-211ENST00000554995 ABCB6Q9NP58 842 aa8.24□□□□□ -1.09
PSEN1-211ENST00000554995 FGRP09769 529 aa8.23□□□□□ -1.09
PSEN1-211ENST00000554995 ATF4P18848 351 aaPredicted RBP8.23□□□□□ -1.09
PSEN1-211ENST00000554995 NFKB1P19838 968 aa8.23□□□□□ -1.09
PSEN1-211ENST00000554995 MAP3K10Q02779 954 aa8.23□□□□□ -1.09
PSEN1-211ENST00000554995 TNP2Q05952 138 aa8.23□□□□□ -1.09
PSEN1-211ENST00000554995 UBAP2LQ14157 1087 aaKnown RBP8.23□□□□□ -1.09
PSEN1-211ENST00000554995 GRIN2CQ14957 1233 aa8.23□□□□□ -1.09
PSEN1-211ENST00000554995 CCDC85BQ15834 202 aaPredicted RBP8.23□□□□□ -1.09
PSEN1-211ENST00000554995 TMEM151AQ8N4L1 468 aa8.23□□□□□ -1.09
PSEN1-211ENST00000554995 GPRASP2Q96D09 838 aa8.23□□□□□ -1.09
PSEN1-211ENST00000554995 PUS7Q96PZ0 661 aaKnown RBP8.23□□□□□ -1.09
PSEN1-211ENST00000554995 LIN7BQ9HAP6 207 aa8.23□□□□□ -1.09
PSEN1-211ENST00000554995 STRN4Q9NRL3 753 aa8.23□□□□□ -1.09
PSEN1-211ENST00000554995 TMEM238LA0A1B0GVL6 79 aa8.22□□□□□ -1.09
PSEN1-211ENST00000554995 MAN1A2O60476 641 aa8.22□□□□□ -1.09
PSEN1-211ENST00000554995 MAPTP10636 758 aaKnown RBP8.22□□□□□ -1.09
PSEN1-211ENST00000554995 LAMC2Q13753 1193 aa8.22□□□□□ -1.09
PSEN1-211ENST00000554995 COL13A1Q5TAT6 717 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-211ENST00000554995 GIMAP6Q6P9H5 292 aa8.22□□□□□ -1.09
PSEN1-211ENST00000554995 CNTNAP3BQ96NU0 1288 aa8.22□□□□□ -1.09
PSEN1-211ENST00000554995 PNMA5Q96PV4 448 aa8.22□□□□□ -1.09
PSEN1-211ENST00000554995 TCF12Q99081 682 aa8.22□□□□□ -1.09
PSEN1-211ENST00000554995 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.22□□□□□ -1.095e-7■■■□□ 18.9
PSEN1-211ENST00000554995 TRIM56Q9BRZ2 755 aaKnown RBP8.22□□□□□ -1.09
PSEN1-211ENST00000554995 CNTNAP3Q9BZ76 1288 aa8.22□□□□□ -1.09
PSEN1-211ENST00000554995 NUCKS1Q9H1E3 243 aaKnown RBP8.22□□□□□ -1.09
PSEN1-211ENST00000554995 TLR7Q9NYK1 1049 aaKnown RBP8.22□□□□□ -1.09
PSEN1-211ENST00000554995 PPM1HQ9ULR3 514 aa8.22□□□□□ -1.09
PSEN1-211ENST00000554995 AKAP2Q9Y2D5 859 aa8.22□□□□□ -1.09
PSEN1-211ENST00000554995 F6X3S4 739 aa8.21□□□□□ -1.1
PSEN1-211ENST00000554995 KIF4AO95239 1232 aa8.21□□□□□ -1.1
PSEN1-211ENST00000554995 PSAPP07602 524 aa8.21□□□□□ -1.1
PSEN1-211ENST00000554995 XRCC5P13010 732 aaKnown RBP8.21□□□□□ -1.1
PSEN1-211ENST00000554995 ACPPP15309 386 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms