RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 MYOM3Q5VTT5 1437 aa8.79□□□□□ -1
ATXN3-226ENST00000554350 RREB1Q92766 1687 aa8.78□□□□□ -1
ATXN3-226ENST00000554350 NWD2Q9ULI1 1742 aa8.78□□□□□ -1
ATXN3-226ENST00000554350 OIP5O43482 229 aa8.78□□□□□ -1
ATXN3-226ENST00000554350 HSPA6P17066 643 aa8.78□□□□□ -1
ATXN3-226ENST00000554350 MCM6Q14566 821 aa8.78□□□□□ -1
ATXN3-226ENST00000554350 GNASQ5JWF2 1037 aa8.78□□□□□ -1
ATXN3-226ENST00000554350 GPAT2Q6NUI2 795 aa8.78□□□□□ -1
ATXN3-226ENST00000554350 TMEM214Q6NUQ4 689 aaKnown RBP8.78□□□□□ -1
ATXN3-226ENST00000554350 ZNF295-AS1Q8N0V1 137 aa8.78□□□□□ -1
ATXN3-226ENST00000554350 NDFIP2Q9NV92 336 aa8.78□□□□□ -1
ATXN3-226ENST00000554350 MYOM1P52179 1685 aa8.78□□□□□ -1
ATXN3-226ENST00000554350 NRXN3Q9Y4C0 1643 aa8.77□□□□□ -1.01
ATXN3-226ENST00000554350 ABL2P42684 1182 aa8.77□□□□□ -1.01
ATXN3-226ENST00000554350 TLR1Q15399 786 aa8.77□□□□□ -1.01
ATXN3-226ENST00000554350 RHBDD1Q8TEB9 315 aa8.77□□□□□ -1.01
ATXN3-226ENST00000554350 OXCT2Q9BYC2 517 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-226ENST00000554350 PRM3Q9NNZ6 103 aa8.77□□□□□ -1.01
ATXN3-226ENST00000554350 BTG4Q9NY30 223 aa8.77□□□□□ -1.01
ATXN3-226ENST00000554350 SPATA31A3Q5VYP0 1347 aa8.77□□□□□ -1.01
ATXN3-226ENST00000554350 SHISA8B8ZZ34 492 aa8.76□□□□□ -1.01
ATXN3-226ENST00000554350 C2CD2LO14523 706 aa8.76□□□□□ -1.01
ATXN3-226ENST00000554350 INHAP05111 366 aa8.76□□□□□ -1.01
ATXN3-226ENST00000554350 LBRQ14739 615 aaKnown RBP8.76□□□□□ -1.01
ATXN3-226ENST00000554350 KLRG1Q96E93 195 aa8.76□□□□□ -1.01
ATXN3-226ENST00000554350 DNAAF2Q9NVR5 837 aaKnown RBP8.76□□□□□ -1.01
ATXN3-226ENST00000554350 HCN2Q9UL51 889 aa8.76□□□□□ -1.01
ATXN3-226ENST00000554350 ANKRD30AQ9BXX3 1397 aa8.75□□□□□ -1.01
ATXN3-226ENST00000554350 MAP2K3P46734 347 aa8.75□□□□□ -1.01
ATXN3-226ENST00000554350 GDF10P55107 478 aa8.75□□□□□ -1.01
ATXN3-226ENST00000554350 KRT28Q7Z3Y7 464 aa8.75□□□□□ -1.01
ATXN3-226ENST00000554350 TNS4Q8IZW8 715 aa8.75□□□□□ -1.01
ATXN3-226ENST00000554350 PLPP7Q8NBV4 271 aa8.75□□□□□ -1.01
ATXN3-226ENST00000554350 DCAF5Q96JK2 942 aa8.75□□□□□ -1.01
ATXN3-226ENST00000554350 CRISPLD1Q9H336 500 aa8.75□□□□□ -1.01
ATXN3-226ENST00000554350 DLC1Q96QB1 1528 aa8.75□□□□□ -1.01
ATXN3-226ENST00000554350 ROBO2Q9HCK4 1378 aa8.74□□□□□ -1.01
ATXN3-226ENST00000554350 ABCC5O15440 1437 aa8.74□□□□□ -1.01
ATXN3-226ENST00000554350 PIK3CDO00329 1044 aa8.74□□□□□ -1.01
ATXN3-226ENST00000554350 ATP4AP20648 1035 aa8.74□□□□□ -1.01
ATXN3-226ENST00000554350 PRELPP51888 382 aa8.74□□□□□ -1.01
ATXN3-226ENST00000554350 SNRPNP63162 240 aaKnown RBP8.74□□□□□ -1.01
ATXN3-226ENST00000554350 PDE3BQ13370 1112 aa8.74□□□□□ -1.01
ATXN3-226ENST00000554350 COL13A1Q5TAT6 717 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-226ENST00000554350 NEDD1Q8NHV4 660 aa8.74□□□□□ -1.01
ATXN3-226ENST00000554350 PDGFDQ9GZP0 370 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-226ENST00000554350 NSFL1CQ9UNZ2 370 aaKnown RBP8.74□□□□□ -1.01
ATXN3-226ENST00000554350 CROCC2H7BZ55 1655 aa8.74□□□□□ -1.01
ATXN3-226ENST00000554350 SPATA31A5Q5VU36 1347 aa8.74□□□□□ -1.01
ATXN3-226ENST00000554350 SPATA31A7Q8IWB4 1347 aa8.74□□□□□ -1.01
ATXN3-226ENST00000554350 TMEM229AB2RXF0 380 aa8.73□□□□□ -1.01
ATXN3-226ENST00000554350 BNIP3LO60238 219 aa8.73□□□□□ -1.01
ATXN3-226ENST00000554350 IGHA1P01876 353 aa8.73□□□□□ -1.01
ATXN3-226ENST00000554350 HOXB4P17483 251 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-226ENST00000554350 FOXK2Q01167 660 aa8.73□□□□□ -1.01
ATXN3-226ENST00000554350 WASHC4Q2M389 1173 aa8.73□□□□□ -1.01
ATXN3-226ENST00000554350 MAP7D1Q3KQU3 841 aa8.73□□□□□ -1.01
ATXN3-226ENST00000554350 PLA2G4EQ3MJ16 856 aa8.73□□□□□ -1.01
ATXN3-226ENST00000554350 BEND7Q8N7W2 519 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-226ENST00000554350 ABHD17AQ96GS6 310 aa8.73□□□□□ -1.01
ATXN3-226ENST00000554350 USP3Q9Y6I4 520 aa8.73□□□□□ -1.01
ATXN3-226ENST00000554350 UTRNP46939 3433 aa8.73□□□□□ -1.01
ATXN3-226ENST00000554350 CCDC144AA2RUR9 1427 aa8.72□□□□□ -1.01
ATXN3-226ENST00000554350 PHF20L1A8MW92 1017 aa8.72□□□□□ -1.01
ATXN3-226ENST00000554350 GTF2E1P29083 439 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-226ENST00000554350 PLA2G4AP47712 749 aa8.72□□□□□ -1.01
ATXN3-226ENST00000554350 PSME1Q06323 249 aa8.72□□□□□ -1.01
ATXN3-226ENST00000554350 SIRT1Q96EB6 747 aa8.72□□□□□ -1.01
ATXN3-226ENST00000554350 ATXN7L1Q9ULK2 861 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-226ENST00000554350 IQSEC3Q9UPP2 1182 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-226ENST00000554350 PHF24Q9UPV7 400 aa8.72□□□□□ -1.01
ATXN3-226ENST00000554350 COG6Q9Y2V7 657 aa8.72□□□□□ -1.01
ATXN3-226ENST00000554350 TNS3Q68CZ2 1445 aa8.71□□□□□ -1.01
ATXN3-226ENST00000554350 CSB-PGBD3P0DP91 1061 aa8.71□□□□□ -1.02
ATXN3-226ENST00000554350 SMTNP53814 917 aa8.71□□□□□ -1.02
ATXN3-226ENST00000554350 CTBSQ01459 385 aa8.71□□□□□ -1.02
ATXN3-226ENST00000554350 PGBD3Q8N328 593 aa8.71□□□□□ -1.02
ATXN3-226ENST00000554350 ZNF526Q8TF50 670 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-226ENST00000554350 SLC4A9Q96Q91 983 aa8.71□□□□□ -1.02
ATXN3-226ENST00000554350 USP35Q9P2H5 1018 aa8.71□□□□□ -1.02
ATXN3-226ENST00000554350 PCDHGA11Q9Y5H2 935 aa8.71□□□□□ -1.02
ATXN3-226ENST00000554350 THSD7AQ9UPZ6 1657 aa8.71□□□□□ -1.02
ATXN3-226ENST00000554350 NRAPQ86VF7 1730 aa8.71□□□□□ -1.02
ATXN3-226ENST00000554350 SHANK3Q9BYB0 1731 aa8.71□□□□□ -1.02
ATXN3-226ENST00000554350 DAPK1P53355 1430 aa8.71□□□□□ -1.02
ATXN3-226ENST00000554350 SOX11P35716 441 aa8.7□□□□□ -1.02
ATXN3-226ENST00000554350 MTFR1Q15390 333 aa8.7□□□□□ -1.02
ATXN3-226ENST00000554350 EFHC2Q5JST6 749 aa8.7□□□□□ -1.02
ATXN3-226ENST00000554350 GALNT6Q8NCL4 622 aa8.7□□□□□ -1.02
ATXN3-226ENST00000554350 ARXQ96QS3 562 aa8.7□□□□□ -1.02
ATXN3-226ENST00000554350 CASZ1Q86V15 1759 aa8.7□□□□□ -1.02
ATXN3-226ENST00000554350 HFM1A2PYH4 1435 aa8.7□□□□□ -1.02
ATXN3-226ENST00000554350 CDC42BPGQ6DT37 1551 aa8.69□□□□□ -1.02
ATXN3-226ENST00000554350 FGFR3P22607 806 aa8.69□□□□□ -1.02
ATXN3-226ENST00000554350 SEMA3FQ13275 785 aa8.69□□□□□ -1.02
ATXN3-226ENST00000554350 TBC1D9Q6ZT07 1266 aa8.69□□□□□ -1.02
ATXN3-226ENST00000554350 PODNQ7Z5L7 613 aa8.69□□□□□ -1.02
ATXN3-226ENST00000554350 ZCCHC2Q9C0B9 1178 aaKnown RBP8.69□□□□□ -1.02
ATXN3-226ENST00000554350 ALG2Q9H553 416 aa8.69□□□□□ -1.02
ATXN3-226ENST00000554350 STRN4Q9NRL3 753 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms