RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 FAM177BA6PVY3 158 aa4.59□□□□□ -1.67
IFT43-208ENST00000554423 TNFRSF10BO14763 440 aa4.59□□□□□ -1.67
IFT43-208ENST00000554423 DYRK3O43781 588 aa4.59□□□□□ -1.67
IFT43-208ENST00000554423 APBA3O96018 575 aa4.59□□□□□ -1.67
IFT43-208ENST00000554423 GHRHP01286 108 aa4.59□□□□□ -1.67
IFT43-208ENST00000554423 SPATA31C1P0DKV0 1188 aa4.59□□□□□ -1.67
IFT43-208ENST00000554423 SOX18P35713 384 aa4.59□□□□□ -1.67
IFT43-208ENST00000554423 FKBP4Q02790 459 aaKnown RBP eCLIP4.59□□□□□ -1.67
IFT43-208ENST00000554423 PDE12Q6L8Q7 609 aaKnown RBP4.59□□□□□ -1.67
IFT43-208ENST00000554423 PSAPL1Q6NUJ1 521 aa4.59□□□□□ -1.67
IFT43-208ENST00000554423 GPR152Q8TDT2 470 aa4.59□□□□□ -1.67
IFT43-208ENST00000554423 TTC9Q92623 222 aa4.59□□□□□ -1.67
IFT43-208ENST00000554423 PMEPA1Q969W9 287 aa4.59□□□□□ -1.67
IFT43-208ENST00000554423 JPH1Q9HDC5 661 aaPredicted RBP4.59□□□□□ -1.67
IFT43-208ENST00000554423 SEPT3Q9UH03 358 aa4.59□□□□□ -1.67
IFT43-208ENST00000554423 LOC102724428A0A0B4J2F2 783 aa4.58□□□□□ -1.68
IFT43-208ENST00000554423 CPB1P15086 417 aa4.58□□□□□ -1.68
IFT43-208ENST00000554423 HOXB4P17483 251 aaPredicted RBP4.58□□□□□ -1.68
IFT43-208ENST00000554423 MZF1P28698 734 aaPredicted RBP4.58□□□□□ -1.68
IFT43-208ENST00000554423 SCNN1AP37088 669 aa4.58□□□□□ -1.68
IFT43-208ENST00000554423 SIK1P57059 783 aa4.58□□□□□ -1.68
IFT43-208ENST00000554423 EHHADHQ08426 723 aa4.58□□□□□ -1.68
IFT43-208ENST00000554423 HYAL2Q12891 473 aa4.58□□□□□ -1.68
IFT43-208ENST00000554423 C20orf204Q6ZNR8 217 aa4.58□□□□□ -1.68
IFT43-208ENST00000554423 CAPN12Q6ZSI9 719 aa4.58□□□□□ -1.68
IFT43-208ENST00000554423 ZFATQ9P243 1243 aa4.58□□□□□ -1.68
IFT43-208ENST00000554423 STARD13Q9Y3M8 1113 aa4.58□□□□□ -1.68
IFT43-208ENST00000554423 KCNMB2Q9Y691 235 aa4.58□□□□□ -1.68
IFT43-208ENST00000554423 ABL1P00519 1130 aa4.57□□□□□ -1.68
IFT43-208ENST00000554423 ALBP02768 609 aa4.57□□□□□ -1.68
IFT43-208ENST00000554423 EIF2AK2P19525 551 aaKnown RBP4.57□□□□□ -1.68
IFT43-208ENST00000554423 ZNF438Q7Z4V0 828 aa4.57□□□□□ -1.68
IFT43-208ENST00000554423 DTWD1Q8N5C7 304 aa4.57□□□□□ -1.68
IFT43-208ENST00000554423 CCER1Q8TC90 406 aaPredicted RBP4.57□□□□□ -1.68
IFT43-208ENST00000554423 NUDT8Q8WV74 236 aa4.57□□□□□ -1.68
IFT43-208ENST00000554423 MUC3BQ9H195 1237 aa4.57□□□□□ -1.68
IFT43-208ENST00000554423 ABI2Q9NYB9 513 aaPredicted RBP4.57□□□□□ -1.68
IFT43-208ENST00000554423 SLAIN2Q9P270 581 aa4.57□□□□□ -1.68
IFT43-208ENST00000554423 EGFL7Q9UHF1 273 aa4.57□□□□□ -1.68
IFT43-208ENST00000554423 USP20Q9Y2K6 914 aa4.57□□□□□ -1.68
IFT43-208ENST00000554423 MMP20O60882 483 aa4.56□□□□□ -1.68
IFT43-208ENST00000554423 NEFLP07196 543 aa4.56□□□□□ -1.68
IFT43-208ENST00000554423 HOXD8P13378 290 aaPredicted RBP4.56□□□□□ -1.68
IFT43-208ENST00000554423 EIF1AXP47813 144 aaKnown RBP4.56□□□□□ -1.68
IFT43-208ENST00000554423 NRG1Q02297 640 aaPredicted RBP4.56□□□□□ -1.68
IFT43-208ENST00000554423 DNM1Q05193 864 aaKnown RBP4.56□□□□□ -1.68
IFT43-208ENST00000554423 C8orf34Q49A92 452 aa4.56□□□□□ -1.68
IFT43-208ENST00000554423 XKR5Q6UX68 686 aa4.56□□□□□ -1.68
IFT43-208ENST00000554423 WFDC8Q8IUA0 241 aa4.56□□□□□ -1.68
IFT43-208ENST00000554423 OR13H1Q8NG92 308 aa4.56□□□□□ -1.68
IFT43-208ENST00000554423 EDEM1Q92611 657 aa4.56□□□□□ -1.68
IFT43-208ENST00000554423 NUDT16Q96DE0 195 aaKnown RBP4.56□□□□□ -1.68
IFT43-208ENST00000554423 TRIM11Q96F44 468 aa4.56□□□□□ -1.68
IFT43-208ENST00000554423 FMNL2Q96PY5 1086 aa4.56□□□□□ -1.68
IFT43-208ENST00000554423 ELP3Q9H9T3 547 aa4.56□□□□□ -1.68
IFT43-208ENST00000554423 TPSG1Q9NRR2 321 aa4.56□□□□□ -1.68
IFT43-208ENST00000554423 C9orf172C9J069 976 aa4.55□□□□□ -1.68
IFT43-208ENST00000554423 ZBTB39O15060 712 aa4.55□□□□□ -1.68
IFT43-208ENST00000554423 SMNDC1O75940 238 aaKnown RBP eCLIP4.55□□□□□ -1.68
IFT43-208ENST00000554423 NID1P14543 1247 aa4.55□□□□□ -1.68
IFT43-208ENST00000554423 ELNP15502 786 aa4.55□□□□□ -1.68
IFT43-208ENST00000554423 NPR3P17342 541 aa4.55□□□□□ -1.68
IFT43-208ENST00000554423 GRNP28799 593 aaKnown RBP4.55□□□□□ -1.68
IFT43-208ENST00000554423 AFF1P51825 1210 aaKnown RBP4.55□□□□□ -1.68
IFT43-208ENST00000554423 MLLT1Q03111 559 aaPredicted RBP4.55□□□□□ -1.68
IFT43-208ENST00000554423 PERM1Q5SV97 790 aa4.55□□□□□ -1.68
IFT43-208ENST00000554423 MSL1Q68DK7 614 aa4.55□□□□□ -1.68
IFT43-208ENST00000554423 NCAPG2Q86XI2 1143 aa4.55□□□□□ -1.68
IFT43-208ENST00000554423 MAP4K3Q8IVH8 894 aa4.55□□□□□ -1.68
IFT43-208ENST00000554423 PLD4Q96BZ4 506 aa4.55□□□□□ -1.68
IFT43-208ENST00000554423 SMG9Q9H0W8 520 aaKnown RBP4.55□□□□□ -1.68
IFT43-208ENST00000554423 SRA1Q9HD15 236 aaKnown RBP4.55□□□□□ -1.68
IFT43-208ENST00000554423 COL17A1Q9UMD9 1497 aaPredicted RBP4.55□□□□□ -1.68
IFT43-208ENST00000554423 ZBTB42B2RXF5 422 aa4.54□□□□□ -1.68
IFT43-208ENST00000554423 PDGFAP04085 211 aa4.54□□□□□ -1.68
IFT43-208ENST00000554423 CES1P23141 567 aa4.54□□□□□ -1.68
IFT43-208ENST00000554423 MPSTP25325 297 aa4.54□□□□□ -1.68
IFT43-208ENST00000554423 HFE2Q6ZVN8 426 aa4.54□□□□□ -1.68
IFT43-208ENST00000554423 GLYCTKQ8IVS8 523 aa4.54□□□□□ -1.68
IFT43-208ENST00000554423 DMRTC2Q8IXT2 367 aaPredicted RBP4.54□□□□□ -1.68
IFT43-208ENST00000554423 RETREG2Q8NC44 543 aa4.54□□□□□ -1.68
IFT43-208ENST00000554423 NSUN5Q96P11 429 aaKnown RBP4.54□□□□□ -1.68
IFT43-208ENST00000554423 KRTAP17-1Q9BYP8 105 aa4.54□□□□□ -1.68
IFT43-208ENST00000554423 BRPF3Q9ULD4 1205 aa4.54□□□□□ -1.68
IFT43-208ENST00000554423 A0A0A0MRY4 1105 aa4.53□□□□□ -1.68
IFT43-208ENST00000554423 J3QW42 95 aa4.53□□□□□ -1.68
IFT43-208ENST00000554423 NDUFB5O43674 189 aa4.53□□□□□ -1.68
IFT43-208ENST00000554423 EIF4EBP3O60516 100 aaPredicted RBP4.53□□□□□ -1.68
IFT43-208ENST00000554423 ICMTO60725 284 aa4.53□□□□□ -1.68
IFT43-208ENST00000554423 PDE3BQ13370 1112 aa4.53□□□□□ -1.68
IFT43-208ENST00000554423 TRIP4Q15650 581 aaPredicted RBP4.53□□□□□ -1.68
IFT43-208ENST00000554423 PHLDB3Q6NSJ2 640 aa4.53□□□□□ -1.68
IFT43-208ENST00000554423 FAM117BQ6P1L5 589 aa4.53□□□□□ -1.68
IFT43-208ENST00000554423 C8orf86Q6ZUL3 223 aa4.53□□□□□ -1.68
IFT43-208ENST00000554423 ATCAYQ86WG3 371 aa4.53□□□□□ -1.68
IFT43-208ENST00000554423 CITED4Q96RK1 184 aa4.53□□□□□ -1.68
IFT43-208ENST00000554423 LPIN3Q9BQK8 851 aa4.53□□□□□ -1.68
IFT43-208ENST00000554423 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
IFT43-208ENST00000554423 PATL2C9JE40 543 aaKnown RBP4.52□□□□□ -1.69
IFT43-208ENST00000554423 BRD1O95696 1058 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms